RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 LIFRP42702 1097 aa20.75■□□□□ 0.91
PFN1-201ENST00000225655 RBM25P49756 843 aaKnown RBP20.75■□□□□ 0.91
PFN1-201ENST00000225655 CHMP4BP1P59074 171 aa20.75■□□□□ 0.91
PFN1-201ENST00000225655 BFSP2Q13515 415 aa20.75■□□□□ 0.91
PFN1-201ENST00000225655 FCHSD1Q86WN1 690 aa20.75■□□□□ 0.91
PFN1-201ENST00000225655 DHX37Q8IY37 1157 aaKnown RBP20.75■□□□□ 0.91
PFN1-201ENST00000225655 RETREG2Q8NC44 543 aa20.75■□□□□ 0.91
PFN1-201ENST00000225655 SLC4A7Q9Y6M7 1214 aa20.75■□□□□ 0.91
PFN1-201ENST00000225655 TGFB3P10600 412 aa20.74■□□□□ 0.91
PFN1-201ENST00000225655 HOXD8P13378 290 aaPredicted RBP20.74■□□□□ 0.91
PFN1-201ENST00000225655 EXOSC10Q01780 885 aaKnown RBP20.74■□□□□ 0.91
PFN1-201ENST00000225655 CELF3Q5SZQ8 465 aaKnown RBP20.74■□□□□ 0.91
PFN1-201ENST00000225655 MYSM1Q5VVJ2 828 aa20.74■□□□□ 0.91
PFN1-201ENST00000225655 DEFB128Q7Z7B8 93 aa20.74■□□□□ 0.91
PFN1-201ENST00000225655 IL27Q8NEV9 243 aa20.74■□□□□ 0.91
PFN1-201ENST00000225655 IL17RAQ96F46 866 aa20.74■□□□□ 0.91
PFN1-201ENST00000225655 CTAGE1Q96RT6 745 aa20.74■□□□□ 0.91
PFN1-201ENST00000225655 LZTS2Q9BRK4 669 aa20.74■□□□□ 0.91
PFN1-201ENST00000225655 MYL10Q9BUA6 226 aa20.74■□□□□ 0.91
PFN1-201ENST00000225655 KATNAL1Q9BW62 490 aa20.74■□□□□ 0.91
PFN1-201ENST00000225655 PDRG1Q9NUG6 133 aa20.74■□□□□ 0.91
PFN1-201ENST00000225655 SLC12A7Q9Y666 1083 aa20.74■□□□□ 0.91
PFN1-201ENST00000225655 FRMPD4Q14CM0 1322 aa20.74■□□□□ 0.91
PFN1-201ENST00000225655 F2P00734 622 aa20.73■□□□□ 0.91
PFN1-201ENST00000225655 CALM1P0DP23 149 aa20.73■□□□□ 0.91
PFN1-201ENST00000225655 CALM2P0DP24 149 aa20.73■□□□□ 0.91
PFN1-201ENST00000225655 CALM3P0DP25 149 aa20.73■□□□□ 0.91
PFN1-201ENST00000225655 GDF6Q6KF10 455 aaPredicted RBP20.73■□□□□ 0.91
PFN1-201ENST00000225655 CCDC155Q8N6L0 562 aa20.73■□□□□ 0.91
PFN1-201ENST00000225655 CAGE1Q8TC20 777 aa20.73■□□□□ 0.91
PFN1-201ENST00000225655 PIBF1Q8WXW3 757 aa20.73■□□□□ 0.91
PFN1-201ENST00000225655 RRP36Q96EU6 259 aaKnown RBP20.73■□□□□ 0.91
PFN1-201ENST00000225655 TRIP12Q14669 1992 aaPredicted RBP20.73■□□□□ 0.91
PFN1-201ENST00000225655 CUL9Q8IWT3 2517 aa20.73■□□□□ 0.91
PFN1-201ENST00000225655 ZBBXA8MT70 800 aa20.72■□□□□ 0.91
PFN1-201ENST00000225655 HAS3O00219 553 aa20.72■□□□□ 0.91
PFN1-201ENST00000225655 PPFIA4O75335 1185 aa20.72■□□□□ 0.91
PFN1-201ENST00000225655 ACTN1P12814 892 aa20.72■□□□□ 0.91
PFN1-201ENST00000225655 UBA1P22314 1058 aaKnown RBP20.72■□□□□ 0.91
PFN1-201ENST00000225655 PSEN2P49810 448 aa20.72■□□□□ 0.91
PFN1-201ENST00000225655 GNAQP50148 359 aa20.72■□□□□ 0.91
PFN1-201ENST00000225655 SP2Q02086 613 aa20.72■□□□□ 0.91
PFN1-201ENST00000225655 ANKRD1Q15327 319 aa20.72■□□□□ 0.91
PFN1-201ENST00000225655 C7orf31Q8N865 590 aa20.72■□□□□ 0.91
PFN1-201ENST00000225655 LRRC2Q9BYS8 371 aa20.72■□□□□ 0.91
PFN1-201ENST00000225655 UPF3BQ9BZI7 483 aaKnown RBP20.72■□□□□ 0.91
PFN1-201ENST00000225655 GTF2IRD1Q9UHL9 959 aa20.72■□□□□ 0.91
PFN1-201ENST00000225655 YBX2Q9Y2T7 364 aaKnown RBP20.72■□□□□ 0.91
PFN1-201ENST00000225655 A0A0C4DFX4 3053 aa20.71■□□□□ 0.91
PFN1-201ENST00000225655 STAM2O75886 525 aa20.71■□□□□ 0.91
PFN1-201ENST00000225655 GGPS1O95749 300 aa20.71■□□□□ 0.91
PFN1-201ENST00000225655 ZNF286BP0CG31 522 aa20.71■□□□□ 0.91
PFN1-201ENST00000225655 CPA1P15085 419 aa20.71■□□□□ 0.91
PFN1-201ENST00000225655 ATP2A2P16615 1042 aaKnown RBP20.71■□□□□ 0.91
PFN1-201ENST00000225655 RBL2Q08999 1139 aa20.71■□□□□ 0.91
PFN1-201ENST00000225655 COL9A3Q14050 684 aaPredicted RBP20.71■□□□□ 0.91
PFN1-201ENST00000225655 MFSD10Q14728 455 aa20.71■□□□□ 0.91
PFN1-201ENST00000225655 HSDL1Q3SXM5 330 aa20.71■□□□□ 0.91
PFN1-201ENST00000225655 Q6ZUG5 572 aa20.71■□□□□ 0.91
PFN1-201ENST00000225655 SGMS1Q86VZ5 419 aa20.71■□□□□ 0.91
PFN1-201ENST00000225655 AFAP1L1Q8TED9 768 aa20.71■□□□□ 0.91
PFN1-201ENST00000225655 TCEANC2Q96MN5 208 aa20.71■□□□□ 0.91
PFN1-201ENST00000225655 SPATA33Q96N06 139 aa20.71■□□□□ 0.91
PFN1-201ENST00000225655 TBC1D32Q96NH3 1257 aa20.71■□□□□ 0.91
PFN1-201ENST00000225655 NKX2-4Q9H2Z4 354 aa20.71■□□□□ 0.91
PFN1-201ENST00000225655 SLC28A3Q9HAS3 691 aa20.71■□□□□ 0.91
PFN1-201ENST00000225655 HDAC6Q9UBN7 1215 aa20.71■□□□□ 0.91
PFN1-201ENST00000225655 SEC63Q9UGP8 760 aaKnown RBP20.71■□□□□ 0.91
PFN1-201ENST00000225655 PCDHA11Q9Y5I1 949 aa20.71■□□□□ 0.91
PFN1-201ENST00000225655 UNC80Q8N2C7 3258 aa20.7■□□□□ 0.9
PFN1-201ENST00000225655 PIK3CDO00329 1044 aa20.7■□□□□ 0.9
PFN1-201ENST00000225655 KIAA0753Q2KHM9 967 aa20.7■□□□□ 0.9
PFN1-201ENST00000225655 GNPTABQ3T906 1256 aa20.7■□□□□ 0.9
PFN1-201ENST00000225655 FBXL16Q8N461 479 aa20.7■□□□□ 0.9
PFN1-201ENST00000225655 SRBD1Q8N5C6 995 aaKnown RBP20.7■□□□□ 0.9
PFN1-201ENST00000225655 ZFP91Q96JP5 570 aaPredicted RBP20.7■□□□□ 0.9
PFN1-201ENST00000225655 INPP4AQ96PE3 977 aaPredicted RBP20.7■□□□□ 0.9
PFN1-201ENST00000225655 NAP1L2Q9ULW6 460 aaPredicted RBP20.7■□□□□ 0.9
PFN1-201ENST00000225655 MYO9BQ13459 2157 aa20.69■□□□□ 0.9
PFN1-201ENST00000225655 PLEKHA8P1O95397 391 aa20.69■□□□□ 0.9
PFN1-201ENST00000225655 NEK4P51957 841 aa20.69■□□□□ 0.9
PFN1-201ENST00000225655 RABGGTBP53611 331 aa20.69■□□□□ 0.9
PFN1-201ENST00000225655 MRPS9P82933 396 aaKnown RBP20.69■□□□□ 0.9
PFN1-201ENST00000225655 RABEP1Q15276 862 aa20.69■□□□□ 0.9
PFN1-201ENST00000225655 DHX38Q92620 1227 aaKnown RBP20.69■□□□□ 0.9
PFN1-201ENST00000225655 GPKOWQ92917 476 aaPredicted RBP eCLIP20.69■□□□□ 0.9
PFN1-201ENST00000225655 BRF1Q92994 677 aa20.69■□□□□ 0.9
PFN1-201ENST00000225655 GAS2L1Q99501 681 aaPredicted RBP20.69■□□□□ 0.9
PFN1-201ENST00000225655 ALG1Q9BT22 464 aa20.69■□□□□ 0.9
PFN1-201ENST00000225655 FTOQ9C0B1 505 aaKnown RBP eCLIP20.69■□□□□ 0.9
PFN1-201ENST00000225655 PRDM12Q9H4Q4 367 aa20.69■□□□□ 0.9
PFN1-201ENST00000225655 MLXIPQ9HAP2 919 aa20.69■□□□□ 0.9
PFN1-201ENST00000225655 TET1Q8NFU7 2136 aa20.69■□□□□ 0.9
PFN1-201ENST00000225655 SORBS3O60504 671 aa20.68■□□□□ 0.9
PFN1-201ENST00000225655 PARNO95453 639 aaKnown RBP20.68■□□□□ 0.9
PFN1-201ENST00000225655 SELPP16109 830 aa20.68■□□□□ 0.9
PFN1-201ENST00000225655 ICAM3P32942 547 aa20.68■□□□□ 0.9
PFN1-201ENST00000225655 RCAN1P53805 252 aa20.68■□□□□ 0.9
PFN1-201ENST00000225655 LRRC8DQ7L1W4 858 aa20.68■□□□□ 0.9
PFN1-201ENST00000225655 SMARCC2Q8TAQ2 1214 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms