RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 FERMT3Q86UX7 667 aa18.71■□□□□ 0.59
LIM2-201ENST00000221973 TNFRSF25Q93038 417 aa18.71■□□□□ 0.59
LIM2-201ENST00000221973 FOXP1Q9H334 677 aaPredicted RBP18.71■□□□□ 0.59
LIM2-201ENST00000221973 PXMP2Q9NR77 195 aa18.71■□□□□ 0.59
LIM2-201ENST00000221973 ADD3Q9UEY8 706 aaKnown RBP18.71■□□□□ 0.59
LIM2-201ENST00000221973 ASTN1O14525 1302 aa18.71■□□□□ 0.59
LIM2-201ENST00000221973 SYNRGQ9UMZ2 1314 aa18.71■□□□□ 0.59
LIM2-201ENST00000221973 MCM3APO60318 1980 aa18.7■□□□□ 0.58
LIM2-201ENST00000221973 A0A1W2PQ45 241 aaPredicted RBP18.7■□□□□ 0.58
LIM2-201ENST00000221973 A0A1W2PQY0 241 aa18.7■□□□□ 0.58
LIM2-201ENST00000221973 FAM205CA6NFA0 338 aa18.7■□□□□ 0.58
LIM2-201ENST00000221973 ALDH5A1P51649 535 aaPredicted RBP18.7■□□□□ 0.58
LIM2-201ENST00000221973 IRX5P78411 483 aaPredicted RBP18.7■□□□□ 0.58
LIM2-201ENST00000221973 SHHQ15465 462 aa18.7■□□□□ 0.58
LIM2-201ENST00000221973 CCSAPQ6IQ19 270 aaPredicted RBP18.7■□□□□ 0.58
LIM2-201ENST00000221973 ZNF467Q7Z7K2 595 aaPredicted RBP18.7■□□□□ 0.58
LIM2-201ENST00000221973 RNF180Q86T96 592 aa18.7■□□□□ 0.58
LIM2-201ENST00000221973 SLC17A8Q8NDX2 589 aa18.7■□□□□ 0.58
LIM2-201ENST00000221973 KLHDC9Q8NEP7 349 aa18.7■□□□□ 0.58
LIM2-201ENST00000221973 DNERQ8NFT8 737 aa18.7■□□□□ 0.58
LIM2-201ENST00000221973 NSUN6Q8TEA1 469 aaKnown RBP18.7■□□□□ 0.58
LIM2-201ENST00000221973 BADQ92934 168 aa18.7■□□□□ 0.58
LIM2-201ENST00000221973 EHMT1Q9H9B1 1298 aa18.7■□□□□ 0.58
LIM2-201ENST00000221973 PRKAG2Q9UGJ0 569 aa18.7■□□□□ 0.58
LIM2-201ENST00000221973 CNPY2Q9Y2B0 182 aa18.7■□□□□ 0.58
LIM2-201ENST00000221973 STXBP5LQ9Y2K9 1186 aa18.7■□□□□ 0.58
LIM2-201ENST00000221973 DDX49Q9Y6V7 483 aaKnown RBP18.7■□□□□ 0.58
LIM2-201ENST00000221973 MYADML2A6NDP7 307 aa18.69■□□□□ 0.58
LIM2-201ENST00000221973 PDIA4P13667 645 aaKnown RBP18.69■□□□□ 0.58
LIM2-201ENST00000221973 U2AF2P26368 475 aaKnown RBP eCLIP18.69■□□□□ 0.58
LIM2-201ENST00000221973 DDIT3P35638 169 aa18.69■□□□□ 0.58
LIM2-201ENST00000221973 NONOQ15233 471 aaKnown RBP eCLIP18.69■□□□□ 0.58
LIM2-201ENST00000221973 FAM109BQ6ICB4 259 aaPredicted RBP18.69■□□□□ 0.58
LIM2-201ENST00000221973 NOSTRINQ8IVI9 506 aa18.69■□□□□ 0.58
LIM2-201ENST00000221973 KATNBL1Q9H079 304 aa18.69■□□□□ 0.58
LIM2-201ENST00000221973 PRDM5Q9NQX1 630 aaPredicted RBP18.69■□□□□ 0.58
LIM2-201ENST00000221973 VCANP13611 3396 aa18.69■□□□□ 0.58
LIM2-201ENST00000221973 PRUNE2Q8WUY3 3088 aa18.69■□□□□ 0.58
LIM2-201ENST00000221973 ZSCAN22P10073 491 aaPredicted RBP18.68■□□□□ 0.58
LIM2-201ENST00000221973 MYCLP12524 364 aaPredicted RBP18.68■□□□□ 0.58
LIM2-201ENST00000221973 PGM5Q15124 567 aa18.68■□□□□ 0.58
LIM2-201ENST00000221973 INF2Q27J81 1249 aa18.68■□□□□ 0.58
LIM2-201ENST00000221973 IL31RAQ8NI17 732 aa18.68■□□□□ 0.58
LIM2-201ENST00000221973 TBCKQ8TEA7 893 aa18.68■□□□□ 0.58
LIM2-201ENST00000221973 PDCD2LQ9BRP1 358 aa18.68■□□□□ 0.58
LIM2-201ENST00000221973 TSEN34Q9BSV6 310 aaKnown RBP18.68■□□□□ 0.58
LIM2-201ENST00000221973 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.68■□□□□ 0.58
LIM2-201ENST00000221973 FAM184BQ9ULE4 1060 aa18.68■□□□□ 0.58
LIM2-201ENST00000221973 NR3C2P08235 984 aa18.67■□□□□ 0.58
LIM2-201ENST00000221973 SREBF1P36956 1147 aa18.67■□□□□ 0.58
LIM2-201ENST00000221973 ACLYP53396 1101 aa18.67■□□□□ 0.58
LIM2-201ENST00000221973 EPHB4P54760 987 aa18.67■□□□□ 0.58
LIM2-201ENST00000221973 ARHGAP4P98171 946 aa18.67■□□□□ 0.58
LIM2-201ENST00000221973 RESTQ13127 1097 aa18.67■□□□□ 0.58
LIM2-201ENST00000221973 ACVR2BQ13705 512 aa18.67■□□□□ 0.58
LIM2-201ENST00000221973 ZFP91Q96JP5 570 aaPredicted RBP18.67■□□□□ 0.58
LIM2-201ENST00000221973 GUCD1Q96NT3 240 aa18.67■□□□□ 0.58
LIM2-201ENST00000221973 IWS1Q96ST2 819 aa18.67■□□□□ 0.58
LIM2-201ENST00000221973 ZHX1Q9UKY1 873 aaPredicted RBP18.67■□□□□ 0.58
LIM2-201ENST00000221973 FRMPD4Q14CM0 1322 aa18.67■□□□□ 0.58
LIM2-201ENST00000221973 ASB14A6NK59 587 aa18.66■□□□□ 0.58
LIM2-201ENST00000221973 KIAA0355O15063 1070 aa18.66■□□□□ 0.58
LIM2-201ENST00000221973 CTAGE5O15320 804 aa18.66■□□□□ 0.58
LIM2-201ENST00000221973 DUSP11O75319 330 aaKnown RBP18.66■□□□□ 0.58
LIM2-201ENST00000221973 BRD1O95696 1058 aa18.66■□□□□ 0.58
LIM2-201ENST00000221973 CCND2P30279 289 aa18.66■□□□□ 0.58
LIM2-201ENST00000221973 PDE4DQ08499 809 aa18.66■□□□□ 0.58
LIM2-201ENST00000221973 KCNA10Q16322 511 aa18.66■□□□□ 0.58
LIM2-201ENST00000221973 ARMCX2Q7L311 632 aa18.66■□□□□ 0.58
LIM2-201ENST00000221973 ANKRD33Q7Z3H0 272 aa18.66■□□□□ 0.58
LIM2-201ENST00000221973 MPHOSPH6Q99547 160 aaKnown RBP18.66■□□□□ 0.58
LIM2-201ENST00000221973 ZDHHC9Q9Y397 364 aa18.66■□□□□ 0.58
LIM2-201ENST00000221973 B4DLN1 442 aa18.65■□□□□ 0.58
LIM2-201ENST00000221973 F13A1P00488 732 aa18.65■□□□□ 0.58
LIM2-201ENST00000221973 CLTBP09497 229 aa18.65■□□□□ 0.58
LIM2-201ENST00000221973 ATP2B1P20020 1258 aa18.65■□□□□ 0.58
LIM2-201ENST00000221973 EDNRBP24530 442 aa18.65■□□□□ 0.58
LIM2-201ENST00000221973 CST5P28325 142 aaPredicted RBP18.65■□□□□ 0.58
LIM2-201ENST00000221973 FAAP100Q0VG06 881 aa18.65■□□□□ 0.58
LIM2-201ENST00000221973 CCDC144BQ3MJ40 725 aa18.65■□□□□ 0.58
LIM2-201ENST00000221973 PCNX4Q63HM2 1172 aa18.65■□□□□ 0.58
LIM2-201ENST00000221973 BRAPQ7Z569 592 aa18.65■□□□□ 0.58
LIM2-201ENST00000221973 UPF3AQ9H1J1 476 aaKnown RBP18.65■□□□□ 0.58
LIM2-201ENST00000221973 ABHD16BQ9H3Z7 469 aa18.65■□□□□ 0.58
LIM2-201ENST00000221973 RTEL1Q9NZ71 1219 aa18.65■□□□□ 0.58
LIM2-201ENST00000221973 CUL9Q8IWT3 2517 aa18.65■□□□□ 0.58
LIM2-201ENST00000221973 MOXD2PA6NHM9 499 aa18.64■□□□□ 0.57
LIM2-201ENST00000221973 EDIL3O43854 480 aa18.64■□□□□ 0.57
LIM2-201ENST00000221973 PQBP1O60828 265 aaKnown RBP18.64■□□□□ 0.57
LIM2-201ENST00000221973 ZNF76P36508 570 aa18.64■□□□□ 0.57
LIM2-201ENST00000221973 NUCB2P80303 420 aa18.64■□□□□ 0.57
LIM2-201ENST00000221973 MRPS9P82933 396 aaKnown RBP18.64■□□□□ 0.57
LIM2-201ENST00000221973 STXBP2Q15833 593 aa18.64■□□□□ 0.57
LIM2-201ENST00000221973 LETM2Q2VYF4 491 aa18.64■□□□□ 0.57
LIM2-201ENST00000221973 FAM173BQ6P4H8 233 aa18.64■□□□□ 0.57
LIM2-201ENST00000221973 EEPD1Q7L9B9 569 aa18.64■□□□□ 0.57
LIM2-201ENST00000221973 NEK8Q86SG6 692 aa18.64■□□□□ 0.57
LIM2-201ENST00000221973 VSIG10LQ86VR7 867 aa18.64■□□□□ 0.57
LIM2-201ENST00000221973 CRYGNQ8WXF5 182 aa18.64■□□□□ 0.57
LIM2-201ENST00000221973 TOX2Q96NM4 488 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms