RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 HERC4Q5GLZ8 1057 aaPredicted RBP11.95□□□□□ -0.5
USP31-201ENST00000219689 CC2D2BQ6DHV5 1058 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 DIS3L2Q8IYB7 885 aaKnown RBP11.95□□□□□ -0.5
USP31-201ENST00000219689 TBC1D22AQ8WUA7 517 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 GSDMAQ96QA5 445 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 KRT31Q15323 416 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 CCDC144BQ3MJ40 725 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 CNOT6LQ96LI5 555 aaKnown RBP11.95□□□□□ -0.5
USP31-201ENST00000219689 PSD3Q9NYI0 1048 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 SERPINB1P30740 379 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 VSNL1P62760 191 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 FNBP1Q96RU3 617 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 WDR24Q96S15 920 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 LRRC14Q15048 493 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 SGO2Q562F6 1265 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 ATG16L1Q676U5 607 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 C19orf44Q9H6X5 657 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 HPCAL4Q9UM19 191 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 VAMP4O75379 141 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 GRAMD1CQ8IYS0 662 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 UPF3AQ9H1J1 476 aaKnown RBP11.95□□□□□ -0.5
USP31-201ENST00000219689 SEPT3Q9UH03 358 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 CUL7Q14999 1698 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 SCN8AQ9UQD0 1980 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 PTPRGP23470 1445 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 SSH2Q76I76 1423 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 TRIM16LQ309B1 348 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 KDRP35968 1356 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 CTIFO43310 598 aaKnown RBP11.95□□□□□ -0.5
USP31-201ENST00000219689 ATP6V1B1P15313 513 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 KRT4P19013 534 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 SMTNP53814 917 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 HEATR4Q86WZ0 1026 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 ZBTB3Q9H5J0 574 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 ZNF148Q9UQR1 794 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.94□□□□□ -0.5
USP31-201ENST00000219689 BACH1O14867 736 aa11.94□□□□□ -0.5
USP31-201ENST00000219689 ABCD1P33897 745 aa11.94□□□□□ -0.5
USP31-201ENST00000219689 BTNL9Q6UXG8 535 aa11.94□□□□□ -0.5
USP31-201ENST00000219689 CNBD2Q96M20 576 aa11.94□□□□□ -0.5
USP31-201ENST00000219689 VPS54Q9P1Q0 977 aa11.94□□□□□ -0.5
USP31-201ENST00000219689 GTPBP10A4D1E9 387 aaKnown RBP11.94□□□□□ -0.5
USP31-201ENST00000219689 CCDC103Q8IW40 242 aa11.94□□□□□ -0.5
USP31-201ENST00000219689 ATP1A3P13637 1013 aa11.94□□□□□ -0.5
USP31-201ENST00000219689 VCAM1P19320 739 aa11.94□□□□□ -0.5
USP31-201ENST00000219689 TMTC4Q5T4D3 741 aa11.94□□□□□ -0.5
USP31-201ENST00000219689 CYB5D1Q6P9G0 228 aa11.94□□□□□ -0.5
USP31-201ENST00000219689 LRRC31Q6UY01 552 aa11.94□□□□□ -0.5
USP31-201ENST00000219689 V9GY48 417 aaPredicted RBP11.94□□□□□ -0.5
USP31-201ENST00000219689 SYCP2Q9BX26 1530 aa11.94□□□□□ -0.5
USP31-201ENST00000219689 TMC5Q6UXY8 1006 aa11.94□□□□□ -0.5
USP31-201ENST00000219689 PARP1P09874 1014 aaKnown RBP11.94□□□□□ -0.5
USP31-201ENST00000219689 GARSP41250 739 aaKnown RBP11.94□□□□□ -0.5
USP31-201ENST00000219689 AP1B1Q10567 949 aa11.94□□□□□ -0.5
USP31-201ENST00000219689 NONOQ15233 471 aaKnown RBP eCLIP11.94□□□□□ -0.5
USP31-201ENST00000219689 SLC4A1P02730 911 aa11.94□□□□□ -0.5
USP31-201ENST00000219689 XRCC5P13010 732 aaKnown RBP11.94□□□□□ -0.5
USP31-201ENST00000219689 CABP7Q86V35 215 aa11.94□□□□□ -0.5
USP31-201ENST00000219689 EPHB1P54762 984 aa11.94□□□□□ -0.5
USP31-201ENST00000219689 MDM2Q00987 491 aaPredicted RBP11.94□□□□□ -0.5
USP31-201ENST00000219689 TUBGCP2Q9BSJ2 902 aa11.94□□□□□ -0.5
USP31-201ENST00000219689 CA4P22748 312 aa11.94□□□□□ -0.5
USP31-201ENST00000219689 CYP4F11Q9HBI6 524 aa11.94□□□□□ -0.5
USP31-201ENST00000219689 CYP2J2P51589 502 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 BFSP1Q12934 665 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 CEP78Q5JTW2 689 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 UGGT2Q9NYU1 1516 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 ASZ1Q8WWH4 475 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 ATP6V0A4Q9HBG4 840 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 RGL1Q9NZL6 768 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 PGM1P36871 562 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 MDH1P40925 334 aaKnown RBP11.93□□□□□ -0.5
USP31-201ENST00000219689 PTH1RQ03431 593 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 TRPM8Q7Z2W7 1104 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 KLHL23Q8NBE8 558 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 SAMSN1Q9NSI8 373 aaKnown RBP11.93□□□□□ -0.5
USP31-201ENST00000219689 SNX5Q9Y5X3 404 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 ECEL1O95672 775 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 EIF4A3P38919 411 aaKnown RBP11.93□□□□□ -0.5
USP31-201ENST00000219689 UBE3AQ05086 875 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 MYCT1Q8N699 235 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 NDUFB9Q9Y6M9 179 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 MRGBPQ9NV56 204 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 IKBKBO14920 756 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 TTC17Q96AE7 1141 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 PKD2L1Q9P0L9 805 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 CFAP69A5D8W1 941 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 PHF20L1A8MW92 1017 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 PALMO75781 387 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 DLGAP3O95886 979 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 IGF1RP08069 1367 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 MAFGO15525 162 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 CADPS2Q86UW7 1296 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 TRIM55Q9BYV6 548 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 FAM135BQ49AJ0 1406 aa11.93□□□□□ -0.5
USP31-201ENST00000219689 SRRM1Q8IYB3 904 aaKnown RBP11.92□□□□□ -0.5
USP31-201ENST00000219689 MPP4Q96JB8 637 aa11.92□□□□□ -0.5
USP31-201ENST00000219689 RASA4BC9J798 803 aa11.92□□□□□ -0.5
USP31-201ENST00000219689 RASA4O43374 803 aa11.92□□□□□ -0.5
USP31-201ENST00000219689 VCPKMTQ9H867 229 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms