RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 GRK4P32298 578 aa30.9■■■□□ 2.54
CHMP4B-201ENST00000217402 SF3A1Q15459 793 aaKnown RBP30.9■■■□□ 2.54
CHMP4B-201ENST00000217402 NIPA1Q7RTP0 329 aa30.9■■■□□ 2.54
CHMP4B-201ENST00000217402 KCNH7Q9NS40 1196 aa30.9■■■□□ 2.54
CHMP4B-201ENST00000217402 FIBPO43427 364 aa30.89■■■□□ 2.54
CHMP4B-201ENST00000217402 NCLP19338 710 aaKnown RBP30.89■■■□□ 2.54
CHMP4B-201ENST00000217402 ANO1Q5XXA6 986 aa30.89■■■□□ 2.54
CHMP4B-201ENST00000217402 MRVI1Q9Y6F6 885 aa30.89■■■□□ 2.54
CHMP4B-201ENST00000217402 SEMA3FQ13275 785 aa30.88■■■□□ 2.53
CHMP4B-201ENST00000217402 TAPT1Q6NXT6 567 aa30.88■■■□□ 2.53
CHMP4B-201ENST00000217402 TNPO1Q92973 898 aaKnown RBP30.88■■■□□ 2.53
CHMP4B-201ENST00000217402 PRKAR2AP13861 404 aaKnown RBP30.87■■■□□ 2.53
CHMP4B-201ENST00000217402 CACNB2Q08289 660 aaPredicted RBP30.87■■■□□ 2.53
CHMP4B-201ENST00000217402 ORC2Q13416 577 aaPredicted RBP30.87■■■□□ 2.53
CHMP4B-201ENST00000217402 CALCRLQ16602 461 aa30.87■■■□□ 2.53
CHMP4B-201ENST00000217402 SH3TC2Q8TF17 1288 aa30.87■■■□□ 2.53
CHMP4B-201ENST00000217402 GJA10Q969M2 543 aa30.87■■■□□ 2.53
CHMP4B-201ENST00000217402 TMEM60Q9H2L4 133 aa30.87■■■□□ 2.53
CHMP4B-201ENST00000217402 SPATA31C2B4DYI2 1134 aa30.87■■■□□ 2.53
CHMP4B-201ENST00000217402 MSH4O15457 936 aa30.87■■■□□ 2.53
CHMP4B-201ENST00000217402 INHAP05111 366 aa30.87■■■□□ 2.53
CHMP4B-201ENST00000217402 ZNF865P0CJ78 1059 aaPredicted RBP30.87■■■□□ 2.53
CHMP4B-201ENST00000217402 ADCYAP1R1P41586 468 aa30.87■■■□□ 2.53
CHMP4B-201ENST00000217402 PTGDRQ13258 359 aa30.87■■■□□ 2.53
CHMP4B-201ENST00000217402 TRPV1Q8NER1 839 aa30.87■■■□□ 2.53
CHMP4B-201ENST00000217402 SCFD2Q8WU76 684 aa30.87■■■□□ 2.53
CHMP4B-201ENST00000217402 ARIH2O95376 493 aa30.86■■■□□ 2.53
CHMP4B-201ENST00000217402 CYBAP13498 195 aa30.86■■■□□ 2.53
CHMP4B-201ENST00000217402 CCDC144BQ3MJ40 725 aa30.86■■■□□ 2.53
CHMP4B-201ENST00000217402 CDHR1Q96JP9 859 aa30.86■■■□□ 2.53
CHMP4B-201ENST00000217402 ZNF577Q9BSK1 485 aa30.86■■■□□ 2.53
CHMP4B-201ENST00000217402 AGO4Q9HCK5 861 aaKnown RBP30.86■■■□□ 2.53
CHMP4B-201ENST00000217402 KIAA1217Q5T5P2 1943 aa30.86■■■□□ 2.53
CHMP4B-201ENST00000217402 MARCH6O60337 910 aa30.85■■■□□ 2.53
CHMP4B-201ENST00000217402 ICAM3P32942 547 aa30.85■■■□□ 2.53
CHMP4B-201ENST00000217402 ETNPPLQ8TBG4 499 aa30.85■■■□□ 2.53
CHMP4B-201ENST00000217402 POLR3EQ9NVU0 708 aa30.85■■■□□ 2.53
CHMP4B-201ENST00000217402 CEP131Q9UPN4 1083 aa30.85■■■□□ 2.53
CHMP4B-201ENST00000217402 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.84■■■□□ 2.53
CHMP4B-201ENST00000217402 ATP9AO75110 1047 aa30.84■■■□□ 2.53
CHMP4B-201ENST00000217402 KRT85P78386 507 aa30.84■■■□□ 2.53
CHMP4B-201ENST00000217402 TTLL4Q14679 1199 aa30.84■■■□□ 2.53
CHMP4B-201ENST00000217402 LY6KQ17RY6 165 aa30.84■■■□□ 2.53
CHMP4B-201ENST00000217402 SLC9C1Q4G0N8 1177 aa30.84■■■□□ 2.53
CHMP4B-201ENST00000217402 TMEM63BQ5T3F8 832 aa30.84■■■□□ 2.53
CHMP4B-201ENST00000217402 KCNMB3Q9NPA1 279 aa30.84■■■□□ 2.53
CHMP4B-201ENST00000217402 PRDM10Q9NQV6 1147 aa30.84■■■□□ 2.53
CHMP4B-201ENST00000217402 CFAP45Q9UL16 551 aa30.84■■■□□ 2.53
CHMP4B-201ENST00000217402 IPO5O00410 1097 aaKnown RBP30.84■■■□□ 2.53
CHMP4B-201ENST00000217402 MAFGO15525 162 aa30.84■■■□□ 2.53
CHMP4B-201ENST00000217402 SORBS3O60504 671 aa30.84■■■□□ 2.53
CHMP4B-201ENST00000217402 OR52Z1P0C646 297 aa30.84■■■□□ 2.53
CHMP4B-201ENST00000217402 TXNP10599 105 aaKnown RBP30.84■■■□□ 2.53
CHMP4B-201ENST00000217402 ATL3Q6DD88 541 aa30.84■■■□□ 2.53
CHMP4B-201ENST00000217402 C4orf32Q8N8J7 132 aa30.84■■■□□ 2.53
CHMP4B-201ENST00000217402 HAS1Q92839 578 aa30.84■■■□□ 2.53
CHMP4B-201ENST00000217402 NRBP1Q9UHY1 535 aa30.84■■■□□ 2.53
CHMP4B-201ENST00000217402 RBM47A0AV96 593 aaKnown RBP30.83■■■□□ 2.53
CHMP4B-201ENST00000217402 UBA1P22314 1058 aaKnown RBP30.83■■■□□ 2.53
CHMP4B-201ENST00000217402 CNGA1P29973 690 aa30.83■■■□□ 2.53
CHMP4B-201ENST00000217402 NASPP49321 788 aaPredicted RBP30.83■■■□□ 2.53
CHMP4B-201ENST00000217402 ATP2C1P98194 919 aaPredicted RBP30.83■■■□□ 2.53
CHMP4B-201ENST00000217402 SP2Q02086 613 aa30.83■■■□□ 2.53
CHMP4B-201ENST00000217402 PTPAQ15257 358 aa30.83■■■□□ 2.53
CHMP4B-201ENST00000217402 FBXO46Q6PJ61 603 aaPredicted RBP30.83■■■□□ 2.53
CHMP4B-201ENST00000217402 BMP15O95972 392 aa30.82■■■□□ 2.52
CHMP4B-201ENST00000217402 KCNA2P16389 499 aa30.82■■■□□ 2.52
CHMP4B-201ENST00000217402 PTGS1P23219 599 aa30.82■■■□□ 2.52
CHMP4B-201ENST00000217402 CCND3P30281 292 aaPredicted RBP30.82■■■□□ 2.52
CHMP4B-201ENST00000217402 ITGB3BPQ13352 177 aaPredicted RBP30.82■■■□□ 2.52
CHMP4B-201ENST00000217402 STK38Q15208 465 aa30.82■■■□□ 2.52
CHMP4B-201ENST00000217402 GJC2Q5T442 439 aaPredicted RBP30.82■■■□□ 2.52
CHMP4B-201ENST00000217402 MAP3K21Q5TCX8 1036 aa30.82■■■□□ 2.52
CHMP4B-201ENST00000217402 CCDC62Q6P9F0 684 aa30.82■■■□□ 2.52
CHMP4B-201ENST00000217402 KCNV1Q6PIU1 500 aa30.82■■■□□ 2.52
CHMP4B-201ENST00000217402 MTMR9Q96QG7 549 aa30.82■■■□□ 2.52
CHMP4B-201ENST00000217402 DDX41Q9UJV9 622 aaKnown RBP30.82■■■□□ 2.52
CHMP4B-201ENST00000217402 ADCY6O43306 1168 aa30.81■■■□□ 2.52
CHMP4B-201ENST00000217402 TGFB3P10600 412 aa30.81■■■□□ 2.52
CHMP4B-201ENST00000217402 SLC5A5Q92911 643 aa30.81■■■□□ 2.52
CHMP4B-201ENST00000217402 LENG1Q96BZ8 264 aaPredicted RBP30.81■■■□□ 2.52
CHMP4B-201ENST00000217402 BCAS3Q9H6U6 928 aa30.81■■■□□ 2.52
CHMP4B-201ENST00000217402 CENPFP49454 3210 aa30.81■■■□□ 2.52
CHMP4B-201ENST00000217402 DDX39AO00148 427 aaKnown RBP30.8■■■□□ 2.52
CHMP4B-201ENST00000217402 TBX3O15119 743 aa30.8■■■□□ 2.52
CHMP4B-201ENST00000217402 BAG4O95429 457 aaKnown RBP30.8■■■□□ 2.52
CHMP4B-201ENST00000217402 SMPD1P17405 629 aa30.8■■■□□ 2.52
CHMP4B-201ENST00000217402 TXKP42681 527 aa30.8■■■□□ 2.52
CHMP4B-201ENST00000217402 TNFAIP2Q03169 654 aa30.8■■■□□ 2.52
CHMP4B-201ENST00000217402 PKN2Q16513 984 aaKnown RBP30.8■■■□□ 2.52
CHMP4B-201ENST00000217402 LRCH2Q5VUJ6 765 aa30.8■■■□□ 2.52
CHMP4B-201ENST00000217402 LINC00301Q8NCQ3 95 aa30.8■■■□□ 2.52
CHMP4B-201ENST00000217402 COPS5Q92905 334 aa30.8■■■□□ 2.52
CHMP4B-201ENST00000217402 FAM20AQ96MK3 541 aa30.8■■■□□ 2.52
CHMP4B-201ENST00000217402 FAM184BQ9ULE4 1060 aa30.8■■■□□ 2.52
CHMP4B-201ENST00000217402 MARCKSP29966 332 aaPredicted RBP30.8■■■□□ 2.52
CHMP4B-201ENST00000217402 SLC39A14Q15043 492 aa30.8■■■□□ 2.52
CHMP4B-201ENST00000217402 IQSEC1Q6DN90 963 aa30.8■■■□□ 2.52
CHMP4B-201ENST00000217402 SLFN12Q8IYM2 578 aa30.8■■■□□ 2.52
CHMP4B-201ENST00000217402 GDPD2Q9HCC8 539 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms