RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 APBA1Q02410 837 aa11.61□□□□□ -0.55
CX3CL1-201ENST00000006053 PDXDC1Q6P996 788 aa11.61□□□□□ -0.55
CX3CL1-201ENST00000006053 ZNF572Q7Z3I7 529 aaPredicted RBP11.61□□□□□ -0.55
CX3CL1-201ENST00000006053 TXNRD3Q86VQ6 643 aa11.61□□□□□ -0.55
CX3CL1-201ENST00000006053 SH3RF3Q8TEJ3 882 aaPredicted RBP11.61□□□□□ -0.55
CX3CL1-201ENST00000006053 BAP1Q92560 729 aa11.61□□□□□ -0.55
CX3CL1-201ENST00000006053 IQCDQ96DY2 449 aa11.61□□□□□ -0.55
CX3CL1-201ENST00000006053 CALR3Q96L12 384 aaKnown RBP11.61□□□□□ -0.55
CX3CL1-201ENST00000006053 KRT12Q99456 494 aa11.61□□□□□ -0.55
CX3CL1-201ENST00000006053 KANSL2Q9H9L4 492 aa11.61□□□□□ -0.55
CX3CL1-201ENST00000006053 PALMO75781 387 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 FGFR1OPO95684 399 aaKnown RBP11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 TAF1P21675 1872 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 GUCY1A3Q02108 690 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 GRB10Q13322 594 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 DIXDC1Q155Q3 683 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 CCDC40Q4G0X9 1142 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 LARP4BQ92615 738 aaKnown RBP11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 POTEMA6NI47 508 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 H0YHG0 523 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 KIAA0754O94854 1291 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 SSBP05455 408 aaKnown RBP eCLIP11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 GNA11P29992 359 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 RPS8P62241 208 aaKnown RBP11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 UNC13DQ70J99 1090 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 MAPKAPK5Q8IW41 473 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 CAVIN3Q969G5 261 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 RNPC3Q96LT9 517 aaKnown RBP11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 UIMC1Q96RL1 719 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 UBA5Q9GZZ9 404 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 ZMYND12Q9H0C1 365 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 BLOC1S4Q9NUP1 217 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 TBC1D7Q9P0N9 293 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 SEC63Q9UGP8 760 aaKnown RBP11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 CAPN7Q9Y6W3 813 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 PALM3A6NDB9 673 aaPredicted RBP11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 TRAF5O00463 557 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 EHHADHQ08426 723 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 SF3B3Q15393 1217 aaKnown RBP11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 TRADDQ15628 312 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 PTPROQ16827 1216 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 NBPF20Q3BBV1 942 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 SLC9C1Q4G0N8 1177 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 MAATS1Q7Z4T9 603 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 KLHL7Q8IXQ5 586 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 TSG101Q99816 390 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 SH3BP1Q9Y3L3 701 aa11.6□□□□□ -0.55
CX3CL1-201ENST00000006053 NHSL1Q5SYE7 1610 aa11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 LCA5LO95447 670 aa11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 POLR2FP61218 127 aaKnown RBP11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 PAK2Q13177 524 aa11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 CALCRLQ16602 461 aa11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 KCTD19Q17RG1 926 aaPredicted RBP11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 RUBCNQ92622 972 aa11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 PIGSQ96S52 555 aa11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 LSM14BQ9BX40 385 aaKnown RBP11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 ZNF233A6NK53 670 aa11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 PJA2O43164 708 aa11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 EPB41P11171 864 aaKnown RBP11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 SKOR1P84550 965 aa11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 KCNMA1Q12791 1236 aa11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 SFMBT2Q5VUG0 894 aa11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 REXO1Q8N1G1 1221 aaKnown RBP11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 OTUD6BQ8N6M0 293 aa11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 SNX29Q8TEQ0 813 aa11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 TBC1D5Q92609 795 aa11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 PNMA5Q96PV4 448 aa11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 NUDT12Q9BQG2 462 aa11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 A0A1B0GUL6 1792 aa11.59□□□□□ -0.55
CX3CL1-201ENST00000006053 KLRC1P26715 233 aa11.58□□□□□ -0.55
CX3CL1-201ENST00000006053 RAPGEF1Q13905 1077 aa11.58□□□□□ -0.55
CX3CL1-201ENST00000006053 HLTFQ14527 1009 aaKnown RBP eCLIP11.58□□□□□ -0.55
CX3CL1-201ENST00000006053 GUF1Q8N442 669 aaKnown RBP11.58□□□□□ -0.55
CX3CL1-201ENST00000006053 DDX12PQ92771 950 aa11.58□□□□□ -0.55
CX3CL1-201ENST00000006053 DLEC1Q9Y238 1755 aa11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 CCDC189A1A4V9 331 aa11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 TDP2O95551 362 aa11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 LDHBP07195 334 aaKnown RBP11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 HNRNPH1P31943 449 aaKnown RBP11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 HPDP32754 393 aaPredicted RBP11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 TMEM266Q2M3C6 531 aa11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 ASTE1Q2TB18 679 aaPredicted RBP11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 GLE1Q53GS7 698 aaKnown RBP11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 RNF187Q5TA31 235 aaPredicted RBP11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 HGSNATQ68CP4 663 aa11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 B4GALNT4Q76KP1 1039 aa11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 NELFCDQ8IXH7 590 aa11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 CASKIN2Q8WXE0 1202 aa11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 MARCH6O60337 910 aa11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 LSP1P33241 339 aa11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 SEC24CP53992 1094 aa11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 LRRC63Q05C16 580 aa11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 FAM83BQ5T0W9 1011 aa11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 LRRC55Q6ZSA7 311 aa11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 KCNK18Q7Z418 384 aa11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 RNF10Q8N5U6 811 aaKnown RBP11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 PROCA1Q8NCQ7 364 aaPredicted RBP11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 ANKS1AQ92625 1134 aa11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 GJA10Q969M2 543 aa11.58□□□□□ -0.56
CX3CL1-201ENST00000006053 PACSIN1Q9BY11 444 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms