RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Acad11Q80XL6 779 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Cyp4f39Q8BGU0 532 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Cdc23Q8BGZ4 597 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Kiaa1024Q8K3V7 917 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Tmem134Q8R0J4 195 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Plcb4Q91UZ1 1175 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Klhl40Q9D783 621 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 VirmaA2AIV2 1811 aaKnown RBP11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Kif23E9Q5G3 953 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Snap25P60879 206 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Esyt3Q5DTI8 891 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Brip1Q5SXJ3 1174 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Klhl23Q6GQU2 558 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 B4galnt4Q766D5 1034 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Iffo1Q8BXL9 562 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Q8C5C9 218 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Lmbrd1Q8K0B2 537 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Arhgef6Q8K4I3 771 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Znf445Q8R2V3 986 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Klf15Q9EPW2 415 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Plxnb2B2RXS4 1842 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Zfp646Q6NV66 1788 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Armc3A2AU72 881 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Rps6ka3P18654 740 aaKnown RBP11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Nol4P60954 483 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Psmb7P70195 277 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Cct5P80316 541 aaKnown RBP11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Qrich1Q3UA37 777 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Lrrfip1Q3UZ39 729 aaKnown RBP11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Phactr4Q501J7 694 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Tbc1d9bQ5SVR0 1263 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Fkbp3Q62446 224 aaKnown RBP11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Prpf40bQ80W14 870 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Hpcal4Q8BGZ1 191 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Armc6Q8BNU0 468 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 MyripQ8K3I4 856 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Ppp1r3gQ9CW07 347 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Ebag9Q9D0V7 213 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Tjap1Q9DCD5 539 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Sorbs3Q9R1Z8 733 aa11.6□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Bpifb4A2BGH0 617 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Akap2O54931 893 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Krt18P05784 423 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Sem1P60897 70 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Fbln1Q08879 705 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Ncf1Q09014 390 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Dnph1Q80VJ3 173 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 PaoxQ8C0L6 504 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Eid1Q9DCR4 169 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Fxr2Q9WVR4 673 aaKnown RBP11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 GsdmeQ9Z2D3 512 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Map7d1A2AJI0 846 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Arhgap6O54834 987 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Man1a2P39098 641 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Pfkfb2P70265 519 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Surf6P70279 355 aaKnown RBP11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Cyp2e1Q05421 493 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Mybpc2Q5XKE0 1136 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Mrps31Q61733 384 aaKnown RBP11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Sycp1Q62209 993 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Ccdc189Q6NZQ0 333 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 BcrQ6PAJ1 1270 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Jade2Q6ZQF7 829 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Krt79Q8VED5 531 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Ranbp17Q99NF8 1088 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Six6os1Q9CTN5 574 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Efhd1Q9D4J1 240 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Egfl6Q9JJZ5 550 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Ercc4Q9QZD4 917 aa11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Uso1Q9Z1Z0 959 aaKnown RBP11.59□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Slc27a3O88561 667 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Abcd1P48410 736 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Tigd5Q499M4 642 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Stxbp3Q60770 592 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Lrrcc1Q69ZB0 1026 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Lrrc1Q80VQ1 524 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Pdzph1Q8BGR1 1238 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Ankrd49Q8VE42 238 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Syf2Q9D198 242 aaKnown RBP11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 ToporslQ9D2F8 683 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Bub1bQ9Z1S0 1052 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Col1a1P11087 1453 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 1700122O11RikJ3QPW6 241 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Msh3P13705 1091 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Nedd4P46935 887 aaKnown RBP11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Acot10Q32MW3 439 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Vmn1r209Q5NC97 312 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 PolnQ7TQ07 864 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Srrm3Q80WV7 648 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Ms4a5Q810P8 197 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Scfd1Q8BRF7 639 aaKnown RBP11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Riox2Q8CD15 465 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Ccdc14Q8K2J4 934 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Kremen1Q99N43 473 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Lztr1Q9CQ33 837 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Ppp1r12aQ9DBR7 1029 aaKnown RBP11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Zbtb12Q9Z150 459 aa11.58□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Dnaaf5B9EJR8 853 aa11.57□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Tpp1O89023 562 aa11.57□□□□□ -0.56
Ptpre-208ENSMUST00000211788 Pola2P33611 600 aa11.57□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms