RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 NefhP19246 1090 aa17.65■□□□□ 0.42
Trim39-203ENSMUST00000113706 Zc3h15Q3TIV5 426 aaKnown RBP17.65■□□□□ 0.42
Trim39-203ENSMUST00000113706 Nt5c2Q3V1L4 560 aa17.65■□□□□ 0.42
Trim39-203ENSMUST00000113706 Cacnb1Q8R3Z5 597 aa17.65■□□□□ 0.42
Trim39-203ENSMUST00000113706 Gm45208A0A140LJ36 292 aa17.65■□□□□ 0.42
Trim39-203ENSMUST00000113706 Abcb4P21440 1276 aa17.65■□□□□ 0.42
Trim39-203ENSMUST00000113706 Rnf216P58283 853 aa17.65■□□□□ 0.42
Trim39-203ENSMUST00000113706 Lrch1P62046 709 aa17.65■□□□□ 0.42
Trim39-203ENSMUST00000113706 Psmc6P62334 389 aa17.65■□□□□ 0.42
Trim39-203ENSMUST00000113706 Meis1Q60954 390 aa17.65■□□□□ 0.42
Trim39-203ENSMUST00000113706 Rexo1Q7TT28 1213 aa17.65■□□□□ 0.42
Trim39-203ENSMUST00000113706 Lrrc41Q8K1C9 807 aa17.65■□□□□ 0.42
Trim39-203ENSMUST00000113706 Vps18Q8R307 973 aa17.65■□□□□ 0.42
Trim39-203ENSMUST00000113706 Ddah1Q9CWS0 285 aa17.65■□□□□ 0.42
Trim39-203ENSMUST00000113706 Sbf2E9PXF8 1872 aa17.65■□□□□ 0.42
Trim39-203ENSMUST00000113706 Gng11P61953 73 aa17.64■□□□□ 0.42
Trim39-203ENSMUST00000113706 NfibP97863 570 aaKnown RBP17.64■□□□□ 0.42
Trim39-203ENSMUST00000113706 Nsun7Q14AW5 724 aa17.64■□□□□ 0.42
Trim39-203ENSMUST00000113706 Nlrx1Q3TL44 975 aa17.64■□□□□ 0.42
Trim39-203ENSMUST00000113706 Tube1Q9D6T1 475 aa17.64■□□□□ 0.42
Trim39-203ENSMUST00000113706 ChmQ9QXG2 665 aa17.64■□□□□ 0.42
Trim39-203ENSMUST00000113706 Slc9a2Q3ZAS0 814 aa17.64■□□□□ 0.41
Trim39-203ENSMUST00000113706 Cyp4f39Q8BGU0 532 aa17.64■□□□□ 0.41
Trim39-203ENSMUST00000113706 Bri3bpQ8BXV2 253 aa17.64■□□□□ 0.41
Trim39-203ENSMUST00000113706 Rab3il1Q8VDV3 383 aa17.64■□□□□ 0.41
Trim39-203ENSMUST00000113706 PdhbQ9D051 359 aa17.64■□□□□ 0.41
Trim39-203ENSMUST00000113706 Sorbs3Q9R1Z8 733 aa17.64■□□□□ 0.41
Trim39-203ENSMUST00000113706 Prl2c3P04768 224 aa17.64■□□□□ 0.41
Trim39-203ENSMUST00000113706 Fgl2P12804 432 aa17.64■□□□□ 0.41
Trim39-203ENSMUST00000113706 Gtpbp6Q3U6U5 514 aa17.64■□□□□ 0.41
Trim39-203ENSMUST00000113706 Nom1Q3UFM5 854 aaKnown RBP17.64■□□□□ 0.41
Trim39-203ENSMUST00000113706 PfasQ5SUR0 1337 aa17.63■□□□□ 0.41
Trim39-203ENSMUST00000113706 Tpp1O89023 562 aa17.63■□□□□ 0.41
Trim39-203ENSMUST00000113706 Mcm7Q61881 719 aaKnown RBP17.63■□□□□ 0.41
Trim39-203ENSMUST00000113706 Garem2Q6PAJ3 880 aa17.63■□□□□ 0.41
Trim39-203ENSMUST00000113706 Gpr150Q8BL07 427 aa17.63■□□□□ 0.41
Trim39-203ENSMUST00000113706 Fam13bQ8K2H3 851 aa17.63■□□□□ 0.41
Trim39-203ENSMUST00000113706 RnmtQ9D0L8 465 aaKnown RBP17.63■□□□□ 0.41
Trim39-203ENSMUST00000113706 Klhl10Q9D5V2 608 aa17.63■□□□□ 0.41
Trim39-203ENSMUST00000113706 Scn10aQ6QIY3 1958 aa17.63■□□□□ 0.41
Trim39-203ENSMUST00000113706 Flot1O08917 428 aa17.63■□□□□ 0.41
Trim39-203ENSMUST00000113706 IkbkbO88351 757 aa17.63■□□□□ 0.41
Trim39-203ENSMUST00000113706 Pstpip1P97814 415 aa17.63■□□□□ 0.41
Trim39-203ENSMUST00000113706 Kif5bQ61768 963 aa17.63■□□□□ 0.41
Trim39-203ENSMUST00000113706 Ercc6lQ8BHK9 1240 aa17.63■□□□□ 0.41
Trim39-203ENSMUST00000113706 Appl2Q8K3G9 662 aa17.63■□□□□ 0.41
Trim39-203ENSMUST00000113706 FktnQ8R507 461 aa17.63■□□□□ 0.41
Trim39-203ENSMUST00000113706 NkapQ9D0F4 415 aaKnown RBP17.63■□□□□ 0.41
Trim39-203ENSMUST00000113706 Extl2Q9ES89 330 aa17.63■□□□□ 0.41
Trim39-203ENSMUST00000113706 Pdcd6ipQ9WU78 869 aaKnown RBP17.63■□□□□ 0.41
Trim39-203ENSMUST00000113706 B3galt4Q9Z0F0 371 aa17.63■□□□□ 0.41
Trim39-203ENSMUST00000113706 Orc4O88708 433 aa17.62■□□□□ 0.41
Trim39-203ENSMUST00000113706 Paxbp1P58501 919 aa17.62■□□□□ 0.41
Trim39-203ENSMUST00000113706 Pgrmc2Q80UU9 217 aaKnown RBP17.62■□□□□ 0.41
Trim39-203ENSMUST00000113706 Prpf40bQ80W14 870 aa17.62■□□□□ 0.41
Trim39-203ENSMUST00000113706 Cep95Q8BVV7 827 aa17.62■□□□□ 0.41
Trim39-203ENSMUST00000113706 Fam76aQ922G2 307 aa17.62■□□□□ 0.41
Trim39-203ENSMUST00000113706 Polr2aP08775 1970 aaKnown RBP17.62■□□□□ 0.41
Trim39-203ENSMUST00000113706 Dcdc2bF7BCK0 340 aa17.62■□□□□ 0.41
Trim39-203ENSMUST00000113706 Scgb2b19J3QM75 112 aa17.62■□□□□ 0.41
Trim39-203ENSMUST00000113706 Cbx1P83917 185 aaKnown RBP17.62■□□□□ 0.41
Trim39-203ENSMUST00000113706 Trim25Q61510 634 aaKnown RBP17.62■□□□□ 0.41
Trim39-203ENSMUST00000113706 Psmd2Q8VDM4 908 aa17.62■□□□□ 0.41
Trim39-203ENSMUST00000113706 Dqx1Q924H9 718 aa17.62■□□□□ 0.41
Trim39-203ENSMUST00000113706 Dph1Q5NCQ5 438 aa17.62■□□□□ 0.41
Trim39-203ENSMUST00000113706 Haus2Q9CQS9 234 aa17.62■□□□□ 0.41
Trim39-203ENSMUST00000113706 Uso1Q9Z1Z0 959 aaKnown RBP17.62■□□□□ 0.41
Trim39-203ENSMUST00000113706 Ppp1r9aH3BJD6 1292 aa17.61■□□□□ 0.41
Trim39-203ENSMUST00000113706 Spice1Q8C804 860 aa17.61■□□□□ 0.41
Trim39-203ENSMUST00000113706 March8Q9DBD2 286 aa17.61■□□□□ 0.41
Trim39-203ENSMUST00000113706 Gm38392E9Q2A2 434 aa17.61■□□□□ 0.41
Trim39-203ENSMUST00000113706 Cyp2c68K7N6C2 491 aa17.61■□□□□ 0.41
Trim39-203ENSMUST00000113706 L1camP11627 1260 aa17.61■□□□□ 0.41
Trim39-203ENSMUST00000113706 Psmb7P70195 277 aa17.61■□□□□ 0.41
Trim39-203ENSMUST00000113706 Znf280dQ68FE8 974 aa17.61■□□□□ 0.41
Trim39-203ENSMUST00000113706 Tada3Q8R0L9 432 aa17.61■□□□□ 0.41
Trim39-203ENSMUST00000113706 Kdm4bQ91VY5 1086 aa17.61■□□□□ 0.41
Trim39-203ENSMUST00000113706 Ercc4Q9QZD4 917 aa17.61■□□□□ 0.41
Trim39-203ENSMUST00000113706 Mrvi1Q9WUX5 899 aaKnown RBP17.61■□□□□ 0.41
Trim39-203ENSMUST00000113706 Magea10A2AMW4 325 aa17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 Krt36B1AQ75 473 aa17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 ArP19091 899 aa17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 Rad23aP54726 363 aa17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 Ccdc102aQ3TMW1 549 aa17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 Secisbp2lQ6A098 1086 aaKnown RBP17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 Rfc4Q99J62 364 aa17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 Kcnq2Q9Z351 759 aa17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 Smchd1Q6P5D8 2007 aaKnown RBP17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 Ripor3A1L3T7 938 aa17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 Skint3A7TZF0 458 aa17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 H2afxP27661 143 aaKnown RBP17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 LeprP48356 1162 aa17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 Ccdc84Q4VA36 332 aaKnown RBP17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 Kcnv2Q8CFS6 562 aa17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 Tbx18Q9EPZ6 613 aa17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 Egfl6Q9JJZ5 550 aa17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 Etnk2A7MCT6 385 aa17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 SarsP26638 512 aaKnown RBP17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 Chp1P61022 195 aa17.6■□□□□ 0.41
Trim39-203ENSMUST00000113706 PtgdrP70263 357 aa17.6■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 83.1 ms