RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Il16O54824 1322 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Calb1P12658 261 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Traf5P70191 558 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gucy2gQ6TL19 1100 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Ufl1Q8CCJ3 793 aaKnown RBP19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Snrnp27Q8K194 155 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Esr2O08537 530 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Hspa9P38647 679 aaKnown RBP19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Aipl1Q924K1 328 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Trpc4Q9QUQ5 974 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gucy2cQ3UWA6 1072 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Ankrd13dQ6PD24 605 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 PtprcP06800 1291 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Ric8aQ3TIR3 530 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Cbwd1Q8VEH6 393 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Tbkbp1A2A9T0 611 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm38392E9Q2A2 434 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Q80ZQ3 298 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 4930519G04RikQ9CPT7 205 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 MlklQ9D2Y4 472 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Cpsf3Q9QXK7 684 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Apba1B2RUJ5 842 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm10250G3X9L6 160 aaKnown RBP19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 VcpQ01853 806 aaKnown RBP19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Krt74Q6IFZ9 495 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Iars2Q8BIJ6 1012 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Atp5hQ9DCX2 161 aa19.74■□□□□ 0.75
Trim71-201ENSMUST00000111816 Armc2Q3URY6 854 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 Mdm2P23804 489 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 Q8BWG4 1187 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 Abcf2Q99LE6 628 aaKnown RBP19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 Timm50Q9D880 353 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 Tnfrsf10bQ9QZM4 381 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 Top3bQ9Z321 862 aaKnown RBP19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 S100gP97816 79 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 Q3UJC8 639 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 DeptorQ570Y9 409 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 AmphQ7TQF7 686 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 HnmtQ91VF2 295 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm8879F6R3J9 157 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm8922F6XVS9 199 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 Pcgf5Q3UK78 256 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 FanclQ9CR14 375 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 Bnip3lQ9Z2F7 218 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 Krt6bQ9Z331 562 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 Krt6aP50446 553 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 Sp4Q62445 782 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 Stx18Q8VDS8 334 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 CitP49025 2055 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 Plekha5E9Q6H8 1269 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 Smap1Q91VZ6 440 aa19.73■□□□□ 0.75
Trim71-201ENSMUST00000111816 Axdnd1Q3UZ57 424 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Ano8Q6PB70 1060 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 4931423N10RikQ9D4J9 382 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm29276A0A087WNW5 222 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm21117A0A087WPJ9 222 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm20820A0A087WPP3 222 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm20937A0A087WQA3 222 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm21258A0A087WQC7 222 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm28102A0A087WQL3 222 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm21095A0A087WR14 222 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm20792A0A087WRF5 222 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm21865A0A087WRL2 222 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm28576A0A087WRP6 222 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm28490A0A087WRT9 222 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm21294A0A087WS79 222 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm20824A0A087WS97 222 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm21996A0A087WSS9 222 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm28870A0A0A6YW38 222 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm29866A0A0A6YX04 222 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Stx7O70439 261 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm21627Q810R0 219 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Casp12O08736 419 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Stam2O88811 523 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Szrd1Q6NXN1 152 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Kctd6Q8BNL5 237 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Zkscan3Q91VW9 553 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Fam81bA0A140LI28 432 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Zfp174B9EJW5 407 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Impg2Q80XH2 1243 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Atp11cQ9QZW0 1129 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 1700006A11RikB9EHI3 544 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Rufy4Q3TYX8 563 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 4930513O06RikQ9D549 161 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Mdh1P14152 334 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Erp29P57759 262 aaKnown RBP19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Mrps15Q9DC71 258 aaKnown RBP19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Atp8b2P98199 1209 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Trim63Q38HM4 350 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 GmncQ3URY2 333 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Nup50Q9JIH2 466 aaKnown RBP19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Pcdha7Q91Y13 937 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Crlf3Q9Z2L7 442 aa19.72■□□□□ 0.75
Trim71-201ENSMUST00000111816 Serpina3iD3Z450 408 aa19.71■□□□□ 0.75
Trim71-201ENSMUST00000111816 Dlgap3Q6PFD5 977 aa19.71■□□□□ 0.75
Trim71-201ENSMUST00000111816 TpbpaP13438 124 aa19.71■□□□□ 0.75
Trim71-201ENSMUST00000111816 Slc25a13Q9QXX4 676 aa19.71■□□□□ 0.75
Trim71-201ENSMUST00000111816 TnksQ6PFX9 1320 aa19.71■□□□□ 0.75
Trim71-201ENSMUST00000111816 Cdh2P15116 906 aa19.71■□□□□ 0.75
Trim71-201ENSMUST00000111816 HarsQ61035 509 aa19.71■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms