RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Kri1Q8VDQ9 704 aaKnown RBP25.56■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Npm3Q9CPP0 175 aaKnown RBP25.56■■□□□ 1.68
Upf3a-201ENSMUST00000043767 PpatQ8CIH9 517 aa25.56■■□□□ 1.68
Upf3a-201ENSMUST00000043767 B020004C17RikJ3QP07 232 aa25.55■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Nbr1P97432 988 aa25.55■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Sox10Q04888 466 aa25.55■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Ildr1Q8CBR1 537 aa25.55■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Fermt2Q8CIB5 680 aa25.55■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Ces4aQ8R0W5 563 aa25.55■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Dhx30Q99PU8 1217 aaKnown RBP25.55■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Kcnh7Q9ER47 1195 aa25.55■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Smchd1Q6P5D8 2007 aaKnown RBP25.55■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Gm4758L7N258 96 aa25.54■■□□□ 1.68
Upf3a-201ENSMUST00000043767 PgfP49764 158 aa25.54■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Usp13Q5BKP2 858 aa25.54■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Cep135Q6P5D4 1140 aa25.54■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Q8BZJ8 459 aa25.54■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Brms1Q99N20 246 aa25.54■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Cpb1B2RS76 415 aa25.54■■□□□ 1.68
Upf3a-201ENSMUST00000043767 HunkO88866 714 aa25.54■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Mcm6P97311 821 aa25.54■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Dph1Q5NCQ5 438 aa25.54■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Kif5bQ61768 963 aa25.54■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Thap3Q8BJ25 218 aa25.54■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Tmem87aQ8BXN9 555 aa25.54■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Itm2cQ91VK4 269 aa25.54■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Msh3P13705 1091 aa25.53■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Spryd7Q3TFQ1 196 aa25.53■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Gm10392Q3V3I3 114 aa25.53■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Alpk1Q9CXB8 1231 aa25.53■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Grin2dQ03391 1323 aa25.53■■□□□ 1.68
Upf3a-201ENSMUST00000043767 SpibO35906 267 aa25.52■■□□□ 1.68
Upf3a-201ENSMUST00000043767 MyocO70624 490 aa25.52■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Magea8O89012 320 aa25.52■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Slain1Q68FF7 579 aa25.52■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Aggf1Q7TN31 711 aa25.52■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Zfp397Q7TNK4 527 aa25.52■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Hsdl1Q8BTX9 330 aa25.52■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Pgm5Q8BZF8 567 aa25.52■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Kremen1Q99N43 473 aa25.52■■□□□ 1.68
Upf3a-201ENSMUST00000043767 SrcapA0A087WQ44 3271 aa25.52■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Gjd2O54851 321 aa25.52■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Krt18P05784 423 aa25.52■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Ddx19bQ8BZY3 494 aa25.52■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Dph6Q9CQ28 267 aa25.52■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Filip1Q9CS72 1211 aa25.52■■□□□ 1.68
Upf3a-201ENSMUST00000043767 SetQ9EQU5 289 aaKnown RBP25.52■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Bub1bQ9Z1S0 1052 aa25.52■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Herc3A6H6S0 1050 aa25.51■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Card6E9PWH2 1175 aa25.51■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Nfatc2ipO09130 412 aa25.51■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Pik3r1P26450 724 aa25.51■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Taf3Q5HZG4 932 aa25.51■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Gas7Q60780 421 aa25.51■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Ccdc122Q8BVN0 290 aa25.51■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Trim47Q8C0E3 641 aa25.51■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Dennd2aQ8C4S8 1000 aa25.51■■□□□ 1.67
Upf3a-201ENSMUST00000043767 RnpepQ8VCT3 650 aaKnown RBP25.51■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Rassf3Q99P51 232 aa25.51■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Vps33aQ9D2N9 598 aa25.51■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Baiap2l1Q9DBJ3 514 aa25.51■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Slc26a4Q9R155 780 aa25.51■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Gcnt4E9Q649 455 aa25.51■■□□□ 1.67
Upf3a-201ENSMUST00000043767 AunipE9Q6Z5 340 aa25.51■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Krt79Q8VED5 531 aa25.51■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Slc25a38Q91XD8 326 aa25.51■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Josd2Q9CR30 188 aa25.51■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Psmc2P46471 433 aa25.5■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Tdo2P48776 406 aa25.5■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Anks1aP59672 1150 aa25.5■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Erbb2P70424 1256 aa25.5■■□□□ 1.67
Upf3a-201ENSMUST00000043767 YdjcQ14BV6 310 aa25.5■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Pbxip1Q3TVI8 727 aa25.5■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Entpd3Q8BFW6 529 aa25.5■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Ppp1r3gQ9CW07 347 aa25.5■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Prl2c5Q9JLV9 222 aa25.5■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Celf5D3Z4T1 395 aaKnown RBP25.49■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Atp9aO70228 1047 aa25.49■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Psmc6P62334 389 aa25.49■■□□□ 1.67
Upf3a-201ENSMUST00000043767 4933427I04RikQ3V053 235 aa25.49■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Gpd2Q64521 727 aa25.49■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Trim9Q8C7M3 817 aa25.49■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Bcas3Q8CCN5 928 aa25.49■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Nap1l5Q9JJF0 156 aa25.49■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Dhx15O35286 795 aaKnown RBP25.49■■□□□ 1.67
Upf3a-201ENSMUST00000043767 TfrcQ62351 763 aaKnown RBP25.49■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Rusc1Q8BG26 893 aa25.49■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Mbtps2Q8CHX6 515 aa25.49■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Med24Q99K74 987 aa25.49■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Pgap3A2A559 320 aa25.48■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Tmem63bQ3TWI9 832 aa25.48■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Ppp2r5cQ60996 524 aa25.48■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Zfp91Q62511 572 aa25.48■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Git2Q9JLQ2 708 aa25.48■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Gm5624F6ZZG8 207 aa25.48■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Fdxacb1Q3UY23 622 aa25.48■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Trpc6Q61143 930 aa25.48■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Gba2Q69ZF3 918 aa25.48■■□□□ 1.67
Upf3a-201ENSMUST00000043767 Arid5bQ8BM75 1188 aaKnown RBP25.48■■□□□ 1.67
Upf3a-201ENSMUST00000043767 MyocdQ8VIM5 935 aa25.48■■□□□ 1.67
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms