RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Q8VDP2 222 aa22.33■■□□□ 1.17
Ctdsp1-201ENSMUST00000027367 Etnk2A7MCT6 385 aa22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 FosP01101 380 aa22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Psmb7P70195 277 aa22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 PrimpolQ6P1E7 537 aa22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Vgll2Q8BGW8 322 aa22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Yars2Q8BYL4 472 aaKnown RBP22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Sh2b1Q91ZM2 756 aa22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Atp1a4Q9WV27 1032 aa22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Zc3h7bF8VPP8 982 aaKnown RBP22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Dnm2P39054 870 aaKnown RBP22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 KhsrpQ3U0V1 748 aaKnown RBP22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Ccdc114Q3UX62 658 aa22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Znf280dQ68FE8 974 aa22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Rexo1Q7TT28 1213 aa22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Dppa3Q8QZY3 150 aa22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Cacnb1Q8R3Z5 597 aa22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Havcr2Q8VIM0 281 aa22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Prc1Q99K43 603 aaKnown RBP22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 CutaQ9CQ89 177 aa22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Ankrd35E9Q9D8 996 aa22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Kbtbd4Q8R179 534 aa22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 GrapQ9CX99 217 aa22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 March8Q9DBD2 286 aa22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Trpc5Q9QX29 975 aa22.32■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Mageb2A2AHM0 380 aa22.31■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Esr2O08537 530 aa22.31■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Wnt10bP48614 389 aa22.31■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Lgr6Q3UVD5 967 aa22.31■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Gpsm2Q8VDU0 679 aa22.31■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Mrpl11Q9CQF0 192 aaKnown RBP22.31■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Scn3aA2ASI5 1947 aa22.31■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Cacna1fQ9JIS7 1985 aa22.31■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Pip4k2aO70172 405 aa22.31■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Nap1l1P28656 391 aaKnown RBP22.31■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Chp1P61022 195 aa22.31■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Trim25Q61510 634 aaKnown RBP22.31■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Stxbp2Q64324 593 aa22.31■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Slc9c1Q6UJY2 1175 aa22.31■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Scfd2Q8BTY8 684 aa22.31■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Taf1dQ9D4V4 322 aa22.31■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Prl2c2P04095 224 aa22.3■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 LdhbP16125 334 aaKnown RBP22.3■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Irx1P81068 480 aa22.3■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Psmd1Q3TXS7 953 aa22.3■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Tmem35bQ3U0Y2 150 aa22.3■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Cracr2bQ80ZJ8 394 aa22.3■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Spire2Q8K1S6 718 aa22.3■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Ddah1Q9CWS0 285 aa22.3■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Coro7Q9D2V7 922 aa22.3■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Cep83Q9D5R3 692 aa22.3■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Rad23aP54726 363 aa22.3■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Hmgb1P63158 215 aaKnown RBP22.3■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Pstpip1P97814 415 aa22.3■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Zhx2Q8C0C0 836 aaKnown RBP22.3■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Tdrd3Q91W18 743 aaKnown RBP22.3■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Josd2Q9CR30 188 aa22.3■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 MtrA6H5Y3 1253 aa22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Scgb2b19J3QM75 112 aa22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 SarsP26638 512 aaKnown RBP22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Hoxa11P31311 313 aa22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Zfp781Q0P5U5 243 aa22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Nsun7Q14AW5 724 aa22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Rgl1Q60695 768 aa22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Epn1Q80VP1 575 aa22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Fbxo28Q8BIG4 368 aa22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 MyripQ8K3I4 856 aa22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Psmd2Q8VDM4 908 aa22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Grin3bQ91ZU9 1003 aa22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Haus2Q9CQS9 234 aa22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Cmtm5Q9D6G9 156 aa22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Chrna9G3X8Z7 479 aa22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Pde4aO89084 844 aa22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 AgtP11859 477 aa22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Tph1P17532 447 aa22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 PtgdrP70263 357 aa22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Meis1Q60954 390 aa22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Mettl16Q9CQG2 553 aaKnown RBP22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 RnmtQ9D0L8 465 aaKnown RBP22.29■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Gm42641I6L9G2 585 aa22.28■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Churc1Q6DG52 112 aa22.28■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Senp6Q6P7W0 1132 aa22.28■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 AtripQ8BMG1 785 aa22.28■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Tspoap1Q7TNF8 1846 aa22.28■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Magea10A2AMW4 325 aa22.28■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 CatspereP0DP43 985 aa22.28■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Psmc6P62334 389 aa22.28■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Mindy1Q76LS9 468 aa22.28■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Eif2ak1Q9Z2R9 619 aa22.28■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 NpcdF8VQB8 469 aa22.28■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Dnajb6O54946 365 aa22.28■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 IkbkbO88351 757 aa22.28■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Orc4O88708 433 aa22.28■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Fam217aQ9D9W6 419 aa22.28■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Q9DAQ4 598 aa22.28■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Dnajc7Q9QYI3 494 aa22.28■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 LarsQ8BMJ2 1178 aa22.27■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Cc2d1bQ8BRN9 848 aa22.27■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Slc9b1Q8C0X2 565 aa22.27■■□□□ 1.16
Ctdsp1-201ENSMUST00000027367 Znf131Q8K3J5 619 aa22.27■■□□□ 1.16
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms