RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Gm7168A0AUV4 508 aa18.14■□□□□ 0.49
Shh-201ENSMUST00000002708 Pdrg1P59048 133 aa18.14■□□□□ 0.49
Shh-201ENSMUST00000002708 Map3k12Q60700 888 aa18.14■□□□□ 0.49
Shh-201ENSMUST00000002708 Exoc3Q6KAR6 755 aa18.14■□□□□ 0.49
Shh-201ENSMUST00000002708 Tlr11Q6R5P0 926 aa18.14■□□□□ 0.49
Shh-201ENSMUST00000002708 Camsap3Q80VC9 1252 aa18.14■□□□□ 0.49
Shh-201ENSMUST00000002708 Ppp1r11Q8K1L5 131 aa18.14■□□□□ 0.49
Shh-201ENSMUST00000002708 Cacnb1Q8R3Z5 597 aa18.14■□□□□ 0.49
Shh-201ENSMUST00000002708 Ces1Q8VCC2 565 aa18.14■□□□□ 0.49
Shh-201ENSMUST00000002708 Glrx3Q9CQM9 337 aa18.14■□□□□ 0.49
Shh-201ENSMUST00000002708 Tmem191cQ9JJB1 302 aa18.14■□□□□ 0.49
Shh-201ENSMUST00000002708 Tacc2Q9JJG0 1149 aa18.14■□□□□ 0.49
Shh-201ENSMUST00000002708 Orc1Q9Z1N2 840 aaKnown RBP18.14■□□□□ 0.49
Shh-201ENSMUST00000002708 Zfp646Q6NV66 1788 aa18.14■□□□□ 0.49
Shh-201ENSMUST00000002708 Cntnap1O54991 1385 aa18.14■□□□□ 0.49
Shh-201ENSMUST00000002708 Pip4k2aO70172 405 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Msh3P13705 1091 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Hps5P59438 1126 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Serpinb6dQ3UWK8 375 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Ces1eQ64176 562 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Sdccag8Q80UF4 717 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Tcp10aQ80W76 438 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Golph3Q9CRA5 298 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Ptf1aQ9QX98 324 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Akr1b10G5E895 316 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Krt18P05784 423 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Lig1P37913 916 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Cacnb3P54285 484 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Acbd5Q5XG73 508 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Dclk3Q8BWQ5 790 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Slc13a4Q8BZ82 625 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Krt79Q8VED5 531 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Ube2sQ921J4 223 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Ubxn1Q922Y1 297 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 AacsQ9D2R0 672 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Ccdc105Q9D4K7 499 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Serpinb12Q9D7P9 423 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Fxr2Q9WVR4 673 aaKnown RBP18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Arhgap6O54834 987 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Gjc1P28229 396 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Wdr70Q3TWF6 657 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 NntQ61941 1086 aaKnown RBP18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Znf771Q8BJ90 317 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 IntS13Q8QZV7 732 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Sept14Q9DA97 430 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 SyncQ9EPM5 470 aa18.13■□□□□ 0.49
Shh-201ENSMUST00000002708 Adam7O35227 789 aa18.12■□□□□ 0.49
Shh-201ENSMUST00000002708 Abcb4P21440 1276 aa18.12■□□□□ 0.49
Shh-201ENSMUST00000002708 Vcam1P29533 739 aa18.12■□□□□ 0.49
Shh-201ENSMUST00000002708 Nedd4P46935 887 aaKnown RBP18.12■□□□□ 0.49
Shh-201ENSMUST00000002708 Mapk6Q61532 720 aa18.12■□□□□ 0.49
Shh-201ENSMUST00000002708 Ears2Q9CXJ1 523 aa18.12■□□□□ 0.49
Shh-201ENSMUST00000002708 Akr1b1P45376 316 aa18.12■□□□□ 0.49
Shh-201ENSMUST00000002708 Atp6v1aP50516 617 aaKnown RBP18.12■□□□□ 0.49
Shh-201ENSMUST00000002708 Cc2d1bQ8BRN9 848 aa18.12■□□□□ 0.49
Shh-201ENSMUST00000002708 AopepQ8BXQ6 817 aa18.12■□□□□ 0.49
Shh-201ENSMUST00000002708 Morc2bQ8C5W4 1022 aa18.12■□□□□ 0.49
Shh-201ENSMUST00000002708 Rcor2Q8C796 523 aa18.12■□□□□ 0.49
Shh-201ENSMUST00000002708 Sugp2Q8CH09 1067 aa18.12■□□□□ 0.49
Shh-201ENSMUST00000002708 KynuQ9CXF0 464 aa18.12■□□□□ 0.49
Shh-201ENSMUST00000002708 Ankrd35E9Q9D8 996 aa18.11■□□□□ 0.49
Shh-201ENSMUST00000002708 Usp17lbE9Q9U0 468 aa18.11■□□□□ 0.49
Shh-201ENSMUST00000002708 Kcnma1Q08460 1209 aa18.11■□□□□ 0.49
Shh-201ENSMUST00000002708 Fhdc1Q3ULZ2 1149 aa18.11■□□□□ 0.49
Shh-201ENSMUST00000002708 Pacsin1Q61644 441 aa18.11■□□□□ 0.49
Shh-201ENSMUST00000002708 GnptabQ69ZN6 1235 aa18.11■□□□□ 0.49
Shh-201ENSMUST00000002708 Maip1Q8BHE8 291 aa18.11■□□□□ 0.49
Shh-201ENSMUST00000002708 Mmgt1Q8K273 131 aaKnown RBP18.11■□□□□ 0.49
Shh-201ENSMUST00000002708 Erlin1Q91X78 346 aa18.11■□□□□ 0.49
Shh-201ENSMUST00000002708 Asic2Q925H0 512 aa18.11■□□□□ 0.49
Shh-201ENSMUST00000002708 Ccdc88cQ6VGS5 2009 aa18.11■□□□□ 0.49
Shh-201ENSMUST00000002708 Setd4P58467 439 aa18.11■□□□□ 0.49
Shh-201ENSMUST00000002708 Hmgb1P63158 215 aaKnown RBP18.11■□□□□ 0.49
Shh-201ENSMUST00000002708 Skor1Q8BX46 964 aa18.11■□□□□ 0.49
Shh-201ENSMUST00000002708 Col4a5Q63ZW6 1691 aa18.11■□□□□ 0.49
Shh-201ENSMUST00000002708 Armc3A2AU72 881 aa18.1■□□□□ 0.49
Shh-201ENSMUST00000002708 Guca2bO09051 106 aa18.1■□□□□ 0.49
Shh-201ENSMUST00000002708 MybP06876 636 aa18.1■□□□□ 0.49
Shh-201ENSMUST00000002708 Eps15P42567 897 aa18.1■□□□□ 0.49
Shh-201ENSMUST00000002708 Hsd17b1P51656 344 aa18.1■□□□□ 0.49
Shh-201ENSMUST00000002708 Surf6P70279 355 aaKnown RBP18.1■□□□□ 0.49
Shh-201ENSMUST00000002708 Sh3gl1Q62419 368 aa18.1■□□□□ 0.49
Shh-201ENSMUST00000002708 PigsQ6PD26 555 aaKnown RBP18.1■□□□□ 0.49
Shh-201ENSMUST00000002708 BC048507Q80ZS7 89 aa18.1■□□□□ 0.49
Shh-201ENSMUST00000002708 AdnpQ9Z103 1108 aaKnown RBP18.1■□□□□ 0.49
Shh-201ENSMUST00000002708 Mtmr2Q9Z2D1 643 aa18.1■□□□□ 0.49
Shh-201ENSMUST00000002708 Gm28919A0A087WP35 240 aa18.1■□□□□ 0.49
Shh-201ENSMUST00000002708 Gja5Q01231 358 aa18.1■□□□□ 0.49
Shh-201ENSMUST00000002708 Hdhd2Q3UGR5 259 aa18.1■□□□□ 0.49
Shh-201ENSMUST00000002708 Cd37Q61470 281 aa18.1■□□□□ 0.49
Shh-201ENSMUST00000002708 Cul5Q9D5V5 780 aa18.1■□□□□ 0.49
Shh-201ENSMUST00000002708 Rwdd2aQ9D9S3 292 aa18.1■□□□□ 0.49
Shh-201ENSMUST00000002708 Map7d1A2AJI0 846 aa18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 Fbln1Q08879 705 aa18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 Znf697Q569E7 569 aa18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 Tlr13Q6R5N8 991 aa18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 Phf8Q80TJ7 1023 aa18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 Hirip3Q8BLH7 601 aa18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 Kiaa1024Q8K3V7 917 aa18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 Stx17Q9D0I4 301 aa18.09■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 51.4 ms