RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Casp2P29594 452 aa9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 ItkQ03526 625 aa9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Mylk3Q3UIZ8 795 aa9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 P2rx5Q3UYI1 455 aa9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Sdf4Q61112 361 aa9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 GartQ64737 1010 aa9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Wdr60Q8C761 999 aa9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Zcrb1Q9CZ96 217 aaKnown RBP9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Abcb6Q9DC29 842 aa9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Usp42B2RQC2 1324 aaKnown RBP9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Adcy9P51830 1353 aa9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Yeats2Q3TUF7 1407 aa9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Serpinb8O08800 374 aaKnown RBP9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Nr1i3O35627 358 aa9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Mdh1P14152 334 aa9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Q3KNL4 93 aa9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Aifm3Q3TY86 605 aa9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Gdap1l1Q8VE33 370 aa9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ppp2r5dQ91V89 594 aa9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 PlvapQ91VC4 438 aa9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 St13Q99L47 371 aaKnown RBP9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Spc24Q9D083 201 aa9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ccdc97Q9DBT3 340 aa9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Dkc1Q9ESX5 509 aaKnown RBP9.88□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ttc13A0A1L1SSC7 844 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Maml3D4QGC2 1135 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Atp8a1P70704 1164 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Cep70Q6IQY5 616 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Pabpc4Q6PHQ9 660 aaKnown RBP9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Cfap36Q8C6E0 343 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Nek9Q8K1R7 984 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Lrrc59Q922Q8 307 aaKnown RBP9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Abcg3Q99P81 650 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Psma8Q9CWH6 250 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Alpk1Q9CXB8 1231 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Tex21Q9R0U9 575 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Gpaa1Q9WTK3 621 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Otud7bB2RUR8 840 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Pcdhb9E9Q5G2 828 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Pde9aO70628 534 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Stat5bP42232 786 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 IvlP48997 467 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Krt74Q6IFZ9 495 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Trerf1Q8BXJ2 1205 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 H6pdQ8CFX1 789 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Vmn1r199Q8R280 367 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ifi35Q9D8C4 286 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 PapolbQ9WVP6 641 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 A630010A05RikA9C473 232 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ccnyl1D3YUJ3 367 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Syt2P46097 422 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Vps4bP46467 444 aaKnown RBP9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Churc1Q6DG52 112 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Oxsr1Q6P9R2 527 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ripor2Q80U16 1078 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 SybuQ8BHS8 665 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ero1aQ8R180 464 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ttc1Q91Z38 292 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Zswim7Q9CWQ2 152 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Krt34Q9D646 392 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ccdc182Q9D9C6 152 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Pold3Q9EQ28 462 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Sdccag3A2AIW0 432 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Zfp956Q3UZY6 572 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Gucy2fQ5SDA5 1108 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ppp1r14cQ8R4S0 164 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 RpainQ9CWY9 219 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Arl2bpQ9D385 163 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Trmt112Q9DCG9 125 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Gtf2iQ9ESZ8 998 aaKnown RBP9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Stk39Q9Z1W9 556 aa9.87□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 DohhA0A1Y7VJ29 135 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Pdzd8B9EJ80 1147 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Gdap1O88741 358 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Gnrh1P13562 90 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Arl4cP61208 192 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Krt39Q6IFX4 482 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 NemfQ8CCP0 1064 aaKnown RBP9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Setd3Q91WC0 594 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 CsadQ9DBE0 493 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ndst4Q9EQW8 872 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 AatfQ9JKX4 526 aaKnown RBP9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Cog1Q9Z160 980 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Kdm3bQ6ZPY7 1562 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Gm45194A0A140LJG2 572 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Veph1A1A535 833 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Atp6v1e1P50518 226 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Olfm3P63056 478 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Rps6kc1Q8BLK9 1056 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Vps37aQ8CHS8 397 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Slc26a6Q8CIW6 758 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Tgif2lx2Q8K5B9 231 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Pomgnt1Q91X88 660 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Pabpc1lA2A5N3 607 aaKnown RBP9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Zfp850J3QPC5 689 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Krt10P02535 570 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Krt80Q0VBK2 452 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 HarsQ61035 509 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Dcaf15Q6PFH3 600 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Phf20l1Q8CCJ9 1013 aa9.86□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms