RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB4	YPR056W	COS5	P47187	383 aa		5.88	□□□□□ -1.47
TFB4	YPR056W	BIO3	P50277	480 aa		5.88	□□□□□ -1.47
TFB4	YPR056W	YIP5	P53108	310 aa		5.88	□□□□□ -1.47
TFB4	YPR056W	DBP6	P53734	629 aa	Known RBP	5.88	□□□□□ -1.47
TFB4	YPR056W	IPI3	P53877	555 aa		5.88	□□□□□ -1.47
TFB4	YPR056W	URH1	Q04179	340 aa		5.88	□□□□□ -1.47
TFB4	YPR056W	FUS2	Q05670	677 aa		5.88	□□□□□ -1.47
TFB4	YPR056W	RRG8	Q06109	277 aa		5.88	□□□□□ -1.47
TFB4	YPR056W	COS7	Q07788	383 aa		5.88	□□□□□ -1.47
TFB4	YPR056W	GPN2	Q08726	347 aa	Predicted RBP	5.88	□□□□□ -1.47
TFB4	YPR056W	DSE3	Q08729	430 aa		5.88	□□□□□ -1.47
TFB4	YPR056W	TGS1	Q12052	315 aa		5.88	□□□□□ -1.47
TFB4	YPR056W	MED2	Q12124	431 aa		5.88	□□□□□ -1.47
TFB4	YPR056W	GET4	Q12125	312 aa		5.88	□□□□□ -1.47
TFB4	YPR056W	FMP16	Q12497	93 aa		5.88	□□□□□ -1.47
TFB4	YPR056W	BRR1	Q99177	341 aa	Predicted RBP	5.88	□□□□□ -1.47
TFB4	YPR056W	MF(ALPHA)1	P01149	165 aa		5.87	□□□□□ -1.47
TFB4	YPR056W	RPL24A	P04449	155 aa	Known RBP	5.87	□□□□□ -1.47
TFB4	YPR056W	CYM1	P32898	989 aa		5.87	□□□□□ -1.47
TFB4	YPR056W	PTR2	P32901	601 aa		5.87	□□□□□ -1.47
TFB4	YPR056W	MAL32	P38158	584 aa		5.87	□□□□□ -1.47
TFB4	YPR056W	YNG2	P38806	282 aa	Known RBP	5.87	□□□□□ -1.47
TFB4	YPR056W	RPS7B	P48164	190 aa	Known RBP	5.87	□□□□□ -1.47
TFB4	YPR056W	RIB4	P50861	169 aa	Predicted RBP	5.87	□□□□□ -1.47
TFB4	YPR056W	UBC11	P52492	156 aa		5.87	□□□□□ -1.47
TFB4	YPR056W	VOA1	P53262	265 aa		5.87	□□□□□ -1.47
TFB4	YPR056W	MAL12	P53341	584 aa		5.87	□□□□□ -1.47
TFB4	YPR056W	TEX1	P53851	422 aa	Known RBP	5.87	□□□□□ -1.47
TFB4	YPR056W	ARG5,6	Q01217	863 aa		5.87	□□□□□ -1.47
TFB4	YPR056W	REC102	Q02721	264 aa		5.87	□□□□□ -1.47
TFB4	YPR056W	YML122C	Q03207	126 aa		5.87	□□□□□ -1.47
TFB4	YPR056W	BNA7	Q04066	261 aa		5.87	□□□□□ -1.47
TFB4	YPR056W	NRT1	Q08485	598 aa		5.87	□□□□□ -1.47
TFB4	YPR056W	MRH1	Q12117	320 aa	Predicted RBP	5.87	□□□□□ -1.47
TFB4	YPR056W	YOS9	Q99220	542 aa		5.87	□□□□□ -1.47
TFB4	YPR056W	CAR1	P00812	333 aa	Known RBP	5.86	□□□□□ -1.47
TFB4	YPR056W	APA2	P22108	325 aa		5.86	□□□□□ -1.47
TFB4	YPR056W	KIN82	P25341	720 aa		5.86	□□□□□ -1.47
TFB4	YPR056W	LRE1	P25579	583 aa	Known RBP	5.86	□□□□□ -1.47
TFB4	YPR056W	RAD14	P28519	371 aa		5.86	□□□□□ -1.47
TFB4	YPR056W	ATP11	P32453	318 aa		5.86	□□□□□ -1.47
TFB4	YPR056W	SIP1	P32578	815 aa		5.86	□□□□□ -1.47
TFB4	YPR056W	GDH2	P33327	1092 aa	Known RBP	5.86	□□□□□ -1.47
TFB4	YPR056W	TIF3	P34167	436 aa	Known RBP	5.86	□□□□□ -1.47
TFB4	YPR056W	MNN2	P38069	597 aa		5.86	□□□□□ -1.47
TFB4	YPR056W	PCL5	P38794	229 aa		5.86	□□□□□ -1.47
TFB4	YPR056W	YJL193W	P39542	402 aa		5.86	□□□□□ -1.47
TFB4	YPR056W	VHS2	P40463	436 aa		5.86	□□□□□ -1.47
TFB4	YPR056W	STB2	P46679	850 aa		5.86	□□□□□ -1.47
TFB4	YPR056W	HAM1	P47119	197 aa	Known RBP	5.86	□□□□□ -1.47
TFB4	YPR056W	COS12	P53053	380 aa		5.86	□□□□□ -1.47
TFB4	YPR056W	BET4	Q00618	327 aa		5.86	□□□□□ -1.47
TFB4	YPR056W	SLT2	Q00772	484 aa		5.86	□□□□□ -1.47
TFB4	YPR056W	CAB5	Q03941	241 aa		5.86	□□□□□ -1.47
TFB4	YPR056W	DCS1	Q06151	350 aa		5.86	□□□□□ -1.47
TFB4	YPR056W	LEU4	P06208	619 aa	Known RBP	5.85	□□□□□ -1.47
TFB4	YPR056W	YML003W	P0CF16	290 aa		5.85	□□□□□ -1.47
TFB4	YPR056W	ZIP1	P31111	875 aa		5.85	□□□□□ -1.47
TFB4	YPR056W	UGP1	P32861	499 aa	Known RBP	5.85	□□□□□ -1.47
TFB4	YPR056W	MIA40	P36046	403 aa		5.85	□□□□□ -1.47
TFB4	YPR056W	YKL071W	P36086	256 aa		5.85	□□□□□ -1.47
TFB4	YPR056W	NUP133	P36161	1157 aa		5.85	□□□□□ -1.47
TFB4	YPR056W	APT2	P36973	181 aa		5.85	□□□□□ -1.47
TFB4	YPR056W	YJL206C	P39529	758 aa		5.85	□□□□□ -1.47
TFB4	YPR056W	PRM9	P39551	298 aa		5.85	□□□□□ -1.47
TFB4	YPR056W	AIM22	P47051	409 aa		5.85	□□□□□ -1.47
TFB4	YPR056W	YGR067C	P53243	804 aa		5.85	□□□□□ -1.47
TFB4	YPR056W	DRN1	P53255	507 aa	Known RBP	5.85	□□□□□ -1.47
TFB4	YPR056W	EKI1	Q03764	534 aa		5.85	□□□□□ -1.47
TFB4	YPR056W	APC4	Q04601	652 aa		5.85	□□□□□ -1.47
TFB4	YPR056W	HOF1	Q05080	669 aa		5.85	□□□□□ -1.47
TFB4	YPR056W	RTT103	Q05543	409 aa		5.85	□□□□□ -1.47
TFB4	YPR056W	MCM21	Q06675	368 aa		5.85	□□□□□ -1.47
TFB4	YPR056W	CRT10	Q08226	957 aa		5.85	□□□□□ -1.47
TFB4	YPR056W	BSC6	Q08280	497 aa		5.85	□□□□□ -1.47
TFB4	YPR056W	VIK1	Q12045	647 aa		5.85	□□□□□ -1.47
TFB4	YPR056W	DCP1	Q12517	231 aa	Predicted RBP	5.85	□□□□□ -1.47
TFB4	YPR056W	MTR10	Q99189	972 aa		5.85	□□□□□ -1.47
TFB4	YPR056W	MRP13	P12686	339 aa		5.84	□□□□□ -1.47
TFB4	YPR056W	PEP5	P12868	1029 aa		5.84	□□□□□ -1.47
TFB4	YPR056W	CDC43	P18898	376 aa		5.84	□□□□□ -1.47
TFB4	YPR056W	SAR1	P20606	190 aa	Known RBP	5.84	□□□□□ -1.47
TFB4	YPR056W	YIM1	P28625	365 aa		5.84	□□□□□ -1.47
TFB4	YPR056W	ERG7	P38604	731 aa		5.84	□□□□□ -1.47
TFB4	YPR056W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.84	□□□□□ -1.47	not detected
TFB4	YPR056W	MFM1	Q02783	413 aa		5.84	□□□□□ -1.47
TFB4	YPR056W	WAR1	Q03631	944 aa		5.84	□□□□□ -1.47
TFB4	YPR056W	HMO1	Q03973	246 aa	Known RBP	5.84	□□□□□ -1.47
TFB4	YPR056W	GIM5	Q04493	163 aa		5.84	□□□□□ -1.47
TFB4	YPR056W	ARG7	Q04728	441 aa		5.84	□□□□□ -1.47
TFB4	YPR056W	NDL1	Q06568	189 aa		5.84	□□□□□ -1.47
TFB4	YPR056W	YPR078C	Q06813	372 aa		5.84	□□□□□ -1.47
TFB4	YPR056W	SMC5	Q08204	1093 aa		5.84	□□□□□ -1.47
TFB4	YPR056W	BTS1	Q12051	335 aa		5.84	□□□□□ -1.47
TFB4	YPR056W	YOR012W	Q12351	137 aa		5.84	□□□□□ -1.47
TFB4	YPR056W	POM34	Q12445	299 aa		5.84	□□□□□ -1.47
TFB4	YPR056W	YDL007C-A	Q2V2Q0	85 aa		5.84	□□□□□ -1.47
TFB4	YPR056W	ECM3	Q99252	613 aa		5.84	□□□□□ -1.47
TFB4	YPR056W	SIR3	P06701	978 aa		5.83	□□□□□ -1.48
TFB4	YPR056W	CDC21	P06785	304 aa		5.83	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms