RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C DAL4Q04895 635 aa3.28□□□□□ -1.88
RPA135YPR010C SMF3Q12078 473 aaPredicted RBP3.28□□□□□ -1.88
RPA135YPR010C YPL245WQ12179 454 aaKnown RBP3.28□□□□□ -1.88
RPA135YPR010C UNG1P12887 359 aa3.27□□□□□ -1.89
RPA135YPR010C RSR1P13856 272 aa3.27□□□□□ -1.89
RPA135YPR010C MRPS28P21771 286 aa3.27□□□□□ -1.89
RPA135YPR010C GRR1P24814 1151 aa3.27□□□□□ -1.89
RPA135YPR010C SIS1P25294 352 aaKnown RBP3.27□□□□□ -1.89
RPA135YPR010C RPL5P26321 297 aaKnown RBP3.27□□□□□ -1.89
RPA135YPR010C YJU2P28320 278 aaPredicted RBP3.27□□□□□ -1.89
RPA135YPR010C ATP7P30902 174 aa3.27□□□□□ -1.89
RPA135YPR010C AAR2P32357 355 aaPredicted RBP3.27□□□□□ -1.89
RPA135YPR010C LHS1P36016 881 aa3.27□□□□□ -1.89
RPA135YPR010C IRS4P36115 615 aaKnown RBP3.27□□□□□ -1.89
RPA135YPR010C ECM4P36156 370 aa3.27□□□□□ -1.89
RPA135YPR010C ECM13P38195 257 aa3.27□□□□□ -1.89
RPA135YPR010C GND1P38720 489 aaKnown RBP3.27□□□□□ -1.89
RPA135YPR010C MUP3P38734 546 aa3.27□□□□□ -1.89
RPA135YPR010C CYC2P38909 366 aa3.27□□□□□ -1.89
RPA135YPR010C AXL2P38928 823 aa3.27□□□□□ -1.89
RPA135YPR010C GDI1P39958 451 aaKnown RBP3.27□□□□□ -1.89
RPA135YPR010C MOB1P40484 314 aa3.27□□□□□ -1.89
RPA135YPR010C SEC28P40509 296 aaKnown RBP3.27□□□□□ -1.89
RPA135YPR010C FKH2P41813 862 aa3.27□□□□□ -1.89
RPA135YPR010C MPS3P47069 682 aa3.27□□□□□ -1.89
RPA135YPR010C YJR030CP47101 745 aa3.27□□□□□ -1.89
RPA135YPR010C PSP1P50896 841 aaKnown RBP3.27□□□□□ -1.89
RPA135YPR010C SHE4P51534 789 aa3.27□□□□□ -1.89
RPA135YPR010C NMA2P53204 395 aa3.27□□□□□ -1.89
RPA135YPR010C SLM2P53955 656 aa3.27□□□□□ -1.89
RPA135YPR010C HSP31Q04432 237 aa3.27□□□□□ -1.89
RPA135YPR010C APC4Q04601 652 aa3.27□□□□□ -1.89
RPA135YPR010C BLS1Q06071 122 aa3.27□□□□□ -1.89
RPA135YPR010C EAF1Q06337 982 aa3.27□□□□□ -1.89
RPA135YPR010C RAD34Q06665 692 aa3.27□□□□□ -1.89
RPA135YPR010C TGL5Q12043 749 aa3.27□□□□□ -1.89
RPA135YPR010C HBN1Q96VH4 193 aa3.27□□□□□ -1.89
RPA135YPR010C MTF1P14908 341 aaKnown RBP3.27□□□□□ -1.89
RPA135YPR010C SHM2P37291 469 aaKnown RBP3.27□□□□□ -1.89
RPA135YPR010C UBS1P38290 277 aa3.27□□□□□ -1.89
RPA135YPR010C SRP72P38688 640 aaKnown RBP3.27□□□□□ -1.89
RPA135YPR010C YHR078WP38799 552 aa3.27□□□□□ -1.89
RPA135YPR010C ATG7P38862 630 aa3.27□□□□□ -1.89
RPA135YPR010C SEO1P39709 593 aa3.27□□□□□ -1.89
RPA135YPR010C COA1P40452 197 aa3.27□□□□□ -1.89
RPA135YPR010C GTS1P40956 396 aa3.27□□□□□ -1.89
RPA135YPR010C PAC11P40960 533 aa3.27□□□□□ -1.89
RPA135YPR010C DUG1P43616 481 aaKnown RBP3.27□□□□□ -1.89
RPA135YPR010C STB2P46679 850 aa3.27□□□□□ -1.89
RPA135YPR010C PYK2P52489 506 aaKnown RBP3.27□□□□□ -1.89
RPA135YPR010C GLO2Q05584 274 aa3.27□□□□□ -1.89
RPA135YPR010C PHO92Q06390 306 aa3.27□□□□□ -1.89
RPA135YPR010C GYP1Q08484 637 aa3.27□□□□□ -1.89
RPA135YPR010C LEU4P06208 619 aaKnown RBP3.27□□□□□ -1.89
RPA135YPR010C POL30P15873 258 aaKnown RBP3.27□□□□□ -1.89
RPA135YPR010C AMD2P22580 549 aa3.27□□□□□ -1.89
RPA135YPR010C MNE1P24720 663 aa3.27□□□□□ -1.89
RPA135YPR010C MRPL32P25348 183 aa3.27□□□□□ -1.89
RPA135YPR010C SPB1P25582 841 aaPredicted RBP3.27□□□□□ -1.89
RPA135YPR010C ZUO1P32527 433 aaKnown RBP3.27□□□□□ -1.89
RPA135YPR010C SSN3P39073 555 aa3.27□□□□□ -1.89
RPA135YPR010C MTW1P39731 289 aa3.27□□□□□ -1.89
RPA135YPR010C VHR1P40522 640 aa3.27□□□□□ -1.89
RPA135YPR010C IME4P41833 600 aa3.27□□□□□ -1.89
RPA135YPR010C YGR266WP53326 701 aa3.27□□□□□ -1.89
RPA135YPR010C RCF2P53721 224 aa3.27□□□□□ -1.89
RPA135YPR010C YNR068CP53754 272 aa3.27□□□□□ -1.89
RPA135YPR010C PRP38Q00723 242 aaPredicted RBP3.27□□□□□ -1.89
RPA135YPR010C FMN1Q03778 218 aa3.27□□□□□ -1.89
RPA135YPR010C AIM32Q04689 311 aa3.27□□□□□ -1.89
RPA135YPR010C DCI1Q08558 271 aa3.27□□□□□ -1.89
RPA135YPR010C YOR238WQ08634 303 aa3.27□□□□□ -1.89
RPA135YPR010C BUD7Q08754 746 aa3.27□□□□□ -1.89
RPA135YPR010C NSL1Q12143 216 aa3.27□□□□□ -1.89
RPA135YPR010C BLM10P43583 2143 aa3.26□□□□□ -1.89
RPA135YPR010C MET17P06106 444 aa3.26□□□□□ -1.89
RPA135YPR010C RPS21AP0C0V8 87 aaKnown RBP3.26□□□□□ -1.89
RPA135YPR010C SED4P25365 1065 aa3.26□□□□□ -1.89
RPA135YPR010C PUP2P32379 260 aa3.26□□□□□ -1.89
RPA135YPR010C MDJ1P35191 511 aa3.26□□□□□ -1.89
RPA135YPR010C TEF4P36008 412 aaKnown RBP3.26□□□□□ -1.89
RPA135YPR010C YBR284WP38150 797 aa3.26□□□□□ -1.89
RPA135YPR010C BMT2P38278 337 aa3.26□□□□□ -1.89
RPA135YPR010C ECM10P39987 644 aa3.26□□□□□ -1.89
RPA135YPR010C PCL7P40186 285 aa3.26□□□□□ -1.89
RPA135YPR010C PFA3P42836 336 aa3.26□□□□□ -1.89
RPA135YPR010C GUS1P46655 708 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
RPA135YPR010C GCV1P48015 400 aa3.26□□□□□ -1.89
RPA135YPR010C MIG2P53035 382 aa3.26□□□□□ -1.89
RPA135YPR010C COG1P53079 417 aa3.26□□□□□ -1.89
RPA135YPR010C IDP3P53982 420 aaKnown RBP3.26□□□□□ -1.89
RPA135YPR010C YPL062WQ02781 134 aa3.26□□□□□ -1.89
RPA135YPR010C GRX8Q05926 109 aa3.26□□□□□ -1.89
RPA135YPR010C ATG17Q06410 417 aa3.26□□□□□ -1.89
RPA135YPR010C MCP2Q06567 569 aa3.26□□□□□ -1.89
RPA135YPR010C GPN2Q08726 347 aaPredicted RBP3.26□□□□□ -1.89
RPA135YPR010C HMG2P12684 1045 aa3.26□□□□□ -1.89
RPA135YPR010C NCP1P16603 691 aaKnown RBP3.26□□□□□ -1.89
RPA135YPR010C CRM1P30822 1084 aaKnown RBP3.26□□□□□ -1.89
RPA135YPR010C WHI3P34761 661 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms