RNA–Protein interactions for RNA: YPL054W

LEE1, Transcript of Zinc-finger protein of unknown function, yeast

Gene LEE1, Length 906 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEE1	YPL054W	YCK1	P23291	538 aa		2.16	□□□□□ -2.06
LEE1	YPL054W	ELO2	P25358	347 aa		2.16	□□□□□ -2.06
LEE1	YPL054W	NUP2	P32499	720 aa		2.16	□□□□□ -2.06
LEE1	YPL054W	LCL3	P53153	274 aa		2.16	□□□□□ -2.06
LEE1	YPL054W	CUE5	Q08412	411 aa	Known RBP	2.16	□□□□□ -2.06
LEE1	YPL054W	SSP2	Q08646	371 aa		2.16	□□□□□ -2.06
LEE1	YPL054W	RAD61	Q99359	647 aa		2.16	□□□□□ -2.06
LEE1	YPL054W	RPL19A	P0CX82	189 aa	Known RBP	2.15	□□□□□ -2.07
LEE1	YPL054W	RPL19B	P0CX83	189 aa	Predicted RBP	2.15	□□□□□ -2.07
LEE1	YPL054W	VID24	P38263	362 aa		2.15	□□□□□ -2.07
LEE1	YPL054W	MST28	P39552	234 aa		2.15	□□□□□ -2.07
LEE1	YPL054W	SYG1	P40528	902 aa		2.15	□□□□□ -2.07
LEE1	YPL054W	GAB1	P41733	394 aa		2.15	□□□□□ -2.07
LEE1	YPL054W	SOV1	Q04748	898 aa		2.15	□□□□□ -2.07
LEE1	YPL054W	NFT1	P0CE68	1218 aa		2.14	□□□□□ -2.07
LEE1	YPL054W	CCT6	P39079	546 aa		2.14	□□□□□ -2.07
LEE1	YPL054W	DPH1	P40487	425 aa	Known RBP	2.14	□□□□□ -2.07
LEE1	YPL054W	LAM5	P43560	674 aa		2.14	□□□□□ -2.07
LEE1	YPL054W	TRS85	P46944	698 aa		2.14	□□□□□ -2.07
LEE1	YPL054W	YJR085C	P47131	105 aa	Known RBP	2.14	□□□□□ -2.07
LEE1	YPL054W	BRO1	P48582	844 aa		2.14	□□□□□ -2.07
LEE1	YPL054W	MTM1	P53320	366 aa		2.14	□□□□□ -2.07
LEE1	YPL054W	VHS1	Q03785	461 aa		2.14	□□□□□ -2.07
LEE1	YPL054W	NOP58	Q12499	511 aa	Known RBP	2.14	□□□□□ -2.07
LEE1	YPL054W	PRB1	P09232	635 aa		2.13	□□□□□ -2.07
LEE1	YPL054W	CHS3	P29465	1165 aa		2.13	□□□□□ -2.07
LEE1	YPL054W	UTP18	P40362	594 aa	Predicted RBP	2.13	□□□□□ -2.07
LEE1	YPL054W	IMD4	P50094	524 aa	Known RBP	2.13	□□□□□ -2.07
LEE1	YPL054W	IGO1	P53897	168 aa		2.13	□□□□□ -2.07
LEE1	YPL054W	HXT11	P54862	567 aa		2.13	□□□□□ -2.07
LEE1	YPL054W	FIN1	Q03898	291 aa		2.13	□□□□□ -2.07
LEE1	YPL054W	PPM1	Q04081	328 aa		2.13	□□□□□ -2.07
LEE1	YPL054W	ECM11	Q04110	302 aa		2.13	□□□□□ -2.07
LEE1	YPL054W	PDS5	Q04264	1277 aa		2.13	□□□□□ -2.07
LEE1	YPL054W	YEH1	Q07804	573 aa		2.13	□□□□□ -2.07
LEE1	YPL054W	IES4	Q08561	116 aa		2.13	□□□□□ -2.07
LEE1	YPL054W	PKH2	Q12236	1081 aa	Known RBP	2.13	□□□□□ -2.07
LEE1	YPL054W	TRP1	P00912	224 aa		2.12	□□□□□ -2.07
LEE1	YPL054W	POP5	P28005	173 aa		2.12	□□□□□ -2.07
LEE1	YPL054W	CHK1	P38147	527 aa		2.12	□□□□□ -2.07
LEE1	YPL054W	MUM2	P38236	366 aa		2.12	□□□□□ -2.07
LEE1	YPL054W	YMR181C	Q03231	154 aa		2.12	□□□□□ -2.07
LEE1	YPL054W	RPC11	Q04307	110 aa	Predicted RBP	2.12	□□□□□ -2.07
LEE1	YPL054W	MFB1	Q04922	465 aa		2.12	□□□□□ -2.07
LEE1	YPL054W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	2.12	□□□□□ -2.07	not detected
LEE1	YPL054W	YPQ1	Q12010	308 aa		2.12	□□□□□ -2.07
LEE1	YPL054W	YBR126W-A	Q8TGU7	68 aa		2.12	□□□□□ -2.07
LEE1	YPL054W	YPT6	Q99260	215 aa		2.12	□□□□□ -2.07
LEE1	YPL054W	BI3	Q9ZZW7	517 aa		2.12	□□□□□ -2.07
LEE1	YPL054W	TIP1	P27654	210 aa	Predicted RBP	2.11	□□□□□ -2.07
LEE1	YPL054W	NPL6	P32832	435 aa		2.11	□□□□□ -2.07
LEE1	YPL054W	TCD2	P36101	447 aa	Known RBP	2.11	□□□□□ -2.07
LEE1	YPL054W	TIM18	Q08749	192 aa		2.11	□□□□□ -2.07
LEE1	YPL054W	HUA2	Q12134	243 aa		2.11	□□□□□ -2.07
LEE1	YPL054W	RLM1	Q12224	676 aa		2.11	□□□□□ -2.07
LEE1	YPL054W	YCR041W	P37265	110 aa		2.1	□□□□□ -2.07
LEE1	YPL054W	ARA1	P38115	344 aa		2.1	□□□□□ -2.07
LEE1	YPL054W	YHR131C	P38835	850 aa		2.1	□□□□□ -2.07
LEE1	YPL054W	OCA1	P50946	238 aa	Predicted RBP	2.1	□□□□□ -2.07
LEE1	YPL054W	SLG1	P54867	378 aa		2.1	□□□□□ -2.07
LEE1	YPL054W	VPS38	Q05919	439 aa		2.1	□□□□□ -2.07
LEE1	YPL054W	MRD1	Q06106	887 aa	Known RBP	2.1	□□□□□ -2.07
LEE1	YPL054W	PEP3	P27801	918 aa		2.09	□□□□□ -2.07
LEE1	YPL054W	MRPS9	P38120	278 aa		2.09	□□□□□ -2.07
LEE1	YPL054W	REG2	P38232	338 aa		2.09	□□□□□ -2.07
LEE1	YPL054W	BMT2	P38278	337 aa		2.09	□□□□□ -2.07
LEE1	YPL054W	AIM10	P39965	576 aa	Known RBP	2.09	□□□□□ -2.07
LEE1	YPL054W	IES5	P40060	125 aa		2.09	□□□□□ -2.07
LEE1	YPL054W	DFG10	P40526	253 aa		2.09	□□□□□ -2.07
LEE1	YPL054W	YIP1	P53039	248 aa		2.09	□□□□□ -2.07
LEE1	YPL054W	NCS2	P53923	493 aa	Predicted RBP	2.09	□□□□□ -2.07
LEE1	YPL054W	YKU80	Q04437	629 aa		2.09	□□□□□ -2.07
LEE1	YPL054W	TOP1	P04786	769 aa		2.08	□□□□□ -2.08
LEE1	YPL054W	PRD1	P25375	712 aa		2.08	□□□□□ -2.08
LEE1	YPL054W	MUD1	P32605	298 aa	Known RBP	2.08	□□□□□ -2.08
LEE1	YPL054W	SEO1	P39709	593 aa		2.08	□□□□□ -2.08
LEE1	YPL054W	CHS6	P40955	746 aa		2.08	□□□□□ -2.08
LEE1	YPL054W	LYS14	P40971	790 aa		2.08	□□□□□ -2.08
LEE1	YPL054W	CAF130	P53280	1122 aa	Predicted RBP	2.08	□□□□□ -2.08
LEE1	YPL054W	AIM32	Q04689	311 aa		2.08	□□□□□ -2.08
LEE1	YPL054W	YPR091C	Q06833	770 aa		2.08	□□□□□ -2.08
LEE1	YPL054W	SNX3	Q08826	162 aa	Known RBP	2.08	□□□□□ -2.08
LEE1	YPL054W	NMD4	Q12129	218 aa		2.08	□□□□□ -2.08
LEE1	YPL054W	YPS3	Q12303	508 aa		2.08	□□□□□ -2.08
LEE1	YPL054W	AVL9	Q12500	764 aa		2.08	□□□□□ -2.08
LEE1	YPL054W	SLY1	P22213	666 aa		2.07	□□□□□ -2.08
LEE1	YPL054W	GYP6	P32806	458 aa		2.07	□□□□□ -2.08
LEE1	YPL054W	FLC2	P39719	783 aa		2.07	□□□□□ -2.08
LEE1	YPL054W	SSU1	P41930	458 aa		2.07	□□□□□ -2.08
LEE1	YPL054W	NGL3	Q03210	505 aa		2.07	□□□□□ -2.08
LEE1	YPL054W	YDR239C	Q03780	787 aa		2.07	□□□□□ -2.08
LEE1	YPL054W	ATG16	Q03818	150 aa		2.07	□□□□□ -2.08
LEE1	YPL054W	YJR112W-A	Q3E743	109 aa		2.07	□□□□□ -2.08
LEE1	YPL054W	PSK1	P31374	1356 aa		2.07	□□□□□ -2.08
LEE1	YPL054W	RPL31B	P0C2H9	113 aa	Known RBP	2.06	□□□□□ -2.08
LEE1	YPL054W	SNT1	P25357	1226 aa		2.06	□□□□□ -2.08
LEE1	YPL054W	KAR9	P32526	644 aa		2.06	□□□□□ -2.08
LEE1	YPL054W	REC114	P32841	428 aa		2.06	□□□□□ -2.08
LEE1	YPL054W	KEL1	P38853	1164 aa	Known RBP	2.06	□□□□□ -2.08
LEE1	YPL054W	YMR147W	P40218	223 aa	Known RBP	2.06	□□□□□ -2.08

Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms