RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C VPS25P47142 202 aa7.22□□□□□ -1.25
RUP1YOR138C ARR1Q06596 294 aa7.22□□□□□ -1.25
RUP1YOR138C MSF1P08425 469 aa7.22□□□□□ -1.25
RUP1YOR138C UNG1P12887 359 aa7.22□□□□□ -1.25
RUP1YOR138C MRPL8P22353 238 aa7.22□□□□□ -1.25
RUP1YOR138C ARO7P32178 256 aa7.22□□□□□ -1.25
RUP1YOR138C SEC17P32602 292 aa7.22□□□□□ -1.25
RUP1YOR138C THI80P35202 319 aa7.22□□□□□ -1.25
RUP1YOR138C MRPL40P36534 297 aa7.22□□□□□ -1.25
RUP1YOR138C MTG2P38860 518 aa7.22□□□□□ -1.25
RUP1YOR138C MET12P46151 657 aa7.22□□□□□ -1.25
RUP1YOR138C HOC1P47124 396 aa7.22□□□□□ -1.25
RUP1YOR138C PRM8P53174 237 aa7.22□□□□□ -1.25
RUP1YOR138C VAC7P53950 1165 aa7.22□□□□□ -1.25
RUP1YOR138C FIN1Q03898 291 aa7.22□□□□□ -1.25
RUP1YOR138C YOL131WQ08270 108 aa7.22□□□□□ -1.25
RUP1YOR138C YPL119C-AQ3E751 87 aa7.22□□□□□ -1.25
RUP1YOR138C CDC4P07834 779 aa7.21□□□□□ -1.26
RUP1YOR138C BIO2P32451 375 aa7.21□□□□□ -1.26
RUP1YOR138C HMT1P38074 348 aa7.21□□□□□ -1.26
RUP1YOR138C GPX2P38143 162 aa7.21□□□□□ -1.26
RUP1YOR138C BMT2P38278 337 aa7.21□□□□□ -1.26
RUP1YOR138C COS111P38308 924 aa7.21□□□□□ -1.26
RUP1YOR138C RCK1P38622 512 aa7.21□□□□□ -1.26
RUP1YOR138C CEM1P39525 442 aa7.21□□□□□ -1.26
RUP1YOR138C AFG3P39925 761 aa7.21□□□□□ -1.26
RUP1YOR138C MIT1P40002 666 aa7.21□□□□□ -1.26
RUP1YOR138C YJR124CP47159 448 aa7.21□□□□□ -1.26
RUP1YOR138C YNL181WP53878 407 aa7.21□□□□□ -1.26
RUP1YOR138C RRN5Q02983 363 aa7.21□□□□□ -1.26
RUP1YOR138C YLR012CQ07927 99 aa7.21□□□□□ -1.26
RUP1YOR138C Q0010Q9ZZX9 128 aa7.21□□□□□ -1.26
RUP1YOR138C PHO4P07270 312 aaKnown RBP7.2□□□□□ -1.26
RUP1YOR138C MAS1P10507 462 aa7.2□□□□□ -1.26
RUP1YOR138C CLN2P20438 545 aa7.2□□□□□ -1.26
RUP1YOR138C GIT1P25346 518 aa7.2□□□□□ -1.26
RUP1YOR138C RER1P25560 188 aa7.2□□□□□ -1.26
RUP1YOR138C ADK2P26364 225 aa7.2□□□□□ -1.26
RUP1YOR138C PRP18P33411 251 aaPredicted RBP7.2□□□□□ -1.26
RUP1YOR138C GCS1P35197 352 aa7.2□□□□□ -1.26
RUP1YOR138C LRG1P35688 1017 aa7.2□□□□□ -1.26
RUP1YOR138C APM3P38153 483 aa7.2□□□□□ -1.26
RUP1YOR138C SLX1P38324 304 aa7.2□□□□□ -1.26
RUP1YOR138C RSP5P39940 809 aaKnown RBP7.2□□□□□ -1.26
RUP1YOR138C YEL023CP39992 682 aa7.2□□□□□ -1.26
RUP1YOR138C IME4P41833 600 aa7.2□□□□□ -1.26
RUP1YOR138C SIP4P46954 829 aa7.2□□□□□ -1.26
RUP1YOR138C BIO3P50277 480 aa7.2□□□□□ -1.26
RUP1YOR138C NQM1P53228 333 aaPredicted RBP7.2□□□□□ -1.26
RUP1YOR138C SPP1Q03012 353 aa7.2□□□□□ -1.26
RUP1YOR138C ABZ2Q03266 374 aa7.2□□□□□ -1.26
RUP1YOR138C BSC2Q05611 235 aa7.2□□□□□ -1.26
RUP1YOR138C YLR345WQ06137 509 aa7.2□□□□□ -1.26
RUP1YOR138C RSC3Q06639 885 aa7.2□□□□□ -1.26
RUP1YOR138C COS7Q07788 383 aa7.2□□□□□ -1.26
RUP1YOR138C IRC10Q08118 586 aa7.2□□□□□ -1.26
RUP1YOR138C MCA1Q08601 432 aa7.2□□□□□ -1.26
RUP1YOR138C BBP1Q12365 385 aa7.2□□□□□ -1.26
RUP1YOR138C PEX11Q12462 236 aa7.2□□□□□ -1.26
RUP1YOR138C SRN2Q99176 213 aa7.2□□□□□ -1.26
RUP1YOR138C SGV1P23293 657 aaKnown RBP7.2□□□□□ -1.26
RUP1YOR138C TSA1P34760 196 aaKnown RBP7.2□□□□□ -1.26
RUP1YOR138C ALY1P36117 915 aa7.2□□□□□ -1.26
RUP1YOR138C YKR051WP36142 418 aa7.2□□□□□ -1.26
RUP1YOR138C YCR087C-AP37263 153 aa7.2□□□□□ -1.26
RUP1YOR138C YER034WP40022 185 aaKnown RBP7.2□□□□□ -1.26
RUP1YOR138C FCY21P40039 528 aa7.2□□□□□ -1.26
RUP1YOR138C EMP65P40085 556 aa7.2□□□□□ -1.26
RUP1YOR138C CAK1P43568 368 aaPredicted RBP7.2□□□□□ -1.26
RUP1YOR138C MRPL13Q02204 264 aa7.2□□□□□ -1.26
RUP1YOR138C SMA1Q02651 245 aa7.2□□□□□ -1.26
RUP1YOR138C YML083CQ04526 418 aa7.2□□□□□ -1.26
RUP1YOR138C YOR387CQ08910 206 aa7.2□□□□□ -1.26
RUP1YOR138C HSP42Q12329 375 aa7.2□□□□□ -1.26
RUP1YOR138C NDJ1Q12366 352 aa7.2□□□□□ -1.26
RUP1YOR138C RPP1BP10622 106 aaKnown RBP7.19□□□□□ -1.26
RUP1YOR138C GAL3P13045 520 aa7.19□□□□□ -1.26
RUP1YOR138C SLX5P32828 619 aaKnown RBP7.19□□□□□ -1.26
RUP1YOR138C MOT2P34909 587 aaKnown RBP7.19□□□□□ -1.26
RUP1YOR138C TSL1P38427 1098 aaKnown RBP7.19□□□□□ -1.26
RUP1YOR138C HSE1P38753 452 aa7.19□□□□□ -1.26
RUP1YOR138C YHR219WP38900 624 aa7.19□□□□□ -1.26
RUP1YOR138C EXO1P39875 702 aa7.19□□□□□ -1.26
RUP1YOR138C MPM1P40364 252 aa7.19□□□□□ -1.26
RUP1YOR138C ALR2P43553 858 aa7.19□□□□□ -1.26
RUP1YOR138C HXT16P47185 567 aa7.19□□□□□ -1.26
RUP1YOR138C SPC105P53148 917 aa7.19□□□□□ -1.26
RUP1YOR138C YNR021WP53723 404 aaKnown RBP7.19□□□□□ -1.26
RUP1YOR138C CPR8P53728 308 aa7.19□□□□□ -1.26
RUP1YOR138C YMD8Q03697 442 aa7.19□□□□□ -1.26
RUP1YOR138C ACF2Q12168 779 aa7.19□□□□□ -1.26
RUP1YOR138C YPL245WQ12179 454 aaKnown RBP7.19□□□□□ -1.26
RUP1YOR138C YCL012CQ8J0M4 134 aa7.19□□□□□ -1.26
RUP1YOR138C GPM1P00950 247 aaKnown RBP7.18□□□□□ -1.26
RUP1YOR138C DBF2P22204 572 aa7.18□□□□□ -1.26
RUP1YOR138C PTC6P25646 442 aa7.18□□□□□ -1.26
RUP1YOR138C TIP20P33891 701 aa7.18□□□□□ -1.26
RUP1YOR138C PET112P33893 541 aa7.18□□□□□ -1.26
RUP1YOR138C HCS1P34243 683 aa7.18□□□□□ -1.26
RUP1YOR138C MAP2P38174 421 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms