RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	ARP9	Q05123	467 aa		3.6	□□□□□ -1.83
TPM1	YNL079C	DON1	Q05610	365 aa		3.6	□□□□□ -1.83
TPM1	YNL079C	ECI1	Q05871	280 aa		3.6	□□□□□ -1.83
TPM1	YNL079C	ADE13	Q05911	482 aa	Known RBP	3.6	□□□□□ -1.83
TPM1	YNL079C	ATG26	Q06321	1198 aa		3.6	□□□□□ -1.83
TPM1	YNL079C	TSR1	Q07381	788 aa	Known RBP	3.6	□□□□□ -1.83
TPM1	YNL079C	MLH2	Q07980	695 aa		3.6	□□□□□ -1.83
TPM1	YNL079C	SIL1	Q08199	421 aa		3.6	□□□□□ -1.83
TPM1	YNL079C	LEU9	Q12166	604 aa	Known RBP	3.6	□□□□□ -1.83
TPM1	YNL079C	SEC53	P07283	254 aa	Known RBP	3.59	□□□□□ -1.83
TPM1	YNL079C	ARD1	P07347	238 aa	Predicted RBP	3.59	□□□□□ -1.83
TPM1	YNL079C	RPB8	P20436	146 aa		3.59	□□□□□ -1.83
TPM1	YNL079C	PAP1	P29468	568 aa	Known RBP	3.59	□□□□□ -1.83
TPM1	YNL079C	COT1	P32798	439 aa		3.59	□□□□□ -1.83
TPM1	YNL079C	TVP38	P36164	337 aa		3.59	□□□□□ -1.83
TPM1	YNL079C	NOP4	P37838	685 aa	Known RBP	3.59	□□□□□ -1.83
TPM1	YNL079C	REG2	P38232	338 aa		3.59	□□□□□ -1.83
TPM1	YNL079C	FLC2	P39719	783 aa		3.59	□□□□□ -1.83
TPM1	YNL079C	HMF1	P40037	129 aa	Known RBP	3.59	□□□□□ -1.83
TPM1	YNL079C	VRG4	P40107	337 aa		3.59	□□□□□ -1.83
TPM1	YNL079C	KAP114	P53067	1004 aa		3.59	□□□□□ -1.83
TPM1	YNL079C	CWC22	P53333	577 aa	Known RBP	3.59	□□□□□ -1.83
TPM1	YNL079C	EFM6	P53970	246 aa		3.59	□□□□□ -1.83
TPM1	YNL079C	MPS1	P54199	764 aa		3.59	□□□□□ -1.83
TPM1	YNL079C	EMI2	Q04409	500 aa	Known RBP	3.59	□□□□□ -1.83
TPM1	YNL079C	YMR114C	Q04471	368 aa	Known RBP	3.59	□□□□□ -1.83
TPM1	YNL079C	SMC5	Q08204	1093 aa		3.59	□□□□□ -1.83
TPM1	YNL079C	CFT2	Q12102	859 aa	Predicted RBP	3.59	□□□□□ -1.83
TPM1	YNL079C	ERP3	Q12403	225 aa		3.59	□□□□□ -1.83
TPM1	YNL079C	YKL068W-A	Q3E826	78 aa		3.59	□□□□□ -1.83
TPM1	YNL079C	YFL068W	P0CX99	160 aa		3.58	□□□□□ -1.84
TPM1	YNL079C	YLL066W-A	P0CY00	160 aa		3.58	□□□□□ -1.84
TPM1	YNL079C	YLL067W-A	P0CY01	160 aa		3.58	□□□□□ -1.84
TPM1	YNL079C	KGD1	P20967	1014 aa	Known RBP	3.58	□□□□□ -1.84
TPM1	YNL079C	OLE1	P21147	510 aa	Known RBP	3.58	□□□□□ -1.84
TPM1	YNL079C	YIH1	P25637	258 aa		3.58	□□□□□ -1.84
TPM1	YNL079C	MUD1	P32605	298 aa	Known RBP	3.58	□□□□□ -1.84
TPM1	YNL079C	NFU1	P32860	256 aa		3.58	□□□□□ -1.84
TPM1	YNL079C	ATO2	P32907	282 aa		3.58	□□□□□ -1.84
TPM1	YNL079C	YIL152W	P40455	235 aa		3.58	□□□□□ -1.84
TPM1	YNL079C	LCL3	P53153	274 aa		3.58	□□□□□ -1.84
TPM1	YNL079C	RTT102	P53330	157 aa		3.58	□□□□□ -1.84
TPM1	YNL079C	DIG1	Q03063	452 aa	Known RBP	3.58	□□□□□ -1.84
TPM1	YNL079C	CTL1	Q03220	320 aa	Known RBP	3.58	□□□□□ -1.84
TPM1	YNL079C	SLD5	Q03406	294 aa		3.58	□□□□□ -1.84
TPM1	YNL079C	VTI1	Q04338	217 aa		3.58	□□□□□ -1.84
TPM1	YNL079C	BUD22	Q04347	519 aa	Known RBP	3.58	□□□□□ -1.84
TPM1	YNL079C	COQ9	Q05779	260 aa		3.58	□□□□□ -1.84
TPM1	YNL079C	NOP6	Q07623	225 aa	Known RBP	3.58	□□□□□ -1.84
TPM1	YNL079C	GRC3	Q07845	632 aa		3.58	□□□□□ -1.84
TPM1	YNL079C	CIR2	Q08822	631 aa		3.58	□□□□□ -1.84
TPM1	YNL079C	CDC8	P00572	216 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	PUP3	P25451	205 aa	Known RBP	3.57	□□□□□ -1.84
TPM1	YNL079C	SGF29	P25554	259 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	SYN8	P31377	255 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	GCG1	P32656	232 aa	Known RBP	3.57	□□□□□ -1.84
TPM1	YNL079C	BLI1	P35727	113 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	DBP7	P36120	742 aa	Known RBP	3.57	□□□□□ -1.84
TPM1	YNL079C	YPK3	P38070	525 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	RCK2	P38623	610 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	DBP8	P38719	431 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	UBA4	P38820	440 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	CCT6	P39079	546 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	PHO90	P39535	881 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	YIL089W	P40500	205 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	SNM1	P40993	198 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	MIC19	P43594	170 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	RPS10B	P46784	105 aa	Known RBP	3.57	□□□□□ -1.84
TPM1	YNL079C	ERG26	P53199	349 aa	Known RBP	3.57	□□□□□ -1.84
TPM1	YNL079C	YNL234W	P53857	426 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	YNL181W	P53878	407 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	VPS72	Q03388	795 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	EKI1	Q03764	534 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	URH1	Q04179	340 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	DPB4	Q04603	196 aa	Known RBP	3.57	□□□□□ -1.84
TPM1	YNL079C	YMR321C	Q04898	105 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	LUC7	Q07508	261 aa	Predicted RBP	3.57	□□□□□ -1.84
TPM1	YNL079C	SNA4	Q07549	140 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	YDL218W	Q07629	317 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	YEH1	Q07804	573 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	TEN1	Q07921	160 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	IES4	Q08561	116 aa		3.57	□□□□□ -1.84
TPM1	YNL079C	RPS10A	Q08745	105 aa	Predicted RBP	3.57	□□□□□ -1.84
TPM1	YNL079C	MF(ALPHA)1	P01149	165 aa		3.56	□□□□□ -1.84
TPM1	YNL079C	ARG81	P05085	880 aa		3.56	□□□□□ -1.84
TPM1	YNL079C	CDC33	P07260	213 aa	Known RBP	3.56	□□□□□ -1.84
TPM1	YNL079C	PUT2	P07275	575 aa		3.56	□□□□□ -1.84
TPM1	YNL079C	HSC82	P15108	705 aa	Known RBP	3.56	□□□□□ -1.84
TPM1	YNL079C	MET8	P15807	274 aa		3.56	□□□□□ -1.84
TPM1	YNL079C	RME1	P32338	300 aa	Known RBP	3.56	□□□□□ -1.84
TPM1	YNL079C	SSE2	P32590	693 aa	Known RBP	3.56	□□□□□ -1.84
TPM1	YNL079C	PDR3	P33200	976 aa		3.56	□□□□□ -1.84
TPM1	YNL079C	OLA1	P38219	394 aa	Known RBP	3.56	□□□□□ -1.84
TPM1	YNL079C	RGI2	P40188	164 aa		3.56	□□□□□ -1.84
TPM1	YNL079C	YTA12	P40341	825 aa		3.56	□□□□□ -1.84
TPM1	YNL079C	FAR3	P46671	204 aa		3.56	□□□□□ -1.84
TPM1	YNL079C	CTK3	P46963	296 aa	Predicted RBP	3.56	□□□□□ -1.84
TPM1	YNL079C	RPC17	P47076	161 aa		3.56	□□□□□ -1.84
TPM1	YNL079C	MRX6	P48564	524 aa		3.56	□□□□□ -1.84
TPM1	YNL079C	HSH155	P49955	971 aa	Known RBP	3.56	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms