RNA–Protein interactions for RNA: YMR145C

NDE1, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE1YMR145C MRPS35P53292 345 aa7.25□□□□□ -1.25
NDE1YMR145C NOP13P53883 403 aaKnown RBP RIP-Chip data7.25□□□□□ -1.25not detected
NDE1YMR145C PRM15Q03262 622 aa7.25□□□□□ -1.25
NDE1YMR145C PFA5Q03289 374 aa7.25□□□□□ -1.25
NDE1YMR145C YMR265CQ03508 461 aaKnown RBP7.25□□□□□ -1.25
NDE1YMR145C ASA1Q06822 443 aa7.25□□□□□ -1.25
NDE1YMR145C YOR238WQ08634 303 aa7.25□□□□□ -1.25
NDE1YMR145C MED1Q12321 566 aa7.25□□□□□ -1.25
NDE1YMR145C Q0144Q9ZZW2 109 aa7.25□□□□□ -1.25
NDE1YMR145C YLR358CO13565 187 aa7.25□□□□□ -1.25
NDE1YMR145C ATP2P00830 511 aaKnown RBP7.25□□□□□ -1.25
NDE1YMR145C RPS18AP0CX55 146 aaKnown RBP7.25□□□□□ -1.25
NDE1YMR145C RPS18BP0CX56 146 aaPredicted RBP7.25□□□□□ -1.25
NDE1YMR145C YPK1P12688 680 aaKnown RBP7.25□□□□□ -1.25
NDE1YMR145C SNF4P12904 322 aa7.25□□□□□ -1.25
NDE1YMR145C CAF20P12962 161 aaKnown RBP7.25□□□□□ -1.25
NDE1YMR145C UGA1P17649 471 aa7.25□□□□□ -1.25
NDE1YMR145C CHA1P25379 360 aaKnown RBP7.25□□□□□ -1.25
NDE1YMR145C GID7P25569 745 aa7.25□□□□□ -1.25
NDE1YMR145C CDC50P25656 391 aa7.25□□□□□ -1.25
NDE1YMR145C LAC1P28496 418 aa7.25□□□□□ -1.25
NDE1YMR145C SPO23P33757 523 aa7.25□□□□□ -1.25
NDE1YMR145C BET3P36149 193 aa7.25□□□□□ -1.25
NDE1YMR145C MAP2P38174 421 aaKnown RBP7.25□□□□□ -1.25
NDE1YMR145C SOP4P39543 234 aaPredicted RBP7.25□□□□□ -1.25
NDE1YMR145C KRE29P40026 464 aa7.25□□□□□ -1.25
NDE1YMR145C YIL161WP40449 235 aaKnown RBP7.25□□□□□ -1.25
NDE1YMR145C RTT101P47050 842 aa7.25□□□□□ -1.25
NDE1YMR145C GET1P53192 235 aa7.25□□□□□ -1.25
NDE1YMR145C SHY1P53266 389 aa7.25□□□□□ -1.25
NDE1YMR145C TNA1P53322 534 aa7.25□□□□□ -1.25
NDE1YMR145C SOK2P53438 785 aaPredicted RBP7.25□□□□□ -1.25
NDE1YMR145C NOG2P53742 486 aaKnown RBP7.25□□□□□ -1.25
NDE1YMR145C YNR061CP53747 219 aa7.25□□□□□ -1.25
NDE1YMR145C ARK1P53974 638 aa7.25□□□□□ -1.25
NDE1YMR145C YNL010WP53981 241 aaKnown RBP7.25□□□□□ -1.25
NDE1YMR145C SHR3Q02774 210 aa7.25□□□□□ -1.25
NDE1YMR145C PRP42Q03776 544 aaKnown RBP7.25□□□□□ -1.25
NDE1YMR145C APC4Q04601 652 aa7.25□□□□□ -1.25
NDE1YMR145C DFG5Q05031 458 aa7.25□□□□□ -1.25
NDE1YMR145C RRP40Q08285 240 aaKnown RBP7.25□□□□□ -1.25
NDE1YMR145C RRP42Q12277 265 aaPredicted RBP7.25□□□□□ -1.25
NDE1YMR145C PGA3Q12746 312 aaKnown RBP7.25□□□□□ -1.25
NDE1YMR145C YBR085C-AO43137 85 aa7.24□□□□□ -1.25
NDE1YMR145C PHR1P05066 565 aaKnown RBP RIP-Chip data7.24□□□□□ -1.25not detected
NDE1YMR145C HIS5P07172 385 aa7.24□□□□□ -1.25
NDE1YMR145C PHO4P07270 312 aaKnown RBP7.24□□□□□ -1.25
NDE1YMR145C TCP1P12612 559 aaKnown RBP7.24□□□□□ -1.25
NDE1YMR145C MTF1P14908 341 aaKnown RBP7.24□□□□□ -1.25
NDE1YMR145C RAD14P28519 371 aa7.24□□□□□ -1.25
NDE1YMR145C ATP7P30902 174 aa7.24□□□□□ -1.25
NDE1YMR145C MRPL15P36523 253 aa7.24□□□□□ -1.25
NDE1YMR145C YBR056WP38081 501 aa7.24□□□□□ -1.25
NDE1YMR145C ECM13P38195 257 aa7.24□□□□□ -1.25
NDE1YMR145C SHG1P38337 142 aa7.24□□□□□ -1.25
NDE1YMR145C STT3P39007 718 aaKnown RBP7.24□□□□□ -1.25
NDE1YMR145C FHL1P39521 936 aa7.24□□□□□ -1.25
NDE1YMR145C ACO2P39533 789 aa7.24□□□□□ -1.25
NDE1YMR145C PRK1P40494 810 aa7.24□□□□□ -1.25
NDE1YMR145C HOC1P47124 396 aa7.24□□□□□ -1.25
NDE1YMR145C COS12P53053 380 aa7.24□□□□□ -1.25
NDE1YMR145C YGL204CP53089 101 aa7.24□□□□□ -1.25
NDE1YMR145C SSU72P53538 206 aaPredicted RBP7.24□□□□□ -1.25
NDE1YMR145C HCH1P53834 153 aa7.24□□□□□ -1.25
NDE1YMR145C DIG1Q03063 452 aaKnown RBP7.24□□□□□ -1.25
NDE1YMR145C OPT2Q06593 877 aa7.24□□□□□ -1.25
NDE1YMR145C KEL3Q08979 651 aaPredicted RBP7.24□□□□□ -1.25
NDE1YMR145C YOR283WQ12040 230 aaKnown RBP7.24□□□□□ -1.25
NDE1YMR145C ATX2Q12067 313 aa7.24□□□□□ -1.25
NDE1YMR145C PCD1Q12524 340 aa7.24□□□□□ -1.25
NDE1YMR145C PEP5P12868 1029 aa7.23□□□□□ -1.25
NDE1YMR145C KTR1P27810 393 aaKnown RBP7.23□□□□□ -1.25
NDE1YMR145C ECM2P38241 364 aaKnown RBP7.23□□□□□ -1.25
NDE1YMR145C EGD2P38879 174 aaKnown RBP7.23□□□□□ -1.25
NDE1YMR145C UIP3P39547 235 aa7.23□□□□□ -1.25
NDE1YMR145C PAC1P39946 494 aaKnown RBP7.23□□□□□ -1.25
NDE1YMR145C LCP5P40079 357 aaPredicted RBP7.23□□□□□ -1.25
NDE1YMR145C SLS1P42900 643 aa7.23□□□□□ -1.25
NDE1YMR145C SNG1P46950 547 aa7.23□□□□□ -1.25
NDE1YMR145C CPR7P47103 393 aa7.23□□□□□ -1.25
NDE1YMR145C YJR111CP47148 283 aaKnown RBP7.23□□□□□ -1.25
NDE1YMR145C YJR154WP47181 346 aa7.23□□□□□ -1.25
NDE1YMR145C MRX6P48564 524 aa7.23□□□□□ -1.25
NDE1YMR145C RPS12P48589 143 aaKnown RBP7.23□□□□□ -1.25
NDE1YMR145C MRK1P50873 501 aa7.23□□□□□ -1.25
NDE1YMR145C LCL3P53153 274 aa7.23□□□□□ -1.25
NDE1YMR145C MET14Q02196 202 aa7.23□□□□□ -1.25
NDE1YMR145C AIM36Q03798 255 aa7.23□□□□□ -1.25
NDE1YMR145C YLR283WQ05867 314 aa7.23□□□□□ -1.25
NDE1YMR145C UTP21Q06078 939 aaPredicted RBP7.23□□□□□ -1.25
NDE1YMR145C YPR127WQ06494 345 aa7.23□□□□□ -1.25
NDE1YMR145C RRT8Q08219 342 aa7.23□□□□□ -1.25
NDE1YMR145C TRE2Q08693 809 aa7.23□□□□□ -1.25
NDE1YMR145C VAM3Q12241 283 aa7.23□□□□□ -1.25
NDE1YMR145C AGC1Q12482 902 aa7.23□□□□□ -1.25
NDE1YMR145C MTR10Q99189 972 aa7.23□□□□□ -1.25
NDE1YMR145C NUP192P47054 1683 aa7.23□□□□□ -1.25
NDE1YMR145C AI2P03876 854 aa7.22□□□□□ -1.25
NDE1YMR145C TPK2P06245 380 aa7.22□□□□□ -1.25
NDE1YMR145C ERG11P10614 530 aa7.22□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms