RNA–Protein interactions for RNA: YLR353W

BUD8, Transcript of Protein involved in bud-site selection, yeast

Gene BUD8, Length 1,812 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD8	YLR353W	YEL020C	P39994	560 aa		4.59	□□□□□ -1.67
BUD8	YLR353W	SEC9	P40357	651 aa		4.59	□□□□□ -1.67
BUD8	YLR353W	AIP1	P46680	615 aa	Known RBP	4.59	□□□□□ -1.67
BUD8	YLR353W	SAE2	P46946	345 aa		4.59	□□□□□ -1.67
BUD8	YLR353W	YPR003C	P53394	754 aa		4.59	□□□□□ -1.67
BUD8	YLR353W	RET3	P53600	189 aa		4.59	□□□□□ -1.67
BUD8	YLR353W	BOP3	P53958	396 aa		4.59	□□□□□ -1.67
BUD8	YLR353W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
BUD8	YLR353W	CLB1	P24868	471 aa		4.58	□□□□□ -1.68
BUD8	YLR353W	SRB4	P32569	687 aa		4.58	□□□□□ -1.68
BUD8	YLR353W	CSE1	P33307	960 aa		4.58	□□□□□ -1.68
BUD8	YLR353W	PES4	P39684	611 aa		4.58	□□□□□ -1.68
BUD8	YLR353W	YJL068C	P40363	299 aa		4.58	□□□□□ -1.68
BUD8	YLR353W	EFM4	P40516	257 aa		4.58	□□□□□ -1.68
BUD8	YLR353W	RRB1	Q04225	511 aa	Known RBP	4.58	□□□□□ -1.68
BUD8	YLR353W	TLG2	Q08144	397 aa		4.58	□□□□□ -1.68
BUD8	YLR353W	ATG29	Q12092	213 aa		4.58	□□□□□ -1.68
BUD8	YLR353W	YRA1	Q12159	226 aa	Known RBP	4.58	□□□□□ -1.68
BUD8	YLR353W	AQY1	P0CD91	305 aa		4.58	□□□□□ -1.68
BUD8	YLR353W	EST1	P17214	699 aa	Predicted RBP	4.58	□□□□□ -1.68
BUD8	YLR353W	CLB3	P24870	427 aa		4.58	□□□□□ -1.68
BUD8	YLR353W	SWI3	P32591	825 aa		4.58	□□□□□ -1.68
BUD8	YLR353W	SEF1	P34228	1148 aa		4.58	□□□□□ -1.68
BUD8	YLR353W	LRP1	P38801	184 aa	Known RBP	4.58	□□□□□ -1.68
BUD8	YLR353W	VPS41	P38959	992 aa		4.58	□□□□□ -1.68
BUD8	YLR353W	SHQ1	P40486	507 aa	Predicted RBP	4.58	□□□□□ -1.68
BUD8	YLR353W	FAR3	P46671	204 aa		4.58	□□□□□ -1.68
BUD8	YLR353W	YJL043W	P47053	257 aa		4.58	□□□□□ -1.68
BUD8	YLR353W	FIN1	Q03898	291 aa		4.58	□□□□□ -1.68
BUD8	YLR353W	PLP2	Q12017	286 aa		4.58	□□□□□ -1.68
BUD8	YLR353W	GAL80	P04387	435 aa		4.57	□□□□□ -1.68
BUD8	YLR353W	ADE5,7	P07244	802 aa	Known RBP	4.57	□□□□□ -1.68
BUD8	YLR353W	MRP2	P10663	115 aa	Predicted RBP	4.57	□□□□□ -1.68
BUD8	YLR353W	CKI1	P20485	582 aa		4.57	□□□□□ -1.68
BUD8	YLR353W	MAK32	P23060	363 aa		4.57	□□□□□ -1.68
BUD8	YLR353W	PSO2	P30620	661 aa		4.57	□□□□□ -1.68
BUD8	YLR353W	PRO3	P32263	286 aa	Known RBP	4.57	□□□□□ -1.68
BUD8	YLR353W	MRE11	P32829	692 aa		4.57	□□□□□ -1.68
BUD8	YLR353W	TIF3	P34167	436 aa	Known RBP	4.57	□□□□□ -1.68
BUD8	YLR353W	SAS3	P34218	831 aa		4.57	□□□□□ -1.68
BUD8	YLR353W	ELO1	P39540	310 aa		4.57	□□□□□ -1.68
BUD8	YLR353W	LTP1	P40347	161 aa		4.57	□□□□□ -1.68
BUD8	YLR353W	CDC1	P40986	491 aa		4.57	□□□□□ -1.68
BUD8	YLR353W	PET130	P47065	347 aa		4.57	□□□□□ -1.68
BUD8	YLR353W	TWF1	P53250	332 aa		4.57	□□□□□ -1.68
BUD8	YLR353W	NNF2	P53253	936 aa		4.57	□□□□□ -1.68
BUD8	YLR353W	RCF1	Q03713	159 aa		4.57	□□□□□ -1.68
BUD8	YLR353W	RQC1	Q05468	723 aa	Known RBP	4.57	□□□□□ -1.68
BUD8	YLR353W	ARO10	Q06408	635 aa		4.57	□□□□□ -1.68
BUD8	YLR353W	YAP7	Q08182	245 aa		4.57	□□□□□ -1.68
BUD8	YLR353W	SLK19	Q08581	821 aa	Known RBP	4.57	□□□□□ -1.68
BUD8	YLR353W	LEU9	Q12166	604 aa	Known RBP	4.57	□□□□□ -1.68
BUD8	YLR353W	BI2	P03873	423 aa		4.56	□□□□□ -1.68
BUD8	YLR353W	OM45	P16547	393 aa		4.56	□□□□□ -1.68
BUD8	YLR353W	SPO12	P17123	173 aa		4.56	□□□□□ -1.68
BUD8	YLR353W	CKA2	P19454	339 aa		4.56	□□□□□ -1.68
BUD8	YLR353W	KGD1	P20967	1014 aa	Known RBP	4.56	□□□□□ -1.68
BUD8	YLR353W	YBR144C	P34215	104 aa		4.56	□□□□□ -1.68
BUD8	YLR353W	FTH1	P38310	465 aa		4.56	□□□□□ -1.68
BUD8	YLR353W	SMC2	P38989	1170 aa	Known RBP	4.56	□□□□□ -1.68
BUD8	YLR353W	PAC2	P39937	518 aa		4.56	□□□□□ -1.68
BUD8	YLR353W	ALG5	P40350	334 aa		4.56	□□□□□ -1.68
BUD8	YLR353W	YIL166C	P40445	542 aa		4.56	□□□□□ -1.68
BUD8	YLR353W	IMD4	P50094	524 aa	Known RBP	4.56	□□□□□ -1.68
BUD8	YLR353W	YGR127W	P53275	312 aa		4.56	□□□□□ -1.68
BUD8	YLR353W	YDR239C	Q03780	787 aa		4.56	□□□□□ -1.68
BUD8	YLR353W	RPC11	Q04307	110 aa	Predicted RBP	4.56	□□□□□ -1.68
BUD8	YLR353W	YLR345W	Q06137	509 aa		4.56	□□□□□ -1.68
BUD8	YLR353W	DSE3	Q08729	430 aa		4.56	□□□□□ -1.68
BUD8	YLR353W	RLM1	Q12224	676 aa		4.56	□□□□□ -1.68
BUD8	YLR353W	ISA2	Q12425	185 aa		4.56	□□□□□ -1.68
BUD8	YLR353W	CDC8	P00572	216 aa		4.56	□□□□□ -1.68
BUD8	YLR353W	RPL4A	P10664	362 aa	Known RBP	4.56	□□□□□ -1.68
BUD8	YLR353W	PDA1	P16387	420 aa	Known RBP	4.56	□□□□□ -1.68
BUD8	YLR353W	SEC66	P33754	206 aa		4.56	□□□□□ -1.68
BUD8	YLR353W	CMC1	P36064	111 aa		4.56	□□□□□ -1.68
BUD8	YLR353W	OTU2	P38747	307 aa	Known RBP	4.56	□□□□□ -1.68
BUD8	YLR353W	RPL4B	P49626	362 aa	Known RBP	4.56	□□□□□ -1.68
BUD8	YLR353W	VTC3	Q02725	835 aa		4.56	□□□□□ -1.68
BUD8	YLR353W	DPB4	Q04603	196 aa	Known RBP	4.56	□□□□□ -1.68
BUD8	YLR353W	CSM3	Q04659	317 aa		4.56	□□□□□ -1.68
BUD8	YLR353W	NOP6	Q07623	225 aa	Known RBP	4.56	□□□□□ -1.68
BUD8	YLR353W	YOL159C	Q08300	171 aa		4.56	□□□□□ -1.68
BUD8	YLR353W	RUD3	Q12234	484 aa	Known RBP	4.56	□□□□□ -1.68
BUD8	YLR353W	RDL1	Q12305	139 aa	Known RBP	4.56	□□□□□ -1.68
BUD8	YLR353W	CHO1	P08456	276 aa		4.55	□□□□□ -1.68
BUD8	YLR353W	ILS1	P09436	1072 aa	Known RBP	4.55	□□□□□ -1.68
BUD8	YLR353W	RAD57	P25301	460 aa		4.55	□□□□□ -1.68
BUD8	YLR353W	IMG1	P25626	169 aa		4.55	□□□□□ -1.68
BUD8	YLR353W	HXT1	P32465	570 aa		4.55	□□□□□ -1.68
BUD8	YLR353W	ERV46	P39727	415 aa		4.55	□□□□□ -1.68
BUD8	YLR353W	CTK3	P46963	296 aa	Predicted RBP	4.55	□□□□□ -1.68
BUD8	YLR353W	HOS2	P53096	452 aa	Predicted RBP	4.55	□□□□□ -1.68
BUD8	YLR353W	BNI5	P53890	448 aa	Known RBP	4.55	□□□□□ -1.68
BUD8	YLR353W	IMP4	P53941	290 aa	Known RBP	4.55	□□□□□ -1.68
BUD8	YLR353W	APM1	Q00776	475 aa	Predicted RBP	4.55	□□□□□ -1.68
BUD8	YLR353W	MEH1	Q02205	184 aa		4.55	□□□□□ -1.68
BUD8	YLR353W	SMD2	Q06217	110 aa	Known RBP	4.55	□□□□□ -1.68
BUD8	YLR353W	DAS2	Q12084	232 aa		4.55	□□□□□ -1.68
BUD8	YLR353W	SEC39	Q12745	709 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms