RNA–Protein interactions for RNA: YKR037C

SPC34, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeast

Gene SPC34, Length 888 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC34	YKR037C	ETT1	Q08421	412 aa	Known RBP	5.02	□□□□□ -1.61
SPC34	YKR037C	PFA4	Q12006	378 aa		5.02	□□□□□ -1.61
SPC34	YKR037C	TUB1	P09733	447 aa	Known RBP	5.01	□□□□□ -1.61
SPC34	YKR037C	NUP1	P20676	1076 aa		5.01	□□□□□ -1.61
SPC34	YKR037C	CLB1	P24868	471 aa		5.01	□□□□□ -1.61
SPC34	YKR037C	CLB2	P24869	491 aa		5.01	□□□□□ -1.61
SPC34	YKR037C	BUD5	P25300	642 aa	Predicted RBP	5.01	□□□□□ -1.61
SPC34	YKR037C	SEC66	P33754	206 aa		5.01	□□□□□ -1.61
SPC34	YKR037C	CIN4	P39110	191 aa		5.01	□□□□□ -1.61
SPC34	YKR037C	ZIM17	P42844	174 aa		5.01	□□□□□ -1.61
SPC34	YKR037C	DLD2	P46681	530 aa	Known RBP	5.01	□□□□□ -1.61
SPC34	YKR037C	RPS10B	P46784	105 aa	Known RBP	5.01	□□□□□ -1.61
SPC34	YKR037C	UBP8	P50102	471 aa		5.01	□□□□□ -1.61
SPC34	YKR037C	CIK1	Q01649	594 aa		5.01	□□□□□ -1.61
SPC34	YKR037C	MSC1	Q03104	513 aa		5.01	□□□□□ -1.61
SPC34	YKR037C	ARX1	Q03862	593 aa	Known RBP	5.01	□□□□□ -1.61
SPC34	YKR037C	ROY1	Q04847	553 aa		5.01	□□□□□ -1.61
SPC34	YKR037C	COQ9	Q05779	260 aa		5.01	□□□□□ -1.61
SPC34	YKR037C	VTA1	Q06263	330 aa		5.01	□□□□□ -1.61
SPC34	YKR037C	ATG26	Q06321	1198 aa		5.01	□□□□□ -1.61
SPC34	YKR037C	YDL007C-A	Q2V2Q0	85 aa		5.01	□□□□□ -1.61
SPC34	YKR037C	AFI1	Q99222	893 aa		5.01	□□□□□ -1.61
SPC34	YKR037C	HFA1	P32874	2273 aa		5	□□□□□ -1.61
SPC34	YKR037C	HSP82	P02829	709 aa	Known RBP	5	□□□□□ -1.61
SPC34	YKR037C	PTP1	P25044	335 aa		5	□□□□□ -1.61
SPC34	YKR037C	ILV6	P25605	309 aa	Known RBP	5	□□□□□ -1.61
SPC34	YKR037C	GAC1	P28006	793 aa		5	□□□□□ -1.61
SPC34	YKR037C	MIA40	P36046	403 aa		5	□□□□□ -1.61
SPC34	YKR037C	JEM1	P40358	645 aa		5	□□□□□ -1.61
SPC34	YKR037C	LYS20	P48570	428 aa	Known RBP	5	□□□□□ -1.61
SPC34	YKR037C	ALT2	P52892	507 aa		5	□□□□□ -1.61
SPC34	YKR037C	RBS1	Q05672	457 aa	Known RBP	5	□□□□□ -1.61
SPC34	YKR037C	ADE13	Q05911	482 aa	Known RBP	5	□□□□□ -1.61
SPC34	YKR037C	ERG11	P10614	530 aa		4.99	□□□□□ -1.61
SPC34	YKR037C	PPH22	P23595	377 aa		4.99	□□□□□ -1.61
SPC34	YKR037C	ELO2	P25358	347 aa		4.99	□□□□□ -1.61
SPC34	YKR037C	URA7	P28274	579 aa	Known RBP	4.99	□□□□□ -1.61
SPC34	YKR037C	HXT3	P32466	567 aa	Known RBP	4.99	□□□□□ -1.61
SPC34	YKR037C	MTR2	P34232	184 aa	Known RBP	4.99	□□□□□ -1.61
SPC34	YKR037C	HCS1	P34243	683 aa		4.99	□□□□□ -1.61
SPC34	YKR037C	PTI1	P39927	425 aa	Predicted RBP	4.99	□□□□□ -1.61
SPC34	YKR037C	CSM2	P40465	213 aa		4.99	□□□□□ -1.61
SPC34	YKR037C	YGR126W	P53274	230 aa		4.99	□□□□□ -1.61
SPC34	YKR037C	TOF2	Q02208	771 aa		4.99	□□□□□ -1.61
SPC34	YKR037C	SWF1	Q04629	336 aa		4.99	□□□□□ -1.61
SPC34	YKR037C	ORM2	Q06144	216 aa		4.99	□□□□□ -1.61
SPC34	YKR037C	YDL057W	Q07379	328 aa		4.99	□□□□□ -1.61
SPC34	YKR037C	FMP45	Q07651	309 aa		4.99	□□□□□ -1.61
SPC34	YKR037C	OSW1	Q08692	278 aa		4.99	□□□□□ -1.61
SPC34	YKR037C	FRE7	Q12333	620 aa		4.99	□□□□□ -1.61
SPC34	YKR037C	PDH1	Q12428	516 aa	Known RBP	4.99	□□□□□ -1.61
SPC34	YKR037C	PUT2	P07275	575 aa		4.98	□□□□□ -1.61
SPC34	YKR037C	RPL43A	P0CX25	92 aa	Known RBP	4.98	□□□□□ -1.61
SPC34	YKR037C	RPL43B	P0CX26	92 aa		4.98	□□□□□ -1.61
SPC34	YKR037C	CLC1	P17891	233 aa		4.98	□□□□□ -1.61
SPC34	YKR037C	MNE1	P24720	663 aa		4.98	□□□□□ -1.61
SPC34	YKR037C	PEX34	P25584	144 aa		4.98	□□□□□ -1.61
SPC34	YKR037C	BUD14	P27637	709 aa		4.98	□□□□□ -1.61
SPC34	YKR037C	ERV1	P27882	189 aa		4.98	□□□□□ -1.61
SPC34	YKR037C	TFB1	P32776	642 aa		4.98	□□□□□ -1.61
SPC34	YKR037C	UTH1	P36135	365 aa		4.98	□□□□□ -1.61
SPC34	YKR037C	FLO10	P36170	1169 aa		4.98	□□□□□ -1.61
SPC34	YKR037C	YHL026C	P38740	315 aa		4.98	□□□□□ -1.61
SPC34	YKR037C	MED6	P38782	295 aa		4.98	□□□□□ -1.61
SPC34	YKR037C	APE4	P38821	490 aa		4.98	□□□□□ -1.61
SPC34	YKR037C	VPS41	P38959	992 aa		4.98	□□□□□ -1.61
SPC34	YKR037C	PES4	P39684	611 aa		4.98	□□□□□ -1.61
SPC34	YKR037C	YIL060W	P40519	144 aa		4.98	□□□□□ -1.61
SPC34	YKR037C	LIF1	P53150	421 aa		4.98	□□□□□ -1.61
SPC34	YKR037C	DUG3	P53871	357 aa		4.98	□□□□□ -1.61
SPC34	YKR037C	YNL134C	P53912	376 aa	Known RBP	4.98	□□□□□ -1.61
SPC34	YKR037C	RRI1	Q12468	440 aa		4.98	□□□□□ -1.61
SPC34	YKR037C	ISN1	Q99312	450 aa		4.98	□□□□□ -1.61
SPC34	YKR037C	RPL31B	P0C2H9	113 aa	Known RBP	4.97	□□□□□ -1.61
SPC34	YKR037C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
SPC34	YKR037C	RPB8	P20436	146 aa		4.97	□□□□□ -1.61
SPC34	YKR037C	SUI2	P20459	304 aa	Known RBP	4.97	□□□□□ -1.61
SPC34	YKR037C	COQ3	P27680	312 aa		4.97	□□□□□ -1.61
SPC34	YKR037C	CSE1	P33307	960 aa		4.97	□□□□□ -1.61
SPC34	YKR037C	ROT2	P38138	954 aa		4.97	□□□□□ -1.61
SPC34	YKR037C	EAF7	P53911	425 aa	Known RBP	4.97	□□□□□ -1.61
SPC34	YKR037C	VPS9	P54787	451 aa		4.97	□□□□□ -1.61
SPC34	YKR037C	PAR32	Q12515	295 aa	Known RBP	4.97	□□□□□ -1.61
SPC34	YKR037C	YMR085W	P0CF18	432 aa		4.96	□□□□□ -1.62
SPC34	YKR037C	RME1	P32338	300 aa	Known RBP	4.96	□□□□□ -1.62
SPC34	YKR037C	TUL1	P36096	758 aa		4.96	□□□□□ -1.62
SPC34	YKR037C	UBA4	P38820	440 aa		4.96	□□□□□ -1.62
SPC34	YKR037C	VRG4	P40107	337 aa		4.96	□□□□□ -1.62
SPC34	YKR037C	LCB2	P40970	561 aa		4.96	□□□□□ -1.62
SPC34	YKR037C	SAD1	P43589	448 aa		4.96	□□□□□ -1.62
SPC34	YKR037C	SNG1	P46950	547 aa		4.96	□□□□□ -1.62
SPC34	YKR037C	NMD5	P46970	1048 aa		4.96	□□□□□ -1.62
SPC34	YKR037C	AIM22	P47051	409 aa		4.96	□□□□□ -1.62
SPC34	YKR037C	YNL144C	P53907	740 aa		4.96	□□□□□ -1.62
SPC34	YKR037C	KAP120	Q02932	1032 aa		4.96	□□□□□ -1.62
SPC34	YKR037C	GAL4	P04386	881 aa		4.95	□□□□□ -1.62
SPC34	YKR037C	CNA1	P23287	553 aa		4.95	□□□□□ -1.62
SPC34	YKR037C	VPH1	P32563	840 aa	Known RBP	4.95	□□□□□ -1.62
SPC34	YKR037C	RML2	P32611	393 aa		4.95	□□□□□ -1.62
SPC34	YKR037C	YME2	P32843	850 aa		4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms