RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C POP6P53218 158 aa3.13□□□□□ -1.91
YPT52YKR014C MDG1P53885 366 aa3.13□□□□□ -1.91
YPT52YKR014C NCS2P53923 493 aaPredicted RBP3.13□□□□□ -1.91
YPT52YKR014C ODC1Q03028 310 aa3.13□□□□□ -1.91
YPT52YKR014C PBA1Q05778 276 aa3.13□□□□□ -1.91
YPT52YKR014C ESA1Q08649 445 aa3.13□□□□□ -1.91
YPT52YKR014C YOR387CQ08910 206 aa3.13□□□□□ -1.91
YPT52YKR014C YPL199CQ08954 240 aa3.13□□□□□ -1.91
YPT52YKR014C RIM20Q12033 661 aa3.13□□□□□ -1.91
YPT52YKR014C ATG29Q12092 213 aa3.13□□□□□ -1.91
YPT52YKR014C RNA14P25298 677 aaKnown RBP3.12□□□□□ -1.91
YPT52YKR014C LDB16P25587 256 aa3.12□□□□□ -1.91
YPT52YKR014C AFG1P32317 509 aa3.12□□□□□ -1.91
YPT52YKR014C SDH3P33421 198 aa3.12□□□□□ -1.91
YPT52YKR014C SPO22P40511 975 aa3.12□□□□□ -1.91
YPT52YKR014C SSN8P47821 323 aa3.12□□□□□ -1.91
YPT52YKR014C YGL108CP53139 140 aa3.12□□□□□ -1.91
YPT52YKR014C RMD9P53140 646 aaKnown RBP3.12□□□□□ -1.91
YPT52YKR014C ARE2P53629 642 aaKnown RBP3.12□□□□□ -1.91
YPT52YKR014C SLG1P54867 378 aa3.12□□□□□ -1.91
YPT52YKR014C GIR2Q03768 265 aaPredicted RBP3.12□□□□□ -1.91
YPT52YKR014C MFB1Q04922 465 aa3.12□□□□□ -1.91
YPT52YKR014C IMH1Q06704 911 aaKnown RBP3.12□□□□□ -1.91
YPT52YKR014C YLR108CQ12259 485 aa3.12□□□□□ -1.91
YPT52YKR014C MRPL4P36517 319 aa3.11□□□□□ -1.91
YPT52YKR014C UTP9P38882 575 aaKnown RBP3.11□□□□□ -1.91
YPT52YKR014C YEL057CP39983 233 aa3.11□□□□□ -1.91
YPT52YKR014C HXT14P42833 540 aa3.11□□□□□ -1.91
YPT52YKR014C ADD37Q03233 198 aa3.11□□□□□ -1.91
YPT52YKR014C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
YPT52YKR014C MRP7P12687 371 aa3.1□□□□□ -1.91
YPT52YKR014C MET8P15807 274 aa3.1□□□□□ -1.91
YPT52YKR014C SPS22P25380 463 aa3.1□□□□□ -1.91
YPT52YKR014C NAM9P27929 486 aa3.1□□□□□ -1.91
YPT52YKR014C IDH2P28241 369 aaKnown RBP3.1□□□□□ -1.91
YPT52YKR014C ARO2P28777 376 aaKnown RBP3.1□□□□□ -1.91
YPT52YKR014C YEL045CP32616 141 aa3.1□□□□□ -1.91
YPT52YKR014C PMT1P33775 817 aa3.1□□□□□ -1.91
YPT52YKR014C OTU2P38747 307 aaKnown RBP3.1□□□□□ -1.91
YPT52YKR014C YIL067CP40514 678 aa3.1□□□□□ -1.91
YPT52YKR014C GCD10P41814 478 aa3.1□□□□□ -1.91
YPT52YKR014C YGR210CP42942 411 aa3.1□□□□□ -1.91
YPT52YKR014C YGR149WP48236 432 aa3.1□□□□□ -1.91
YPT52YKR014C GOR1P53839 350 aa3.1□□□□□ -1.91
YPT52YKR014C DSL1P53847 754 aa3.1□□□□□ -1.91
YPT52YKR014C ARK1P53974 638 aa3.1□□□□□ -1.91
YPT52YKR014C ELP3Q02908 557 aaKnown RBP3.1□□□□□ -1.91
YPT52YKR014C MRD1Q06106 887 aaKnown RBP3.1□□□□□ -1.91
YPT52YKR014C THP3Q12049 470 aaKnown RBP3.1□□□□□ -1.91
YPT52YKR014C MED1Q12321 566 aa3.1□□□□□ -1.91
YPT52YKR014C ARG3P05150 338 aa3.09□□□□□ -1.91
YPT52YKR014C SPS4P09937 338 aa3.09□□□□□ -1.91
YPT52YKR014C CPR4P25334 318 aa3.09□□□□□ -1.91
YPT52YKR014C SPB1P25582 841 aaPredicted RBP3.09□□□□□ -1.91
YPT52YKR014C SEC66P33754 206 aa3.09□□□□□ -1.91
YPT52YKR014C WWM1P43582 211 aaKnown RBP3.09□□□□□ -1.91
YPT52YKR014C SDT1P53078 280 aa3.09□□□□□ -1.91
YPT52YKR014C MRP51Q02950 344 aa3.09□□□□□ -1.91
YPT52YKR014C ERV2Q12284 196 aa3.09□□□□□ -1.91
YPT52YKR014C CHS1P08004 1131 aa3.08□□□□□ -1.92
YPT52YKR014C SAM1P10659 382 aaKnown RBP3.08□□□□□ -1.92
YPT52YKR014C ATP10P18496 279 aa3.08□□□□□ -1.92
YPT52YKR014C SAM2P19358 384 aaKnown RBP3.08□□□□□ -1.92
YPT52YKR014C THI2P38141 450 aa3.08□□□□□ -1.92
YPT52YKR014C PTH1P38876 190 aaKnown RBP3.08□□□□□ -1.92
YPT52YKR014C RRT5P43607 289 aa3.08□□□□□ -1.92
YPT52YKR014C ART5P53244 586 aaKnown RBP3.08□□□□□ -1.92
YPT52YKR014C RQC1Q05468 723 aaKnown RBP3.08□□□□□ -1.92
YPT52YKR014C COG4Q06096 861 aa3.08□□□□□ -1.92
YPT52YKR014C RRI2Q12348 645 aa3.08□□□□□ -1.92
YPT52YKR014C GPI10P30777 616 aa3.07□□□□□ -1.92
YPT52YKR014C RPN12P32496 274 aa3.07□□□□□ -1.92
YPT52YKR014C STB6P36085 766 aa3.07□□□□□ -1.92
YPT52YKR014C YCR041WP37265 110 aa3.07□□□□□ -1.92
YPT52YKR014C MIX23P38162 196 aa3.07□□□□□ -1.92
YPT52YKR014C PRE5P40302 234 aaKnown RBP3.07□□□□□ -1.92
YPT52YKR014C MET18P40469 1032 aa3.07□□□□□ -1.92
YPT52YKR014C VTC2P43585 828 aa3.07□□□□□ -1.92
YPT52YKR014C PCP1P53259 346 aa3.07□□□□□ -1.92
YPT52YKR014C HSP31Q04432 237 aa3.07□□□□□ -1.92
YPT52YKR014C TSR1Q07381 788 aaKnown RBP3.07□□□□□ -1.92
YPT52YKR014C RIB5P38145 238 aa3.06□□□□□ -1.92
YPT52YKR014C KEL1P38853 1164 aaKnown RBP3.06□□□□□ -1.92
YPT52YKR014C YMR147WP40218 223 aaKnown RBP3.06□□□□□ -1.92
YPT52YKR014C LAM5P43560 674 aa3.06□□□□□ -1.92
YPT52YKR014C ECM27P47144 725 aa3.06□□□□□ -1.92
YPT52YKR014C YIP1P53039 248 aa3.06□□□□□ -1.92
YPT52YKR014C TOF1P53840 1238 aa3.06□□□□□ -1.92
YPT52YKR014C TIM10P87108 93 aa3.06□□□□□ -1.92
YPT52YKR014C YDR387CQ04162 555 aa3.06□□□□□ -1.92
YPT52YKR014C TAP42Q04372 366 aa3.06□□□□□ -1.92
YPT52YKR014C RRG7Q08774 242 aaPredicted RBP3.06□□□□□ -1.92
YPT52YKR014C PKH2Q12236 1081 aaKnown RBP3.06□□□□□ -1.92
YPT52YKR014C HIS4P00815 799 aaKnown RBP3.05□□□□□ -1.92
YPT52YKR014C GPH1P06738 902 aaKnown RBP3.05□□□□□ -1.92
YPT52YKR014C APE2P32454 952 aaKnown RBP3.05□□□□□ -1.92
YPT52YKR014C OST1P41543 476 aaKnown RBP3.05□□□□□ -1.92
YPT52YKR014C TFG2P41896 400 aaPredicted RBP3.05□□□□□ -1.92
YPT52YKR014C TRS85P46944 698 aa3.05□□□□□ -1.92
YPT52YKR014C JJJ1P53863 590 aa3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 60.4 ms