RNA–Protein interactions for RNA: YIL111W

COX5B, Transcript of Subunit Vb of cytochrome c oxidase, yeast

Gene COX5B, Length 456 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
COX5B	YIL111W	MSG5	P38590	489 aa		0.84	□□□□□ -2.27
COX5B	YIL111W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	0.84	□□□□□ -2.27	not detected
COX5B	YIL111W	CAF130	P53280	1122 aa	Predicted RBP	0.84	□□□□□ -2.27
COX5B	YIL111W	OGG1	P53397	376 aa	Predicted RBP	0.84	□□□□□ -2.27
COX5B	YIL111W	HUA2	Q12134	243 aa		0.84	□□□□□ -2.27
COX5B	YIL111W	RLM1	Q12224	676 aa		0.84	□□□□□ -2.27
COX5B	YIL111W	YPT6	Q99260	215 aa		0.84	□□□□□ -2.27
COX5B	YIL111W	GAL80	P04387	435 aa		0.83	□□□□□ -2.28
COX5B	YIL111W	LEU4	P06208	619 aa	Known RBP	0.83	□□□□□ -2.28
COX5B	YIL111W	CDC16	P09798	840 aa		0.83	□□□□□ -2.28
COX5B	YIL111W	NFT1	P0CE68	1218 aa		0.83	□□□□□ -2.28
COX5B	YIL111W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	0.83	□□□□□ -2.28	not detected
COX5B	YIL111W	PRP2	P20095	876 aa	Predicted RBP	0.83	□□□□□ -2.28
COX5B	YIL111W	HCS1	P34243	683 aa		0.83	□□□□□ -2.28
COX5B	YIL111W	MID2	P36027	376 aa		0.83	□□□□□ -2.28
COX5B	YIL111W	TCD2	P36101	447 aa	Known RBP	0.83	□□□□□ -2.28
COX5B	YIL111W	LAM5	P43560	674 aa		0.83	□□□□□ -2.28
COX5B	YIL111W	TRS85	P46944	698 aa		0.83	□□□□□ -2.28
COX5B	YIL111W	BRO1	P48582	844 aa		0.83	□□□□□ -2.28
COX5B	YIL111W	VID30	P53076	958 aa		0.83	□□□□□ -2.28
COX5B	YIL111W	DUO1	P53168	247 aa	Known RBP	0.83	□□□□□ -2.28
COX5B	YIL111W	CWC25	P53854	179 aa	Known RBP	0.83	□□□□□ -2.28
COX5B	YIL111W	KTR5	P53966	522 aa	Predicted RBP	0.83	□□□□□ -2.28
COX5B	YIL111W	HXT11	P54862	567 aa		0.83	□□□□□ -2.28
COX5B	YIL111W	PNG1	Q02890	363 aa		0.83	□□□□□ -2.28
COX5B	YIL111W	ODC1	Q03028	310 aa		0.83	□□□□□ -2.28
COX5B	YIL111W	PPM1	Q04081	328 aa		0.83	□□□□□ -2.28
COX5B	YIL111W	YEH1	Q07804	573 aa		0.83	□□□□□ -2.28
COX5B	YIL111W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	0.83	□□□□□ -2.28	not detected
COX5B	YIL111W	MUM3	Q08750	479 aa		0.83	□□□□□ -2.28
COX5B	YIL111W	NOP58	Q12499	511 aa	Known RBP	0.83	□□□□□ -2.28
COX5B	YIL111W	TRP1	P00912	224 aa		0.82	□□□□□ -2.28
COX5B	YIL111W	HSC82	P15108	705 aa	Known RBP	0.82	□□□□□ -2.28
COX5B	YIL111W	SLY1	P22213	666 aa		0.82	□□□□□ -2.28
COX5B	YIL111W	SPS22	P25380	463 aa		0.82	□□□□□ -2.28
COX5B	YIL111W	MCM10	P32354	571 aa		0.82	□□□□□ -2.28
COX5B	YIL111W	MUD2	P36084	527 aa	Known RBP	0.82	□□□□□ -2.28
COX5B	YIL111W	YCR041W	P37265	110 aa		0.82	□□□□□ -2.28
COX5B	YIL111W	CBP4	P37267	147 aa		0.82	□□□□□ -2.28
COX5B	YIL111W	MUM2	P38236	366 aa		0.82	□□□□□ -2.28
COX5B	YIL111W	YBR225W	P38321	900 aa		0.82	□□□□□ -2.28
COX5B	YIL111W	MST28	P39552	234 aa		0.82	□□□□□ -2.28
COX5B	YIL111W	ERP2	P39704	215 aa		0.82	□□□□□ -2.28
COX5B	YIL111W	SSU1	P41930	458 aa		0.82	□□□□□ -2.28
COX5B	YIL111W	UPF3	P48412	387 aa	Known RBP	0.82	□□□□□ -2.28
COX5B	YIL111W	OCA1	P50946	238 aa	Predicted RBP	0.82	□□□□□ -2.28
COX5B	YIL111W	PCP1	P53259	346 aa		0.82	□□□□□ -2.28
COX5B	YIL111W	MTM1	P53320	366 aa		0.82	□□□□□ -2.28
COX5B	YIL111W	SVL3	Q03088	825 aa	Known RBP	0.82	□□□□□ -2.28
COX5B	YIL111W	RSN1	Q03516	953 aa		0.82	□□□□□ -2.28
COX5B	YIL111W	HER2	Q03557	464 aa		0.82	□□□□□ -2.28
COX5B	YIL111W	YMR018W	Q04364	514 aa		0.82	□□□□□ -2.28
COX5B	YIL111W	MFB1	Q04922	465 aa		0.82	□□□□□ -2.28
COX5B	YIL111W	VPS38	Q05919	439 aa		0.82	□□□□□ -2.28
COX5B	YIL111W	BRR1	Q99177	341 aa	Predicted RBP	0.82	□□□□□ -2.28
COX5B	YIL111W	SEM1	O94742	89 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	AAC3	P18238	307 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	OLE1	P21147	510 aa	Known RBP	0.81	□□□□□ -2.28
COX5B	YIL111W	TRX2	P22803	104 aa	Known RBP	0.81	□□□□□ -2.28
COX5B	YIL111W	PRD1	P25375	712 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	PEP3	P27801	918 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	ITR1	P30605	584 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	NUP2	P32499	720 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	WBP1	P33767	430 aa	Known RBP	0.81	□□□□□ -2.28
COX5B	YIL111W	REG2	P38232	338 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	YBR137W	P38276	179 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	FLC2	P39719	783 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	YMR147W	P40218	223 aa	Known RBP	0.81	□□□□□ -2.28
COX5B	YIL111W	DOT5	P40553	215 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	URB2	P47108	1174 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	YJR085C	P47131	105 aa	Known RBP	0.81	□□□□□ -2.28
COX5B	YIL111W	MRX6	P48564	524 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	YIP1	P53039	248 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	SLG1	P54867	378 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	TIM10	P87108	93 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	MRP51	Q02950	344 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	VMS1	Q04311	632 aa	Known RBP	0.81	□□□□□ -2.28
COX5B	YIL111W	OPY2	Q06810	360 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	SNX3	Q08826	162 aa	Known RBP	0.81	□□□□□ -2.28
COX5B	YIL111W	FDH1	Q08911	376 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	NMD4	Q12129	218 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	YPR022C	Q12139	1133 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	RRD2	Q12461	358 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	RAD61	Q99359	647 aa		0.81	□□□□□ -2.28
COX5B	YIL111W	SEC53	P07283	254 aa	Known RBP	0.8	□□□□□ -2.28
COX5B	YIL111W	RPL31B	P0C2H9	113 aa	Known RBP	0.8	□□□□□ -2.28
COX5B	YIL111W	MET8	P15807	274 aa		0.8	□□□□□ -2.28
COX5B	YIL111W	ATP10	P18496	279 aa		0.8	□□□□□ -2.28
COX5B	YIL111W	SNT1	P25357	1226 aa		0.8	□□□□□ -2.28
COX5B	YIL111W	TIP1	P27654	210 aa	Predicted RBP	0.8	□□□□□ -2.28
COX5B	YIL111W	POP5	P28005	173 aa		0.8	□□□□□ -2.28
COX5B	YIL111W	SSH4	P32343	579 aa		0.8	□□□□□ -2.28
COX5B	YIL111W	NPL6	P32832	435 aa		0.8	□□□□□ -2.28
COX5B	YIL111W	CSE2	P33308	149 aa		0.8	□□□□□ -2.28
COX5B	YIL111W	THI2	P38141	450 aa		0.8	□□□□□ -2.28
COX5B	YIL111W	AIM10	P39965	576 aa	Known RBP	0.8	□□□□□ -2.28
COX5B	YIL111W	UTP18	P40362	594 aa	Predicted RBP	0.8	□□□□□ -2.28
COX5B	YIL111W	RTS3	P53289	263 aa		0.8	□□□□□ -2.28
COX5B	YIL111W	FRE4	P53746	719 aa		0.8	□□□□□ -2.28
COX5B	YIL111W	VPS75	P53853	264 aa		0.8	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 19 ms