RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W PHO84P25297 587 aaKnown RBP4.71□□□□□ -1.66
DEG1YFL001W KRE2P27809 442 aa4.71□□□□□ -1.66
DEG1YFL001W SMI1P32566 505 aa4.71□□□□□ -1.66
DEG1YFL001W MSN2P33748 704 aa4.71□□□□□ -1.66
DEG1YFL001W STV1P37296 890 aa4.71□□□□□ -1.66
DEG1YFL001W ADH5P38113 351 aaKnown RBP4.71□□□□□ -1.66
DEG1YFL001W DUG2P38149 878 aa4.71□□□□□ -1.66
DEG1YFL001W MMS4P38257 691 aa4.71□□□□□ -1.66
DEG1YFL001W YSW1P38280 609 aa4.71□□□□□ -1.66
DEG1YFL001W LAG1P38703 411 aa4.71□□□□□ -1.66
DEG1YFL001W FET5P43561 622 aa4.71□□□□□ -1.66
DEG1YFL001W YJR154WP47181 346 aa4.71□□□□□ -1.66
DEG1YFL001W ZPR1P53303 486 aaKnown RBP4.71□□□□□ -1.66
DEG1YFL001W SOL4P53315 255 aa4.71□□□□□ -1.66
DEG1YFL001W ATP23P53722 227 aa4.71□□□□□ -1.66
DEG1YFL001W MCP2Q06567 569 aa4.71□□□□□ -1.66
DEG1YFL001W RKM1Q08961 583 aaPredicted RBP4.71□□□□□ -1.66
DEG1YFL001W ULS1Q08562 1619 aa4.7□□□□□ -1.66
DEG1YFL001W CAT8P39113 1433 aa4.7□□□□□ -1.66
DEG1YFL001W PDR12Q02785 1511 aa4.7□□□□□ -1.66
DEG1YFL001W ATP10P18496 279 aa4.7□□□□□ -1.66
DEG1YFL001W COQ3P27680 312 aa4.7□□□□□ -1.66
DEG1YFL001W GYP6P32806 458 aa4.7□□□□□ -1.66
DEG1YFL001W GDT1P38301 280 aaPredicted RBP4.7□□□□□ -1.66
DEG1YFL001W VHC1P38329 1120 aa4.7□□□□□ -1.66
DEG1YFL001W ATF1P40353 525 aa4.7□□□□□ -1.66
DEG1YFL001W VHS2P40463 436 aa4.7□□□□□ -1.66
DEG1YFL001W TFG2P41896 400 aaPredicted RBP4.7□□□□□ -1.66
DEG1YFL001W BUD32P53323 261 aa4.7□□□□□ -1.66
DEG1YFL001W SEC5P89102 971 aa4.7□□□□□ -1.66
DEG1YFL001W PPM1Q04081 328 aa4.7□□□□□ -1.66
DEG1YFL001W YDR341CQ05506 607 aaKnown RBP4.7□□□□□ -1.66
DEG1YFL001W YLR456WQ06199 204 aa4.7□□□□□ -1.66
DEG1YFL001W YDL218WQ07629 317 aa4.7□□□□□ -1.66
DEG1YFL001W RDR1Q08904 546 aa4.7□□□□□ -1.66
DEG1YFL001W RRI1Q12468 440 aa4.7□□□□□ -1.66
DEG1YFL001W MTR10Q99189 972 aa4.7□□□□□ -1.66
DEG1YFL001W NUP157P40064 1391 aaKnown RBP4.69□□□□□ -1.66
DEG1YFL001W YRF1-1P0CX20 1796 aa4.69□□□□□ -1.66
DEG1YFL001W YRF1-5P0CX21 1796 aa4.69□□□□□ -1.66
DEG1YFL001W YRF1-8P0CX22 1796 aa4.69□□□□□ -1.66
DEG1YFL001W SUC2P00724 532 aa4.69□□□□□ -1.66
DEG1YFL001W STF1P01098 86 aa4.69□□□□□ -1.66
DEG1YFL001W GAL4P04386 881 aa4.69□□□□□ -1.66
DEG1YFL001W RPL6BP05739 176 aaKnown RBP4.69□□□□□ -1.66
DEG1YFL001W DAP2P18962 818 aa4.69□□□□□ -1.66
DEG1YFL001W TYR1P20049 452 aa4.69□□□□□ -1.66
DEG1YFL001W ILV6P25605 309 aaKnown RBP4.69□□□□□ -1.66
DEG1YFL001W SNC1P31109 117 aa4.69□□□□□ -1.66
DEG1YFL001W SIN4P32259 974 aa4.69□□□□□ -1.66
DEG1YFL001W ATP11P32453 318 aa4.69□□□□□ -1.66
DEG1YFL001W YEL043WP32618 956 aa4.69□□□□□ -1.66
DEG1YFL001W ZTA1P38230 334 aaKnown RBP4.69□□□□□ -1.66
DEG1YFL001W LEU5P38702 357 aa4.69□□□□□ -1.66
DEG1YFL001W GND1P38720 489 aaKnown RBP4.69□□□□□ -1.66
DEG1YFL001W WSS1P38838 269 aa4.69□□□□□ -1.66
DEG1YFL001W NAS2P40555 220 aa4.69□□□□□ -1.66
DEG1YFL001W ALT2P52892 507 aa4.69□□□□□ -1.66
DEG1YFL001W KTR5P53966 522 aaPredicted RBP4.69□□□□□ -1.66
DEG1YFL001W RHO4Q00246 291 aa4.69□□□□□ -1.66
DEG1YFL001W RPL6AQ02326 176 aaKnown RBP4.69□□□□□ -1.66
DEG1YFL001W DBP9Q06218 594 aaKnown RBP4.69□□□□□ -1.66
DEG1YFL001W DIS3Q08162 1001 aaKnown RBP4.69□□□□□ -1.66
DEG1YFL001W REX3Q12090 404 aa4.69□□□□□ -1.66
DEG1YFL001W EDE1P34216 1381 aa4.68□□□□□ -1.66
DEG1YFL001W IRC20Q06554 1556 aa4.68□□□□□ -1.66
DEG1YFL001W SEC63P14906 663 aa4.68□□□□□ -1.66
DEG1YFL001W URE2P23202 354 aaKnown RBP4.68□□□□□ -1.66
DEG1YFL001W BEM1P29366 551 aa4.68□□□□□ -1.66
DEG1YFL001W SPC110P32380 944 aa4.68□□□□□ -1.66
DEG1YFL001W RFC3P38629 340 aa4.68□□□□□ -1.66
DEG1YFL001W FAD1P38913 306 aa4.68□□□□□ -1.66
DEG1YFL001W MLH1P38920 769 aa4.68□□□□□ -1.66
DEG1YFL001W RPS0BP46654 252 aaKnown RBP4.68□□□□□ -1.66
DEG1YFL001W NMD5P46970 1048 aa4.68□□□□□ -1.66
DEG1YFL001W MDE1P47095 244 aa4.68□□□□□ -1.66
DEG1YFL001W GPI8P49018 411 aa4.68□□□□□ -1.66
DEG1YFL001W SMA1Q02651 245 aa4.68□□□□□ -1.66
DEG1YFL001W CTL1Q03220 320 aaKnown RBP4.68□□□□□ -1.66
DEG1YFL001W MDM30Q05930 598 aa4.68□□□□□ -1.66
DEG1YFL001W OSW1Q08692 278 aa4.68□□□□□ -1.66
DEG1YFL001W PSY3Q12318 242 aa4.68□□□□□ -1.66
DEG1YFL001W FRE7Q12333 620 aa4.68□□□□□ -1.66
DEG1YFL001W YPR089WO13585 888 aa4.67□□□□□ -1.66
DEG1YFL001W CAR1P00812 333 aaKnown RBP4.67□□□□□ -1.66
DEG1YFL001W ARO3P14843 370 aaKnown RBP4.67□□□□□ -1.66
DEG1YFL001W MBR1P23493 339 aa4.67□□□□□ -1.66
DEG1YFL001W PRP21P32524 280 aaPredicted RBP4.67□□□□□ -1.66
DEG1YFL001W RRF1P38771 230 aa4.67□□□□□ -1.66
DEG1YFL001W SYG1P40528 902 aa4.67□□□□□ -1.66
DEG1YFL001W OCA2P53949 197 aa4.67□□□□□ -1.66
DEG1YFL001W IDP3P53982 420 aaKnown RBP4.67□□□□□ -1.66
DEG1YFL001W YPL014WQ02606 381 aa4.67□□□□□ -1.66
DEG1YFL001W NUP100Q02629 959 aa4.67□□□□□ -1.66
DEG1YFL001W VTC3Q02725 835 aa4.67□□□□□ -1.66
DEG1YFL001W RPN9Q04062 393 aaKnown RBP4.67□□□□□ -1.66
DEG1YFL001W POS5Q06892 414 aa4.67□□□□□ -1.66
DEG1YFL001W SSK1Q07084 712 aa4.67□□□□□ -1.66
DEG1YFL001W YLR278CQ05854 1341 aa4.67□□□□□ -1.66
DEG1YFL001W NUP170P38181 1502 aa4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 165.1 ms