RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W GLE1Q12315 538 aa6.73□□□□□ -1.33
PDA1YER178W NUM1Q00402 2748 aa6.72□□□□□ -1.33
PDA1YER178W EXO70P19658 623 aa6.72□□□□□ -1.33
PDA1YER178W NTH1P32356 751 aa6.72□□□□□ -1.33
PDA1YER178W ERG1P32476 496 aaKnown RBP6.72□□□□□ -1.33
PDA1YER178W HOG1P32485 435 aa6.72□□□□□ -1.33
PDA1YER178W CDC5P32562 705 aa6.72□□□□□ -1.33
PDA1YER178W YIL152WP40455 235 aa6.72□□□□□ -1.33
PDA1YER178W YIL086CP40503 102 aa6.72□□□□□ -1.33
PDA1YER178W PRM10P42946 383 aa6.72□□□□□ -1.33
PDA1YER178W MET12P46151 657 aa6.72□□□□□ -1.33
PDA1YER178W YGR266WP53326 701 aa6.72□□□□□ -1.33
PDA1YER178W YNR021WP53723 404 aaKnown RBP6.72□□□□□ -1.33
PDA1YER178W IRC13Q08630 104 aa6.72□□□□□ -1.33
PDA1YER178W RUP1Q12242 671 aa6.72□□□□□ -1.33
PDA1YER178W YPR064WQ12492 139 aa6.72□□□□□ -1.33
PDA1YER178W LAG2Q92325 660 aa6.72□□□□□ -1.33
PDA1YER178W ARG81P05085 880 aa6.71□□□□□ -1.34
PDA1YER178W TY2A-LR1P0C2J4 438 aa6.71□□□□□ -1.34
PDA1YER178W TY2A-FP0CX61 438 aa6.71□□□□□ -1.34
PDA1YER178W TY2A-GR2P0CX62 438 aa6.71□□□□□ -1.34
PDA1YER178W PHO81P17442 1178 aa6.71□□□□□ -1.34
PDA1YER178W CDC10P25342 322 aaKnown RBP6.71□□□□□ -1.34
PDA1YER178W TY2A-CP25383 438 aa6.71□□□□□ -1.34
PDA1YER178W NIP1P32497 812 aaKnown RBP6.71□□□□□ -1.34
PDA1YER178W ATO2P32907 282 aa6.71□□□□□ -1.34
PDA1YER178W APT2P36973 181 aa6.71□□□□□ -1.34
PDA1YER178W FTH1P38310 465 aa6.71□□□□□ -1.34
PDA1YER178W ARN1P38731 627 aa6.71□□□□□ -1.34
PDA1YER178W YHR210CP38893 341 aa6.71□□□□□ -1.34
PDA1YER178W BEM4P39011 633 aa6.71□□□□□ -1.34
PDA1YER178W PMT4P46971 762 aa6.71□□□□□ -1.34
PDA1YER178W IBA57P47158 497 aa6.71□□□□□ -1.34
PDA1YER178W CSL4P53859 292 aaPredicted RBP6.71□□□□□ -1.34
PDA1YER178W SED5Q01590 340 aa6.71□□□□□ -1.34
PDA1YER178W VPS16Q03308 798 aa6.71□□□□□ -1.34
PDA1YER178W TY2A-DR2Q03483 438 aa6.71□□□□□ -1.34
PDA1YER178W DIA2Q08496 732 aaPredicted RBP6.71□□□□□ -1.34
PDA1YER178W TY2A-BQ12260 438 aa6.71□□□□□ -1.34
PDA1YER178W TY2A-OR2Q12293 438 aa6.71□□□□□ -1.34
PDA1YER178W TY2A-DR1Q12392 438 aa6.71□□□□□ -1.34
PDA1YER178W TY2A-OR1Q12439 438 aa6.71□□□□□ -1.34
PDA1YER178W PNO1Q99216 274 aaKnown RBP6.71□□□□□ -1.34
PDA1YER178W TY2A-DR3Q99303 438 aa6.71□□□□□ -1.34
PDA1YER178W HTA2P04912 132 aa6.7□□□□□ -1.34
PDA1YER178W LAT1P12695 482 aaKnown RBP6.7□□□□□ -1.34
PDA1YER178W SYP1P25623 870 aaKnown RBP6.7□□□□□ -1.34
PDA1YER178W SIN4P32259 974 aa6.7□□□□□ -1.34
PDA1YER178W SUI1P32911 108 aaKnown RBP6.7□□□□□ -1.34
PDA1YER178W FRE2P36033 711 aa6.7□□□□□ -1.34
PDA1YER178W NEO1P40527 1151 aa6.7□□□□□ -1.34
PDA1YER178W TED1P40533 473 aa6.7□□□□□ -1.34
PDA1YER178W FMP32P43557 207 aa6.7□□□□□ -1.34
PDA1YER178W AIM22P47051 409 aa6.7□□□□□ -1.34
PDA1YER178W JHD2P47156 728 aaPredicted RBP6.7□□□□□ -1.34
PDA1YER178W USE1P53146 245 aa6.7□□□□□ -1.34
PDA1YER178W PRP38Q00723 242 aaPredicted RBP6.7□□□□□ -1.34
PDA1YER178W MUS81Q04149 632 aaPredicted RBP6.7□□□□□ -1.34
PDA1YER178W YDR338CQ05497 695 aa6.7□□□□□ -1.34
PDA1YER178W PDR8Q06149 701 aa6.7□□□□□ -1.34
PDA1YER178W YLR413WQ06689 675 aa6.7□□□□□ -1.34
PDA1YER178W XYL2Q07993 356 aa6.7□□□□□ -1.34
PDA1YER178W REX4Q08237 289 aa6.7□□□□□ -1.34
PDA1YER178W FRE7Q12333 620 aa6.7□□□□□ -1.34
PDA1YER178W RPS17AP02407 136 aaKnown RBP6.69□□□□□ -1.34
PDA1YER178W BCY1P07278 416 aaKnown RBP6.69□□□□□ -1.34
PDA1YER178W RPS17BP14127 136 aaKnown RBP6.69□□□□□ -1.34
PDA1YER178W VPS33P20795 691 aa6.69□□□□□ -1.34
PDA1YER178W SEC17P32602 292 aa6.69□□□□□ -1.34
PDA1YER178W PET127P32606 800 aa6.69□□□□□ -1.34
PDA1YER178W SPO23P33757 523 aa6.69□□□□□ -1.34
PDA1YER178W YCR087C-AP37263 153 aa6.69□□□□□ -1.34
PDA1YER178W ASC1P38011 319 aaKnown RBP6.69□□□□□ -1.34
PDA1YER178W BNA4P38169 460 aa6.69□□□□□ -1.34
PDA1YER178W HPM1P40481 377 aa6.69□□□□□ -1.34
PDA1YER178W PAC11P40960 533 aa6.69□□□□□ -1.34
PDA1YER178W RPL10P41805 221 aaKnown RBP6.69□□□□□ -1.34
PDA1YER178W TRM9P49957 279 aa6.69□□□□□ -1.34
PDA1YER178W IMA1P53051 589 aa6.69□□□□□ -1.34
PDA1YER178W RRN11Q04712 507 aa6.69□□□□□ -1.34
PDA1YER178W GIC2Q06648 383 aa6.69□□□□□ -1.34
PDA1YER178W YDL121CQ07541 149 aa6.69□□□□□ -1.34
PDA1YER178W NMD4Q12129 218 aa6.69□□□□□ -1.34
PDA1YER178W SEC39Q12745 709 aa6.69□□□□□ -1.34
PDA1YER178W YPR096CO13587 100 aa6.68□□□□□ -1.34
PDA1YER178W PRP4P20053 465 aaKnown RBP6.68□□□□□ -1.34
PDA1YER178W TAH1P25638 111 aaPredicted RBP6.68□□□□□ -1.34
PDA1YER178W TAF14P35189 244 aa6.68□□□□□ -1.34
PDA1YER178W RPS27AP35997 82 aaKnown RBP6.68□□□□□ -1.34
PDA1YER178W YRO2P38079 344 aa6.68□□□□□ -1.34
PDA1YER178W HEK2P38199 381 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
PDA1YER178W GDT1P38301 280 aaPredicted RBP6.68□□□□□ -1.34
PDA1YER178W COS111P38308 924 aa6.68□□□□□ -1.34
PDA1YER178W TSC10P38342 320 aa6.68□□□□□ -1.34
PDA1YER178W RPS27BP38711 82 aa6.68□□□□□ -1.34
PDA1YER178W YER158CP40095 573 aa6.68□□□□□ -1.34
PDA1YER178W MAD2P40958 196 aa6.68□□□□□ -1.34
PDA1YER178W UPF3P48412 387 aaKnown RBP6.68□□□□□ -1.34
PDA1YER178W RAD17P48581 401 aa6.68□□□□□ -1.34
PDA1YER178W YNL140CP53910 189 aa6.68□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms