RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W YCR043CP25361 127 aa6.45□□□□□ -1.38
LCP5YER127W RAD24P32641 659 aa6.45□□□□□ -1.38
LCP5YER127W TCM62P38228 572 aaKnown RBP6.45□□□□□ -1.38
LCP5YER127W YIL169CP40442 995 aa6.45□□□□□ -1.38
LCP5YER127W YFR016CP43597 1233 aaKnown RBP6.45□□□□□ -1.38
LCP5YER127W TDA7P53882 636 aaPredicted RBP6.45□□□□□ -1.38
LCP5YER127W HEF3P53978 1044 aaKnown RBP6.45□□□□□ -1.38
LCP5YER127W MSS11Q03825 758 aa6.45□□□□□ -1.38
LCP5YER127W ICT1Q12385 394 aa6.45□□□□□ -1.38
LCP5YER127W NFU1P32860 256 aa6.44□□□□□ -1.38
LCP5YER127W TRS65P32893 560 aa6.44□□□□□ -1.38
LCP5YER127W SEC66P33754 206 aa6.44□□□□□ -1.38
LCP5YER127W MIC60P36112 540 aa6.44□□□□□ -1.38
LCP5YER127W TIF4631P39935 952 aaKnown RBP6.44□□□□□ -1.38
LCP5YER127W LSM5P40089 93 aaKnown RBP6.44□□□□□ -1.38
LCP5YER127W BUD27P43573 796 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38not detected
LCP5YER127W ATG27P46989 271 aa6.44□□□□□ -1.38
LCP5YER127W YGL082WP53155 381 aa6.44□□□□□ -1.38
LCP5YER127W DRN1P53255 507 aaKnown RBP6.44□□□□□ -1.38
LCP5YER127W SRL1Q08673 210 aa6.44□□□□□ -1.38
LCP5YER127W ACH1P32316 526 aa6.43□□□□□ -1.38
LCP5YER127W RRP3P38712 501 aaKnown RBP6.43□□□□□ -1.38
LCP5YER127W TES1P41903 349 aaKnown RBP6.43□□□□□ -1.38
LCP5YER127W YJR154WP47181 346 aa6.43□□□□□ -1.38
LCP5YER127W ALT2P52892 507 aa6.43□□□□□ -1.38
LCP5YER127W YGR250CP53316 781 aaKnown RBP6.43□□□□□ -1.38
LCP5YER127W SAM50P53969 484 aa6.43□□□□□ -1.38
LCP5YER127W FMP42Q04991 504 aa6.43□□□□□ -1.38
LCP5YER127W CSR2Q12734 1121 aa6.43□□□□□ -1.38
LCP5YER127W PMS1P14242 873 aa6.42□□□□□ -1.38
LCP5YER127W TYR1P20049 452 aa6.42□□□□□ -1.38
LCP5YER127W RPN2P32565 945 aaKnown RBP6.42□□□□□ -1.38
LCP5YER127W TMT1P32643 299 aa6.42□□□□□ -1.38
LCP5YER127W MSN2P33748 704 aa6.42□□□□□ -1.38
LCP5YER127W SPC34P36131 295 aa6.42□□□□□ -1.38
LCP5YER127W DUG2P38149 878 aa6.42□□□□□ -1.38
LCP5YER127W MNP1P53163 194 aaPredicted RBP6.42□□□□□ -1.38
LCP5YER127W YAP7Q08182 245 aa6.42□□□□□ -1.38
LCP5YER127W SEC62P21825 274 aa6.41□□□□□ -1.38
LCP5YER127W PPH22P23595 377 aa6.41□□□□□ -1.38
LCP5YER127W ERG1P32476 496 aaKnown RBP6.41□□□□□ -1.38
LCP5YER127W VPS17P32913 551 aa6.41□□□□□ -1.38
LCP5YER127W YNK1P36010 153 aaKnown RBP6.41□□□□□ -1.38
LCP5YER127W EFM2P38347 419 aa6.41□□□□□ -1.38
LCP5YER127W YER130CP39959 443 aa6.41□□□□□ -1.38
LCP5YER127W YPL068CQ02749 293 aa6.41□□□□□ -1.38
LCP5YER127W ERO1Q03103 563 aa6.41□□□□□ -1.38
LCP5YER127W GIR2Q03768 265 aaPredicted RBP6.41□□□□□ -1.38
LCP5YER127W YLR281CQ05863 155 aa6.41□□□□□ -1.38
LCP5YER127W BRR1Q99177 341 aaPredicted RBP6.41□□□□□ -1.38
LCP5YER127W BAR1P12630 587 aa6.4□□□□□ -1.38
LCP5YER127W APE1P14904 514 aa6.4□□□□□ -1.38
LCP5YER127W AFG1P32317 509 aa6.4□□□□□ -1.38
LCP5YER127W SHC1P39000 512 aa6.4□□□□□ -1.38
LCP5YER127W YIR014WP40570 242 aa6.4□□□□□ -1.38
LCP5YER127W SSU1P41930 458 aa6.4□□□□□ -1.38
LCP5YER127W RBS1Q05672 457 aaKnown RBP6.4□□□□□ -1.38
LCP5YER127W VTA1Q06263 330 aa6.4□□□□□ -1.38
LCP5YER127W PDX1P16451 410 aa6.39□□□□□ -1.39
LCP5YER127W GLN3P18494 730 aa6.39□□□□□ -1.39
LCP5YER127W REC107P21651 314 aa6.39□□□□□ -1.39
LCP5YER127W RPC53P25441 422 aa6.39□□□□□ -1.39
LCP5YER127W RAD14P28519 371 aa6.39□□□□□ -1.39
LCP5YER127W RKM3P38222 552 aa6.39□□□□□ -1.39
LCP5YER127W POP1P41812 875 aa6.39□□□□□ -1.39
LCP5YER127W SAD1P43589 448 aa6.39□□□□□ -1.39
LCP5YER127W DLD2P46681 530 aaKnown RBP6.39□□□□□ -1.39
LCP5YER127W YGR149WP48236 432 aa6.39□□□□□ -1.39
LCP5YER127W YEH2Q07950 538 aa6.39□□□□□ -1.39
LCP5YER127W THI20Q08224 551 aa6.39□□□□□ -1.39
LCP5YER127W NRT1Q08485 598 aa6.39□□□□□ -1.39
LCP5YER127W ERP4Q12450 207 aa6.39□□□□□ -1.39
LCP5YER127W SPB1P25582 841 aaPredicted RBP6.38□□□□□ -1.39
LCP5YER127W DBF4P32325 704 aa6.38□□□□□ -1.39
LCP5YER127W SMY1P32364 656 aaKnown RBP6.38□□□□□ -1.39
LCP5YER127W HXT3P32466 567 aaKnown RBP6.38□□□□□ -1.39
LCP5YER127W HCS1P34243 683 aa6.38□□□□□ -1.39
LCP5YER127W OSH3P38713 996 aaKnown RBP6.38□□□□□ -1.39
LCP5YER127W YJL068CP40363 299 aa6.38□□□□□ -1.39
LCP5YER127W YGL108CP53139 140 aa6.38□□□□□ -1.39
LCP5YER127W RPA49Q01080 415 aaPredicted RBP6.38□□□□□ -1.39
LCP5YER127W RBA50Q04418 439 aa6.38□□□□□ -1.39
LCP5YER127W IVY1Q04934 453 aa6.38□□□□□ -1.39
LCP5YER127W SUC2P00724 532 aa6.37□□□□□ -1.39
LCP5YER127W MES1P00958 751 aaKnown RBP6.37□□□□□ -1.39
LCP5YER127W IDH2P28241 369 aaKnown RBP6.37□□□□□ -1.39
LCP5YER127W UTR4P32626 227 aa6.37□□□□□ -1.39
LCP5YER127W ECM15P35195 104 aa6.37□□□□□ -1.39
LCP5YER127W KEL1P38853 1164 aaKnown RBP6.37□□□□□ -1.39
LCP5YER127W CSM2P40465 213 aa6.37□□□□□ -1.39
LCP5YER127W GUF1P46943 645 aa6.37□□□□□ -1.39
LCP5YER127W OCA1P50946 238 aaPredicted RBP6.37□□□□□ -1.39
LCP5YER127W CUL3P53202 744 aa6.37□□□□□ -1.39
LCP5YER127W LSC1P53598 329 aaKnown RBP6.37□□□□□ -1.39
LCP5YER127W SLD5Q03406 294 aa6.37□□□□□ -1.39
LCP5YER127W PHO92Q06390 306 aa6.37□□□□□ -1.39
LCP5YER127W BUD14P27637 709 aa6.36□□□□□ -1.39
LCP5YER127W ICL1P28240 557 aaPredicted RBP6.36□□□□□ -1.39
LCP5YER127W TUL1P36096 758 aa6.36□□□□□ -1.39
LCP5YER127W BZZ1P38822 633 aa6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms