RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C YPR089WO13585 888 aa1.29□□□□□ -2.2
SWI4YER111C RPL6BP05739 176 aaKnown RBP1.29□□□□□ -2.2
SWI4YER111C RPL1AP0CX43 217 aaKnown RBP1.29□□□□□ -2.2
SWI4YER111C RPL1BP0CX44 217 aaKnown RBP1.29□□□□□ -2.2
SWI4YER111C GLK1P17709 500 aaKnown RBP1.29□□□□□ -2.2
SWI4YER111C SPO7P18410 259 aa1.29□□□□□ -2.2
SWI4YER111C PRP2P20095 876 aaPredicted RBP1.29□□□□□ -2.2
SWI4YER111C KRR1P25586 316 aaPredicted RBP1.29□□□□□ -2.2
SWI4YER111C COQ3P27680 312 aa1.29□□□□□ -2.2
SWI4YER111C FUN19P28003 413 aaPredicted RBP1.29□□□□□ -2.2
SWI4YER111C BEM1P29366 551 aa1.29□□□□□ -2.2
SWI4YER111C YIP5P53108 310 aa1.29□□□□□ -2.2
SWI4YER111C SOL4P53315 255 aa1.29□□□□□ -2.2
SWI4YER111C OCA2P53949 197 aa1.29□□□□□ -2.2
SWI4YER111C ERG13P54839 491 aaKnown RBP1.29□□□□□ -2.2
SWI4YER111C RPL6AQ02326 176 aaKnown RBP1.29□□□□□ -2.2
SWI4YER111C HER1Q12276 1246 aa1.29□□□□□ -2.2
SWI4YER111C HSP42Q12329 375 aa1.29□□□□□ -2.2
SWI4YER111C PEP4P07267 405 aaKnown RBP1.28□□□□□ -2.2
SWI4YER111C PEP5P12868 1029 aa1.28□□□□□ -2.2
SWI4YER111C ATP10P18496 279 aa1.28□□□□□ -2.2
SWI4YER111C HIR2P32480 875 aa1.28□□□□□ -2.2
SWI4YER111C SEC66P33754 206 aa1.28□□□□□ -2.2
SWI4YER111C LTV1P34078 463 aa1.28□□□□□ -2.2
SWI4YER111C SWH1P35845 1188 aa1.28□□□□□ -2.2
SWI4YER111C MIA40P36046 403 aa1.28□□□□□ -2.2
SWI4YER111C RSM22P36056 628 aa1.28□□□□□ -2.2
SWI4YER111C TCM62P38228 572 aaKnown RBP1.28□□□□□ -2.2
SWI4YER111C YIL089WP40500 205 aa1.28□□□□□ -2.2
SWI4YER111C CDC1P40986 491 aa1.28□□□□□ -2.2
SWI4YER111C RPS10BP46784 105 aaKnown RBP1.28□□□□□ -2.2
SWI4YER111C BPL1P48445 690 aaPredicted RBP1.28□□□□□ -2.2
SWI4YER111C YPT11P48559 417 aa1.28□□□□□ -2.2
SWI4YER111C LYS20P48570 428 aaKnown RBP1.28□□□□□ -2.2
SWI4YER111C YGL082WP53155 381 aa1.28□□□□□ -2.2
SWI4YER111C DSL1P53847 754 aa1.28□□□□□ -2.2
SWI4YER111C HEF3P53978 1044 aaKnown RBP1.28□□□□□ -2.2
SWI4YER111C YPL014WQ02606 381 aa1.28□□□□□ -2.2
SWI4YER111C MSC1Q03104 513 aa1.28□□□□□ -2.2
SWI4YER111C IZH1Q03419 316 aa1.28□□□□□ -2.2
SWI4YER111C SPH1Q06160 661 aa1.28□□□□□ -2.2
SWI4YER111C PMR1P13586 950 aa1.28□□□□□ -2.2
SWI4YER111C RPI1P23250 407 aaKnown RBP1.28□□□□□ -2.2
SWI4YER111C RHB1P25378 209 aa1.28□□□□□ -2.2
SWI4YER111C MGR1P25573 417 aa1.28□□□□□ -2.2
SWI4YER111C PUP2P32379 260 aa1.28□□□□□ -2.2
SWI4YER111C ECM25P32525 599 aa1.28□□□□□ -2.2
SWI4YER111C PDR3P33200 976 aa1.28□□□□□ -2.2
SWI4YER111C MSN2P33748 704 aa1.28□□□□□ -2.2
SWI4YER111C HEL1P36113 551 aa1.28□□□□□ -2.2
SWI4YER111C DAD2P36162 133 aa1.28□□□□□ -2.2
SWI4YER111C SER3P40054 469 aa1.28□□□□□ -2.2
SWI4YER111C SNO3P43544 222 aa1.28□□□□□ -2.2
SWI4YER111C CUE3P53137 624 aaKnown RBP1.28□□□□□ -2.2
SWI4YER111C SLI1P53304 468 aa1.28□□□□□ -2.2
SWI4YER111C RBA50Q04418 439 aa1.28□□□□□ -2.2
SWI4YER111C PIG1Q06216 648 aa1.28□□□□□ -2.2
SWI4YER111C RTT109Q07794 436 aa1.28□□□□□ -2.2
SWI4YER111C REX4Q08237 289 aa1.28□□□□□ -2.2
SWI4YER111C ETT1Q08421 412 aaKnown RBP1.28□□□□□ -2.2
SWI4YER111C BRR1Q99177 341 aaPredicted RBP1.28□□□□□ -2.2
SWI4YER111C ISN1Q99312 450 aa1.28□□□□□ -2.2
SWI4YER111C GCN2P15442 1659 aa1.28□□□□□ -2.2
SWI4YER111C SMC4Q12267 1418 aa1.28□□□□□ -2.2
SWI4YER111C APE2P32454 952 aaKnown RBP1.28□□□□□ -2.21
SWI4YER111C KAP104P38217 918 aaKnown RBP1.28□□□□□ -2.21
SWI4YER111C SIF2P38262 535 aa1.28□□□□□ -2.21
SWI4YER111C RRP3P38712 501 aaKnown RBP1.28□□□□□ -2.21
SWI4YER111C KEL1P38853 1164 aaKnown RBP1.28□□□□□ -2.21
SWI4YER111C MNL1P38888 796 aa1.28□□□□□ -2.21
SWI4YER111C XBP1P40489 647 aa1.28□□□□□ -2.21
SWI4YER111C YIR016WP40572 265 aa1.28□□□□□ -2.21
SWI4YER111C HXT9P40885 567 aa1.28□□□□□ -2.21
SWI4YER111C GAT1P43574 510 aa1.28□□□□□ -2.21
SWI4YER111C IVY1Q04934 453 aa1.28□□□□□ -2.21
SWI4YER111C YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.28□□□□□ -2.21not detected
SWI4YER111C MED2Q12124 431 aa1.28□□□□□ -2.21
SWI4YER111C YLR111WQ12528 110 aa1.28□□□□□ -2.21
SWI4YER111C MTR10Q99189 972 aa1.28□□□□□ -2.21
SWI4YER111C SNQ2P32568 1501 aaKnown RBP1.28□□□□□ -2.21
SWI4YER111C BNR1P40450 1375 aa1.27□□□□□ -2.21
SWI4YER111C GAL4P04386 881 aa1.27□□□□□ -2.21
SWI4YER111C LEU4P06208 619 aaKnown RBP1.27□□□□□ -2.21
SWI4YER111C GPH1P06738 902 aaKnown RBP1.27□□□□□ -2.21
SWI4YER111C RAD52P06778 471 aaKnown RBP1.27□□□□□ -2.21
SWI4YER111C YAP1P19880 650 aaKnown RBP1.27□□□□□ -2.21
SWI4YER111C CNA1P23287 553 aa1.27□□□□□ -2.21
SWI4YER111C SNC1P31109 117 aa1.27□□□□□ -2.21
SWI4YER111C YNK1P36010 153 aaKnown RBP1.27□□□□□ -2.21
SWI4YER111C DUG2P38149 878 aa1.27□□□□□ -2.21
SWI4YER111C UBA4P38820 440 aa1.27□□□□□ -2.21
SWI4YER111C FET5P43561 622 aa1.27□□□□□ -2.21
SWI4YER111C PHB2P50085 310 aa1.27□□□□□ -2.21
SWI4YER111C RRP46P53256 223 aaPredicted RBP1.27□□□□□ -2.21
SWI4YER111C RPT4P53549 437 aaKnown RBP1.27□□□□□ -2.21
SWI4YER111C TOF1P53840 1238 aa1.27□□□□□ -2.21
SWI4YER111C IDP3P53982 420 aaKnown RBP1.27□□□□□ -2.21
SWI4YER111C YDR387CQ04162 555 aa1.27□□□□□ -2.21
SWI4YER111C DIC1Q06143 298 aa1.27□□□□□ -2.21
SWI4YER111C FRE7Q12333 620 aa1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms