RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W MRPL7P36519 292 aa5.11□□□□□ -1.59
UBP9YER098W KAP104P38217 918 aaKnown RBP5.11□□□□□ -1.59
UBP9YER098W TSC10P38342 320 aa5.11□□□□□ -1.59
UBP9YER098W SPL2P38839 148 aa5.11□□□□□ -1.59
UBP9YER098W HRB1P38922 454 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
UBP9YER098W ULP2P40537 1034 aaPredicted RBP5.11□□□□□ -1.59
UBP9YER098W MPS3P47069 682 aa5.11□□□□□ -1.59
UBP9YER098W MSE1P48525 536 aa5.11□□□□□ -1.59
UBP9YER098W ART5P53244 586 aaKnown RBP5.11□□□□□ -1.59
UBP9YER098W SRL4Q03085 281 aa5.11□□□□□ -1.59
UBP9YER098W YET2Q04210 160 aa5.11□□□□□ -1.59
UBP9YER098W YLR224WQ05947 369 aa5.11□□□□□ -1.59
UBP9YER098W ECM22Q05958 814 aaPredicted RBP5.11□□□□□ -1.59
UBP9YER098W YPL191CQ08930 360 aa5.11□□□□□ -1.59
UBP9YER098W YLR053CQ12026 108 aa5.11□□□□□ -1.59
UBP9YER098W RRD2Q12461 358 aa5.11□□□□□ -1.59
UBP9YER098W AI5_ALPHAQ9ZZX1 630 aa5.11□□□□□ -1.59
UBP9YER098W APE1P14904 514 aa5.11□□□□□ -1.59
UBP9YER098W PRP28P23394 588 aa5.11□□□□□ -1.59
UBP9YER098W TRM2P33753 639 aa5.11□□□□□ -1.59
UBP9YER098W UBP11P36026 717 aa5.11□□□□□ -1.59
UBP9YER098W NTR2P36118 322 aaPredicted RBP5.11□□□□□ -1.59
UBP9YER098W END3P39013 349 aa5.11□□□□□ -1.59
UBP9YER098W YIL166CP40445 542 aa5.11□□□□□ -1.59
UBP9YER098W CSM2P40465 213 aa5.11□□□□□ -1.59
UBP9YER098W PAC11P40960 533 aa5.11□□□□□ -1.59
UBP9YER098W IME4P41833 600 aa5.11□□□□□ -1.59
UBP9YER098W SSU1P41930 458 aa5.11□□□□□ -1.59
UBP9YER098W ZRG17P53735 605 aa5.11□□□□□ -1.59
UBP9YER098W VPS9P54787 451 aa5.11□□□□□ -1.59
UBP9YER098W YML037CQ03703 340 aa5.11□□□□□ -1.59
UBP9YER098W TCO89Q08921 799 aa5.11□□□□□ -1.59
UBP9YER098W SMF3Q12078 473 aaPredicted RBP5.11□□□□□ -1.59
UBP9YER098W YDL109CQ12103 647 aa5.11□□□□□ -1.59
UBP9YER098W LSO2Q3E772 92 aaKnown RBP5.11□□□□□ -1.59
UBP9YER098W PUT2P07275 575 aa5.1□□□□□ -1.59
UBP9YER098W STE12P13574 688 aa5.1□□□□□ -1.59
UBP9YER098W YAP1P19880 650 aaKnown RBP5.1□□□□□ -1.59
UBP9YER098W CDC20P26309 610 aa5.1□□□□□ -1.59
UBP9YER098W SIP2P34164 415 aaKnown RBP5.1□□□□□ -1.59
UBP9YER098W LSM12P38828 187 aaKnown RBP5.1□□□□□ -1.59
UBP9YER098W POP2P39008 433 aa5.1□□□□□ -1.59
UBP9YER098W SEO1P39709 593 aa5.1□□□□□ -1.59
UBP9YER098W UBP5P39944 805 aa5.1□□□□□ -1.59
UBP9YER098W IRC8P47046 822 aa5.1□□□□□ -1.59
UBP9YER098W LIA1P47120 325 aaKnown RBP5.1□□□□□ -1.59
UBP9YER098W YGL036WP53185 909 aaPredicted RBP5.1□□□□□ -1.59
UBP9YER098W SYO1Q07395 620 aa5.1□□□□□ -1.59
UBP9YER098W SGT1Q08446 395 aa5.1□□□□□ -1.59
UBP9YER098W PRS5Q12265 496 aaKnown RBP5.1□□□□□ -1.59
UBP9YER098W PDH1Q12428 516 aaKnown RBP5.1□□□□□ -1.59
UBP9YER098W YLR278CQ05854 1341 aa5.1□□□□□ -1.59
UBP9YER098W LRE1P25579 583 aaKnown RBP5.09□□□□□ -1.59
UBP9YER098W NTH1P32356 751 aa5.09□□□□□ -1.59
UBP9YER098W ETR1P38071 380 aa5.09□□□□□ -1.59
UBP9YER098W YBR053CP38235 358 aa5.09□□□□□ -1.59
UBP9YER098W GRE3P38715 327 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
UBP9YER098W SEC28P40509 296 aaKnown RBP5.09□□□□□ -1.59
UBP9YER098W SGN1P40561 250 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
UBP9YER098W MET28P40573 187 aa5.09□□□□□ -1.59
UBP9YER098W SSN8P47821 323 aa5.09□□□□□ -1.59
UBP9YER098W TRF5P48561 642 aaKnown RBP5.09□□□□□ -1.59
UBP9YER098W AMA1P50082 593 aa5.09□□□□□ -1.59
UBP9YER098W MUP1P50276 574 aa5.09□□□□□ -1.59
UBP9YER098W OGG1P53397 376 aaPredicted RBP5.09□□□□□ -1.59
UBP9YER098W DBP6P53734 629 aaKnown RBP5.09□□□□□ -1.59
UBP9YER098W DAK1P54838 584 aaKnown RBP5.09□□□□□ -1.59
UBP9YER098W PRO2P54885 456 aaKnown RBP5.09□□□□□ -1.59
UBP9YER098W SMD2Q06217 110 aaKnown RBP5.09□□□□□ -1.59
UBP9YER098W YEH1Q07804 573 aa5.09□□□□□ -1.59
UBP9YER098W IZH3Q07959 543 aa5.09□□□□□ -1.59
UBP9YER098W THP3Q12049 470 aaKnown RBP5.09□□□□□ -1.59
UBP9YER098W BAG7Q12128 409 aa5.09□□□□□ -1.59
UBP9YER098W CEX1Q12453 761 aa5.09□□□□□ -1.59
UBP9YER098W YML003WP0CF16 290 aa5.09□□□□□ -1.59
UBP9YER098W MGT1P26188 188 aa5.09□□□□□ -1.59
UBP9YER098W CRM1P30822 1084 aaKnown RBP5.09□□□□□ -1.59
UBP9YER098W ZIP1P31111 875 aa5.09□□□□□ -1.59
UBP9YER098W ELF1P36053 145 aa5.09□□□□□ -1.59
UBP9YER098W SDH8P38345 138 aa5.09□□□□□ -1.59
UBP9YER098W ARO9P38840 513 aaPredicted RBP5.09□□□□□ -1.59
UBP9YER098W SKN7P38889 622 aa5.09□□□□□ -1.59
UBP9YER098W YDR089WP38966 869 aa5.09□□□□□ -1.59
UBP9YER098W YJL206CP39529 758 aa5.09□□□□□ -1.59
UBP9YER098W GDI1P39958 451 aaKnown RBP5.09□□□□□ -1.59
UBP9YER098W SDS3P40505 327 aa5.09□□□□□ -1.59
UBP9YER098W SER33P40510 469 aa5.09□□□□□ -1.59
UBP9YER098W ROK1P45818 564 aaPredicted RBP5.09□□□□□ -1.59
UBP9YER098W MRK1P50873 501 aa5.09□□□□□ -1.59
UBP9YER098W MPS2P53159 387 aa5.09□□□□□ -1.59
UBP9YER098W IMO32P53219 342 aa5.09□□□□□ -1.59
UBP9YER098W COG2P53271 262 aa5.09□□□□□ -1.59
UBP9YER098W BIO4P53630 237 aa5.09□□□□□ -1.59
UBP9YER098W BNI5P53890 448 aaKnown RBP5.09□□□□□ -1.59
UBP9YER098W EFR3Q03653 782 aaKnown RBP5.09□□□□□ -1.59
UBP9YER098W YMR027WQ04371 470 aa5.09□□□□□ -1.59
UBP9YER098W URC2Q04411 772 aa5.09□□□□□ -1.59
UBP9YER098W COQ9Q05779 260 aa5.09□□□□□ -1.59
UBP9YER098W SNX3Q08826 162 aaKnown RBP5.09□□□□□ -1.59
UBP9YER098W YOR342CQ12182 319 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms