RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C ELP3Q02908 557 aaKnown RBP2.36□□□□□ -2.03
SMB1YER029C MED1Q12321 566 aa2.36□□□□□ -2.03
SMB1YER029C ARG3P05150 338 aa2.35□□□□□ -2.03
SMB1YER029C ISY1P21374 235 aaPredicted RBP2.35□□□□□ -2.03
SMB1YER029C SWD3P38123 315 aa2.35□□□□□ -2.03
SMB1YER029C MIX23P38162 196 aa2.35□□□□□ -2.03
SMB1YER029C PRE5P40302 234 aaKnown RBP2.35□□□□□ -2.03
SMB1YER029C POP1P41812 875 aa2.35□□□□□ -2.03
SMB1YER029C TFG2P41896 400 aaPredicted RBP2.35□□□□□ -2.03
SMB1YER029C YGR210CP42942 411 aa2.35□□□□□ -2.03
SMB1YER029C POP6P53218 158 aa2.35□□□□□ -2.03
SMB1YER029C ODC1Q03028 310 aa2.35□□□□□ -2.03
SMB1YER029C ADD37Q03233 198 aa2.35□□□□□ -2.03
SMB1YER029C YDR239CQ03780 787 aa2.35□□□□□ -2.03
SMB1YER029C SOV1Q04748 898 aa2.35□□□□□ -2.03
SMB1YER029C ESA1Q08649 445 aa2.35□□□□□ -2.03
SMB1YER029C ATG29Q12092 213 aa2.35□□□□□ -2.03
SMB1YER029C GRX6Q12438 231 aa2.35□□□□□ -2.03
SMB1YER029C ATP10P18496 279 aa2.34□□□□□ -2.03
SMB1YER029C LSB5P25369 354 aa2.34□□□□□ -2.03
SMB1YER029C SPB1P25582 841 aaPredicted RBP2.34□□□□□ -2.03
SMB1YER029C YCR100CP25606 316 aa2.34□□□□□ -2.03
SMB1YER029C CRM1P30822 1084 aaKnown RBP2.34□□□□□ -2.03
SMB1YER029C SPR1P32603 445 aa2.34□□□□□ -2.03
SMB1YER029C YBL059WP34224 193 aa2.34□□□□□ -2.03
SMB1YER029C THI2P38141 450 aa2.34□□□□□ -2.03
SMB1YER029C VID24P38263 362 aa2.34□□□□□ -2.03
SMB1YER029C CCT2P39076 527 aaKnown RBP2.34□□□□□ -2.03
SMB1YER029C ISC1P40015 477 aaKnown RBP2.34□□□□□ -2.03
SMB1YER029C MRP51Q02950 344 aa2.34□□□□□ -2.03
SMB1YER029C PBA1Q05778 276 aa2.34□□□□□ -2.03
SMB1YER029C BSC6Q08280 497 aa2.34□□□□□ -2.03
SMB1YER029C LEU4P06208 619 aaKnown RBP2.33□□□□□ -2.04
SMB1YER029C SEC63P14906 663 aa2.33□□□□□ -2.04
SMB1YER029C CPR4P25334 318 aa2.33□□□□□ -2.04
SMB1YER029C ARO2P28777 376 aaKnown RBP2.33□□□□□ -2.04
SMB1YER029C GPI10P30777 616 aa2.33□□□□□ -2.04
SMB1YER029C YEL045CP32616 141 aa2.33□□□□□ -2.04
SMB1YER029C PMT1P33775 817 aa2.33□□□□□ -2.04
SMB1YER029C CMC1P36064 111 aa2.33□□□□□ -2.04
SMB1YER029C YCR041WP37265 110 aa2.33□□□□□ -2.04
SMB1YER029C YBR137WP38276 179 aa2.33□□□□□ -2.04
SMB1YER029C HXT14P42833 540 aa2.33□□□□□ -2.04
SMB1YER029C IRC6P43615 237 aa2.33□□□□□ -2.04
SMB1YER029C BTN2P53286 410 aa2.33□□□□□ -2.04
SMB1YER029C IBD2P53892 351 aa2.33□□□□□ -2.04
SMB1YER029C RQC1Q05468 723 aaKnown RBP2.33□□□□□ -2.04
SMB1YER029C HEL2Q05580 639 aaKnown RBP2.33□□□□□ -2.04
SMB1YER029C HRT3Q12347 344 aa2.33□□□□□ -2.04
SMB1YER029C HHF1P02309 103 aaKnown RBP2.32□□□□□ -2.04
SMB1YER029C RHO2P06781 192 aa2.32□□□□□ -2.04
SMB1YER029C CLN3P13365 580 aa2.32□□□□□ -2.04
SMB1YER029C CDC60P26637 1090 aaKnown RBP2.32□□□□□ -2.04
SMB1YER029C ITR1P30605 584 aa2.32□□□□□ -2.04
SMB1YER029C NIP100P33420 868 aa2.32□□□□□ -2.04
SMB1YER029C RSM22P36056 628 aa2.32□□□□□ -2.04
SMB1YER029C NAT2P37293 288 aa2.32□□□□□ -2.04
SMB1YER029C NDT80P38830 627 aa2.32□□□□□ -2.04
SMB1YER029C OST1P41543 476 aaKnown RBP2.32□□□□□ -2.04
SMB1YER029C YGR149WP48236 432 aa2.32□□□□□ -2.04
SMB1YER029C TOF1P53840 1238 aa2.32□□□□□ -2.04
SMB1YER029C RPT6Q01939 405 aaKnown RBP2.32□□□□□ -2.04
SMB1YER029C PNG1Q02890 363 aa2.32□□□□□ -2.04
SMB1YER029C RRN11Q04712 507 aa2.32□□□□□ -2.04
SMB1YER029C MHR1Q06630 226 aa2.32□□□□□ -2.04
SMB1YER029C TSR1Q07381 788 aaKnown RBP2.32□□□□□ -2.04
SMB1YER029C RBD2Q12270 262 aa2.32□□□□□ -2.04
SMB1YER029C YLR278CQ05854 1341 aa2.32□□□□□ -2.04
SMB1YER029C YAR066WP0CX18 203 aa2.31□□□□□ -2.04
SMB1YER029C YHR214WP0CX19 203 aa2.31□□□□□ -2.04
SMB1YER029C SAM1P10659 382 aaKnown RBP2.31□□□□□ -2.04
SMB1YER029C SAM2P19358 384 aaKnown RBP2.31□□□□□ -2.04
SMB1YER029C SNT1P25357 1226 aa2.31□□□□□ -2.04
SMB1YER029C TIP1P27654 210 aaPredicted RBP2.31□□□□□ -2.04
SMB1YER029C RAD14P28519 371 aa2.31□□□□□ -2.04
SMB1YER029C DEG1P31115 442 aaKnown RBP2.31□□□□□ -2.04
SMB1YER029C HXT1P32465 570 aa2.31□□□□□ -2.04
SMB1YER029C HXT3P32466 567 aaKnown RBP2.31□□□□□ -2.04
SMB1YER029C ECM25P32525 599 aa2.31□□□□□ -2.04
SMB1YER029C GYP6P32806 458 aa2.31□□□□□ -2.04
SMB1YER029C PAD1P33751 242 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
SMB1YER029C MST28P39552 234 aa2.31□□□□□ -2.04
SMB1YER029C ESL1P40456 1118 aa2.31□□□□□ -2.04
SMB1YER029C YIP1P53039 248 aa2.31□□□□□ -2.04
SMB1YER029C SYF1Q04048 859 aaPredicted RBP2.31□□□□□ -2.04
SMB1YER029C BUD21Q08492 214 aaPredicted RBP2.31□□□□□ -2.04
SMB1YER029C YPL199CQ08954 240 aa2.31□□□□□ -2.04
SMB1YER029C RIM20Q12033 661 aa2.31□□□□□ -2.04
SMB1YER029C PGA3Q12746 312 aaKnown RBP2.31□□□□□ -2.04
SMB1YER029C RAD61Q99359 647 aa2.31□□□□□ -2.04
SMB1YER029C YML133CQ03099 1374 aa2.31□□□□□ -2.04
SMB1YER029C YLL067CQ07888 1374 aa2.31□□□□□ -2.04
SMB1YER029C YLL066CQ99208 1374 aa2.31□□□□□ -2.04
SMB1YER029C ADH2P00331 348 aaKnown RBP2.3□□□□□ -2.04
SMB1YER029C SUP35P05453 685 aaKnown RBP2.3□□□□□ -2.04
SMB1YER029C RIP1P08067 215 aa2.3□□□□□ -2.04
SMB1YER029C ROX1P25042 368 aa2.3□□□□□ -2.04
SMB1YER029C AFG1P32317 509 aa2.3□□□□□ -2.04
SMB1YER029C PRP21P32524 280 aaPredicted RBP2.3□□□□□ -2.04
SMB1YER029C CBP4P37267 147 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms