RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	BSC2	Q05611	235 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	BCP1	Q06338	283 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	SNX3	Q08826	162 aa	Known RBP	6.22	□□□□□ -1.41
VMA3	YEL027W	SLF1	Q12034	447 aa	Known RBP	6.22	□□□□□ -1.41
VMA3	YEL027W	DIN7	Q12086	430 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	NMD4	Q12129	218 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	HUA2	Q12134	243 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	HAL9	Q12180	1030 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	YLL054C	Q12244	843 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	ATP6	P00854	259 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	RPS21A	P0C0V8	87 aa	Known RBP	6.21	□□□□□ -1.42
VMA3	YEL027W	RPS4A	P0CX35	261 aa	Known RBP	6.21	□□□□□ -1.42
VMA3	YEL027W	RPS4B	P0CX36	261 aa	Known RBP	6.21	□□□□□ -1.42
VMA3	YEL027W	MRP13	P12686	339 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	CMP2	P14747	604 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	PHO81	P17442	1178 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	FUR1	P18562	216 aa	Known RBP	6.21	□□□□□ -1.42
VMA3	YEL027W	HOP1	P20050	605 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	CCA1	P21269	546 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	PTP1	P25044	335 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	SPS22	P25380	463 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	CSM1	P25651	190 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	AAR2	P32357	355 aa	Predicted RBP	6.21	□□□□□ -1.42
VMA3	YEL027W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	6.21	□□□□□ -1.42	not detected
VMA3	YEL027W	ATO2	P32907	282 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	TAF14	P35189	244 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	VPS21	P36017	210 aa	Known RBP	6.21	□□□□□ -1.42
VMA3	YEL027W	RGA1	P39083	1007 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	ALG5	P40350	334 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	APQ12	P40532	138 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	MNT3	P40549	630 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	IMA5	P40884	581 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	AIM22	P47051	409 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	DIA3	P52290	468 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	ERG26	P53199	349 aa	Known RBP	6.21	□□□□□ -1.42
VMA3	YEL027W	GOR1	P53839	350 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	CSL4	P53859	292 aa	Predicted RBP	6.21	□□□□□ -1.42
VMA3	YEL027W	RPM2	Q02773	1202 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	MMT1	Q03218	510 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	YDR476C	Q03362	224 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	MTQ2	Q03920	221 aa	Predicted RBP	6.21	□□□□□ -1.42
VMA3	YEL027W	MUS81	Q04149	632 aa	Predicted RBP	6.21	□□□□□ -1.42
VMA3	YEL027W	DYN3	Q04949	312 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	YOL073C	Q08232	322 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	YOR114W	Q12219	294 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	JLP1	Q12358	412 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	STT4	P37297	1900 aa		6.21	□□□□□ -1.42
VMA3	YEL027W	TPK2	P06245	380 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	MST1	P07236	462 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	GCD2	P12754	651 aa	Predicted RBP	6.2	□□□□□ -1.42
VMA3	YEL027W	KIN2	P13186	1147 aa	Known RBP	6.2	□□□□□ -1.42
VMA3	YEL027W	ATP7	P30902	174 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	ZUO1	P32527	433 aa	Known RBP	6.2	□□□□□ -1.42
VMA3	YEL027W	HES1	P35843	434 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	FMP46	P36141	133 aa	Known RBP	6.2	□□□□□ -1.42
VMA3	YEL027W	RRN10	P38204	145 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	IST2	P38250	946 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	COS111	P38308	924 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	MET30	P39014	640 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	MAD2	P40958	196 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	AZF1	P41696	914 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	SEC26	P41810	973 aa	Known RBP	6.2	□□□□□ -1.42
VMA3	YEL027W	YJL049W	P47048	450 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	RIM21	P48565	533 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	ACL4	Q03771	387 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	HSP31	Q04432	237 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	YHC1	Q05900	231 aa	Known RBP	6.2	□□□□□ -1.42
VMA3	YEL027W	GGA1	Q06336	557 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	PSR1	Q07800	427 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	YLR030W	Q07967	263 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	GPN2	Q08726	347 aa	Predicted RBP	6.2	□□□□□ -1.42
VMA3	YEL027W	YOR389W	Q08912	624 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	GUP2	Q08929	609 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	YPL278C	Q08990	100 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	RPN5	Q12250	445 aa	Known RBP	6.2	□□□□□ -1.42
VMA3	YEL027W	BMT6	Q12291	365 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	NTO1	Q12311	748 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	YLR111W	Q12528	110 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	LAG2	Q92325	660 aa		6.2	□□□□□ -1.42
VMA3	YEL027W	RAS2	P01120	322 aa	Known RBP	6.19	□□□□□ -1.42
VMA3	YEL027W	LEU4	P06208	619 aa	Known RBP	6.19	□□□□□ -1.42
VMA3	YEL027W	TY2A-LR1	P0C2J4	438 aa		6.19	□□□□□ -1.42
VMA3	YEL027W	TY2A-F	P0CX61	438 aa		6.19	□□□□□ -1.42
VMA3	YEL027W	TY2A-GR2	P0CX62	438 aa		6.19	□□□□□ -1.42
VMA3	YEL027W	KAR1	P11927	433 aa		6.19	□□□□□ -1.42
VMA3	YEL027W	TOP3	P13099	656 aa		6.19	□□□□□ -1.42
VMA3	YEL027W	PRI2	P20457	528 aa		6.19	□□□□□ -1.42
VMA3	YEL027W	MSB1	P21339	1137 aa	Known RBP	6.19	□□□□□ -1.42
VMA3	YEL027W	SAN1	P22470	610 aa		6.19	□□□□□ -1.42
VMA3	YEL027W	YCR006C	P25350	157 aa		6.19	□□□□□ -1.42
VMA3	YEL027W	TY2A-C	P25383	438 aa		6.19	□□□□□ -1.42
VMA3	YEL027W	RAD51	P25454	400 aa		6.19	□□□□□ -1.42
VMA3	YEL027W	BUB3	P26449	341 aa		6.19	□□□□□ -1.42
VMA3	YEL027W	ADE1	P27616	306 aa		6.19	□□□□□ -1.42
VMA3	YEL027W	MRPL17	P36528	281 aa		6.19	□□□□□ -1.42
VMA3	YEL027W	CBP4	P37267	147 aa		6.19	□□□□□ -1.42
VMA3	YEL027W	ATG7	P38862	630 aa		6.19	□□□□□ -1.42
VMA3	YEL027W	PLB1	P39105	664 aa		6.19	□□□□□ -1.42
VMA3	YEL027W	HPM1	P40481	377 aa		6.19	□□□□□ -1.42
VMA3	YEL027W	GAB1	P41733	394 aa		6.19	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms