RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C SGN1P40561 250 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
CDC48YDL126C IMD3P50095 523 aaKnown RBP4.46□□□□□ -1.7
CDC48YDL126C IMA1P53051 589 aa4.46□□□□□ -1.7
CDC48YDL126C TMA20P89886 181 aaPredicted RBP4.46□□□□□ -1.7
CDC48YDL126C RPM2Q02773 1202 aa4.46□□□□□ -1.7
CDC48YDL126C SSY1Q03770 852 aa4.46□□□□□ -1.7
CDC48YDL126C SOV1Q04748 898 aa4.46□□□□□ -1.7
CDC48YDL126C YLR177WQ06251 628 aa4.46□□□□□ -1.7
CDC48YDL126C DTD1Q07648 150 aaKnown RBP4.46□□□□□ -1.7
CDC48YDL126C NOP12Q08208 459 aaKnown RBP4.46□□□□□ -1.7
CDC48YDL126C PAB1P04147 577 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7 RIP-Chip
CDC48YDL126C STE12P13574 688 aa4.45□□□□□ -1.7
CDC48YDL126C CHS2P14180 963 aa4.45□□□□□ -1.7
CDC48YDL126C POL3P15436 1097 aa4.45□□□□□ -1.7
CDC48YDL126C HXT1P32465 570 aa4.45□□□□□ -1.7
CDC48YDL126C LOT5P34234 306 aa4.45□□□□□ -1.7
CDC48YDL126C COS111P38308 924 aa4.45□□□□□ -1.7
CDC48YDL126C PTC7P38797 343 aa4.45□□□□□ -1.7
CDC48YDL126C RTC3P38804 111 aaPredicted RBP4.45□□□□□ -1.7
CDC48YDL126C TDA11P38854 504 aa4.45□□□□□ -1.7
CDC48YDL126C SSP120P39931 234 aaKnown RBP4.45□□□□□ -1.7
CDC48YDL126C YEL025CP39991 1188 aa4.45□□□□□ -1.7
CDC48YDL126C YNL195CP40168 261 aa4.45□□□□□ -1.7
CDC48YDL126C ATF1P40353 525 aa4.45□□□□□ -1.7
CDC48YDL126C TMA22P47089 198 aaPredicted RBP4.45□□□□□ -1.7
CDC48YDL126C SLD5Q03406 294 aa4.45□□□□□ -1.7
CDC48YDL126C DUS4Q06063 367 aa4.45□□□□□ -1.7
CDC48YDL126C GMC2Q06201 188 aa4.45□□□□□ -1.7
CDC48YDL126C LOT6Q07923 191 aa4.45□□□□□ -1.7
CDC48YDL126C DAS2Q12084 232 aa4.45□□□□□ -1.7
CDC48YDL126C YDL177CQ12257 170 aa4.45□□□□□ -1.7
CDC48YDL126C PHO5P00635 467 aa4.45□□□□□ -1.7
CDC48YDL126C URA3P03962 267 aa4.45□□□□□ -1.7
CDC48YDL126C APA2P22108 325 aa4.45□□□□□ -1.7
CDC48YDL126C AIM26P32858 118 aa4.45□□□□□ -1.7
CDC48YDL126C TPO5P36029 618 aa4.45□□□□□ -1.7
CDC48YDL126C CUE2P36075 443 aaKnown RBP4.45□□□□□ -1.7
CDC48YDL126C TVP38P36164 337 aa4.45□□□□□ -1.7
CDC48YDL126C YBR139WP38109 508 aa4.45□□□□□ -1.7
CDC48YDL126C MTG2P38860 518 aa4.45□□□□□ -1.7
CDC48YDL126C BIT61P47041 543 aa4.45□□□□□ -1.7
CDC48YDL126C HSH155P49955 971 aaKnown RBP4.45□□□□□ -1.7
CDC48YDL126C TAM41P53230 385 aa4.45□□□□□ -1.7
CDC48YDL126C YGR111WP53265 400 aa4.45□□□□□ -1.7
CDC48YDL126C BSC5P53755 489 aa4.45□□□□□ -1.7
CDC48YDL126C INN1P53901 409 aa4.45□□□□□ -1.7
CDC48YDL126C BET4Q00618 327 aa4.45□□□□□ -1.7
CDC48YDL126C LGE1Q02796 332 aaKnown RBP4.45□□□□□ -1.7
CDC48YDL126C EMI2Q04409 500 aaKnown RBP4.45□□□□□ -1.7
CDC48YDL126C ROY1Q04847 553 aa4.45□□□□□ -1.7
CDC48YDL126C TRI1Q05024 226 aa4.45□□□□□ -1.7
CDC48YDL126C YLR456WQ06199 204 aa4.45□□□□□ -1.7
CDC48YDL126C DIS3Q08162 1001 aaKnown RBP4.45□□□□□ -1.7
CDC48YDL126C FMP40Q08968 688 aaPredicted RBP4.45□□□□□ -1.7
CDC48YDL126C LAS17Q12446 633 aa4.45□□□□□ -1.7
CDC48YDL126C HRP1Q99383 534 aaKnown RBP4.45□□□□□ -1.7
CDC48YDL126C PDE2P06776 526 aa4.44□□□□□ -1.7
CDC48YDL126C CMD1P06787 147 aaKnown RBP4.44□□□□□ -1.7
CDC48YDL126C UNG1P12887 359 aa4.44□□□□□ -1.7
CDC48YDL126C SEC63P14906 663 aa4.44□□□□□ -1.7
CDC48YDL126C FRS1P15624 595 aaKnown RBP4.44□□□□□ -1.7
CDC48YDL126C CNA1P23287 553 aa4.44□□□□□ -1.7
CDC48YDL126C YCR061WP25639 631 aa4.44□□□□□ -1.7
CDC48YDL126C HEK2P38199 381 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
CDC48YDL126C SMF2P38778 549 aa4.44□□□□□ -1.7
CDC48YDL126C YHR054CP38780 354 aa4.44□□□□□ -1.7
CDC48YDL126C ZRG8P40021 1076 aa4.44□□□□□ -1.7
CDC48YDL126C UBP7P40453 1071 aa4.44□□□□□ -1.7
CDC48YDL126C BST1P43571 1029 aa4.44□□□□□ -1.7
CDC48YDL126C ACS1Q01574 713 aa4.44□□□□□ -1.7
CDC48YDL126C SPC2Q04969 178 aa4.44□□□□□ -1.7
CDC48YDL126C DCS1Q06151 350 aa4.44□□□□□ -1.7
CDC48YDL126C YLR122CQ12312 125 aa4.44□□□□□ -1.7
CDC48YDL126C SNU23Q12368 194 aaPredicted RBP4.44□□□□□ -1.7
CDC48YDL126C HXK2P04807 486 aaKnown RBP4.44□□□□□ -1.7
CDC48YDL126C PUT4P15380 627 aa4.44□□□□□ -1.7
CDC48YDL126C URA4P20051 364 aa4.44□□□□□ -1.7
CDC48YDL126C VPS34P22543 875 aa4.44□□□□□ -1.7
CDC48YDL126C CPR2P23285 205 aa4.44□□□□□ -1.7
CDC48YDL126C PTP1P25044 335 aa4.44□□□□□ -1.7
CDC48YDL126C MSS1P32559 526 aaPredicted RBP4.44□□□□□ -1.7
CDC48YDL126C MUD1P32605 298 aaKnown RBP4.44□□□□□ -1.7
CDC48YDL126C COT1P32798 439 aa4.44□□□□□ -1.7
CDC48YDL126C YPT52P36018 234 aaKnown RBP4.44□□□□□ -1.7
CDC48YDL126C PCF11P39081 626 aaPredicted RBP4.44□□□□□ -1.7
CDC48YDL126C FLC2P39719 783 aa4.44□□□□□ -1.7
CDC48YDL126C MTW1P39731 289 aa4.44□□□□□ -1.7
CDC48YDL126C SAW1P39735 261 aa4.44□□□□□ -1.7
CDC48YDL126C GET2P40056 285 aa4.44□□□□□ -1.7
CDC48YDL126C UTP25P40498 721 aaKnown RBP4.44□□□□□ -1.7
CDC48YDL126C KTR6P54070 446 aa4.44□□□□□ -1.7
CDC48YDL126C NGL2Q03264 515 aaKnown RBP4.44□□□□□ -1.7
CDC48YDL126C PDR8Q06149 701 aa4.44□□□□□ -1.7
CDC48YDL126C BOP2Q06150 570 aa4.44□□□□□ -1.7
CDC48YDL126C UIP4Q08926 304 aa4.44□□□□□ -1.7
CDC48YDL126C ULA1Q12059 462 aa4.44□□□□□ -1.7
CDC48YDL126C CDC8P00572 216 aa4.43□□□□□ -1.7
CDC48YDL126C MDH1P17505 334 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
CDC48YDL126C DPB2P24482 689 aaPredicted RBP4.43□□□□□ -1.7
CDC48YDL126C PHO11P35842 467 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms