RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	ERG1	P32476	496 aa	Known RBP	5.62	□□□□□ -1.51
SIR2	YDL042C	TMT1	P32643	299 aa		5.62	□□□□□ -1.51
SIR2	YDL042C	SSU1	P41930	458 aa		5.62	□□□□□ -1.51
SIR2	YDL042C	DLD2	P46681	530 aa	Known RBP	5.62	□□□□□ -1.51
SIR2	YDL042C	YGL108C	P53139	140 aa		5.62	□□□□□ -1.51
SIR2	YDL042C	YEH2	Q07950	538 aa		5.62	□□□□□ -1.51
SIR2	YDL042C	ERP4	Q12450	207 aa		5.62	□□□□□ -1.51
SIR2	YDL042C	CSR2	Q12734	1121 aa		5.62	□□□□□ -1.51
SIR2	YDL042C	YRF1-4	O13559	1382 aa		5.61	□□□□□ -1.51
SIR2	YDL042C	APE1	P14904	514 aa		5.61	□□□□□ -1.51
SIR2	YDL042C	SPB1	P25582	841 aa	Predicted RBP	5.61	□□□□□ -1.51
SIR2	YDL042C	YNK1	P36010	153 aa	Known RBP	5.61	□□□□□ -1.51
SIR2	YDL042C	CSM2	P40465	213 aa		5.61	□□□□□ -1.51
SIR2	YDL042C	MNP1	P53163	194 aa	Predicted RBP	5.61	□□□□□ -1.51
SIR2	YDL042C	REC107	P21651	314 aa		5.6	□□□□□ -1.51
SIR2	YDL042C	SEC62	P21825	274 aa		5.6	□□□□□ -1.51
SIR2	YDL042C	PPH22	P23595	377 aa		5.6	□□□□□ -1.51
SIR2	YDL042C	RAD14	P28519	371 aa		5.6	□□□□□ -1.51
SIR2	YDL042C	AFG1	P32317	509 aa		5.6	□□□□□ -1.51
SIR2	YDL042C	UTR4	P32626	227 aa		5.6	□□□□□ -1.51
SIR2	YDL042C	TRS65	P32893	560 aa		5.6	□□□□□ -1.51
SIR2	YDL042C	ECM15	P35195	104 aa		5.6	□□□□□ -1.51
SIR2	YDL042C	OSH3	P38713	996 aa	Known RBP	5.6	□□□□□ -1.51
SIR2	YDL042C	VMR1	P38735	1592 aa		5.6	□□□□□ -1.51
SIR2	YDL042C	CLC1	P17891	233 aa		5.59	□□□□□ -1.51
SIR2	YDL042C	GLN3	P18494	730 aa		5.59	□□□□□ -1.51
SIR2	YDL042C	DBF4	P32325	704 aa		5.59	□□□□□ -1.51
SIR2	YDL042C	HCS1	P34243	683 aa		5.59	□□□□□ -1.51
SIR2	YDL042C	YTA12	P40341	825 aa		5.59	□□□□□ -1.51
SIR2	YDL042C	YGR149W	P48236	432 aa		5.59	□□□□□ -1.51
SIR2	YDL042C	IVY1	Q04934	453 aa		5.59	□□□□□ -1.51
SIR2	YDL042C	NUP188	P52593	1655 aa	Known RBP	5.59	□□□□□ -1.51
SIR2	YDL042C	MES1	P00958	751 aa	Known RBP	5.59	□□□□□ -1.52
SIR2	YDL042C	YND1	P40009	630 aa		5.59	□□□□□ -1.52
SIR2	YDL042C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	5.59	□□□□□ -1.52	not detected
SIR2	YDL042C	OCA1	P50946	238 aa	Predicted RBP	5.59	□□□□□ -1.52
SIR2	YDL042C	CUL3	P53202	744 aa		5.59	□□□□□ -1.52
SIR2	YDL042C	SLD5	Q03406	294 aa		5.59	□□□□□ -1.52
SIR2	YDL042C	ARX1	Q03862	593 aa	Known RBP	5.59	□□□□□ -1.52
SIR2	YDL042C	YDR131C	Q03899	556 aa		5.59	□□□□□ -1.52
SIR2	YDL042C	YMR087W	Q04299	284 aa		5.59	□□□□□ -1.52
SIR2	YDL042C	RBA50	Q04418	439 aa		5.59	□□□□□ -1.52
SIR2	YDL042C	PHO92	Q06390	306 aa		5.59	□□□□□ -1.52
SIR2	YDL042C	YAP7	Q08182	245 aa		5.59	□□□□□ -1.52
SIR2	YDL042C	ADK2	P26364	225 aa		5.58	□□□□□ -1.52
SIR2	YDL042C	TUL1	P36096	758 aa		5.58	□□□□□ -1.52
SIR2	YDL042C	BZZ1	P38822	633 aa		5.58	□□□□□ -1.52
SIR2	YDL042C	KEL1	P38853	1164 aa	Known RBP	5.58	□□□□□ -1.52
SIR2	YDL042C	VMA13	P41807	478 aa	Known RBP	5.58	□□□□□ -1.52
SIR2	YDL042C	POP1	P41812	875 aa		5.58	□□□□□ -1.52
SIR2	YDL042C	SAD1	P43589	448 aa		5.58	□□□□□ -1.52
SIR2	YDL042C	RHO2	P06781	192 aa		5.57	□□□□□ -1.52
SIR2	YDL042C	YCR007C	P25354	239 aa		5.57	□□□□□ -1.52
SIR2	YDL042C	YCR051W	P25631	222 aa		5.57	□□□□□ -1.52
SIR2	YDL042C	IDH2	P28241	369 aa	Known RBP	5.57	□□□□□ -1.52
SIR2	YDL042C	STB6	P36085	766 aa		5.57	□□□□□ -1.52
SIR2	YDL042C	YMR147W	P40218	223 aa	Known RBP	5.57	□□□□□ -1.52
SIR2	YDL042C	NUP53	Q03790	475 aa		5.57	□□□□□ -1.52
SIR2	YDL042C	NRT1	Q08485	598 aa		5.57	□□□□□ -1.52
SIR2	YDL042C	SPS4	P09937	338 aa		5.56	□□□□□ -1.52
SIR2	YDL042C	GCS1	P35197	352 aa		5.56	□□□□□ -1.52
SIR2	YDL042C	YJL068C	P40363	299 aa		5.56	□□□□□ -1.52
SIR2	YDL042C	GPI1	P53306	609 aa		5.56	□□□□□ -1.52
SIR2	YDL042C	LSC1	P53598	329 aa	Known RBP	5.56	□□□□□ -1.52
SIR2	YDL042C	ATP11	P32453	318 aa		5.56	□□□□□ -1.52
SIR2	YDL042C	RML2	P32611	393 aa		5.56	□□□□□ -1.52
SIR2	YDL042C	SYG1	P40528	902 aa		5.56	□□□□□ -1.52
SIR2	YDL042C	ROY1	Q04847	553 aa		5.56	□□□□□ -1.52
SIR2	YDL042C	BNA5	Q05979	453 aa		5.56	□□□□□ -1.52
SIR2	YDL042C	CFT2	Q12102	859 aa	Predicted RBP	5.56	□□□□□ -1.52
SIR2	YDL042C	ISN1	Q99312	450 aa		5.56	□□□□□ -1.52
SIR2	YDL042C	IML1	P47170	1584 aa		5.55	□□□□□ -1.52
SIR2	YDL042C	GLK1	P17709	500 aa	Known RBP	5.55	□□□□□ -1.52
SIR2	YDL042C	YIM1	P28625	365 aa		5.55	□□□□□ -1.52
SIR2	YDL042C	RIM2	P38127	377 aa		5.55	□□□□□ -1.52
SIR2	YDL042C	VPS52	P39904	641 aa		5.55	□□□□□ -1.52
SIR2	YDL042C	DIM1	P41819	318 aa	Known RBP	5.55	□□□□□ -1.52
SIR2	YDL042C	BNI5	P53890	448 aa	Known RBP	5.55	□□□□□ -1.52
SIR2	YDL042C	RMT2	Q03305	412 aa		5.55	□□□□□ -1.52
SIR2	YDL042C	SYO1	Q07395	620 aa		5.55	□□□□□ -1.52
SIR2	YDL042C	ISA2	Q12425	185 aa		5.55	□□□□□ -1.52
SIR2	YDL042C	PDR5	P33302	1511 aa	Known RBP	5.54	□□□□□ -1.52
SIR2	YDL042C	FUN19	P28003	413 aa	Predicted RBP	5.54	□□□□□ -1.52
SIR2	YDL042C	VMA8	P32610	256 aa	Known RBP	5.54	□□□□□ -1.52
SIR2	YDL042C	FRE1	P32791	686 aa		5.54	□□□□□ -1.52
SIR2	YDL042C	THI2	P38141	450 aa		5.54	□□□□□ -1.52
SIR2	YDL042C	URB2	P47108	1174 aa		5.54	□□□□□ -1.52
SIR2	YDL042C	RMD9	P53140	646 aa	Known RBP	5.54	□□□□□ -1.52
SIR2	YDL042C	ERB1	Q04660	807 aa	Known RBP	5.54	□□□□□ -1.52
SIR2	YDL042C	SIL1	Q08199	421 aa		5.54	□□□□□ -1.52
SIR2	YDL042C	SMC6	Q12749	1114 aa		5.54	□□□□□ -1.52
SIR2	YDL042C	AFI1	Q99222	893 aa		5.54	□□□□□ -1.52
SIR2	YDL042C	AMD1	P15274	810 aa	Known RBP	5.53	□□□□□ -1.52
SIR2	YDL042C	CDC23	P16522	626 aa		5.53	□□□□□ -1.52
SIR2	YDL042C	ATP10	P18496	279 aa		5.53	□□□□□ -1.52
SIR2	YDL042C	PPZ1	P26570	692 aa		5.53	□□□□□ -1.52
SIR2	YDL042C	PXA2	P34230	853 aa		5.53	□□□□□ -1.52
SIR2	YDL042C	MRPL51	Q06090	140 aa	Predicted RBP	5.53	□□□□□ -1.52
SIR2	YDL042C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	5.53	□□□□□ -1.52	not detected
SIR2	YDL042C	LSP1	Q12230	341 aa	Known RBP	5.53	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms