RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeast

Gene PRE7, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRE7	YBL041W	HEM15	P16622	393 aa		4.92	□□□□□ -1.62
PRE7	YBL041W	NTH1	P32356	751 aa		4.92	□□□□□ -1.62
PRE7	YBL041W	HOG1	P32485	435 aa		4.92	□□□□□ -1.62
PRE7	YBL041W	BEM3	P32873	1128 aa		4.92	□□□□□ -1.62
PRE7	YBL041W	SKN1	P33336	771 aa		4.92	□□□□□ -1.62
PRE7	YBL041W	TAF14	P35189	244 aa		4.92	□□□□□ -1.62
PRE7	YBL041W	YHR182W	P38870	785 aa		4.92	□□□□□ -1.62
PRE7	YBL041W	LYS1	P38998	373 aa	RIP-Chip data	4.92	□□□□□ -1.62	not detected
PRE7	YBL041W	HAT2	P39984	401 aa		4.92	□□□□□ -1.62
PRE7	YBL041W	MEP1	P40260	492 aa		4.92	□□□□□ -1.62
PRE7	YBL041W	CFD1	P40558	293 aa		4.92	□□□□□ -1.62
PRE7	YBL041W	INA22	P40576	216 aa		4.92	□□□□□ -1.62
PRE7	YBL041W	PFA3	P42836	336 aa		4.92	□□□□□ -1.62
PRE7	YBL041W	YNL320W	P42840	284 aa		4.92	□□□□□ -1.62
PRE7	YBL041W	ATG36	P46983	293 aa		4.92	□□□□□ -1.62
PRE7	YBL041W	SLT2	Q00772	484 aa		4.92	□□□□□ -1.62
PRE7	YBL041W	ADE13	Q05911	482 aa	Known RBP	4.92	□□□□□ -1.62
PRE7	YBL041W	RSC3	Q06639	885 aa		4.92	□□□□□ -1.62
PRE7	YBL041W	YOR389W	Q08912	624 aa		4.92	□□□□□ -1.62
PRE7	YBL041W	YPL278C	Q08990	100 aa		4.92	□□□□□ -1.62
PRE7	YBL041W	RRP12	Q12754	1228 aa	Known RBP	4.92	□□□□□ -1.62
PRE7	YBL041W	RAD1	P06777	1100 aa		4.91	□□□□□ -1.62
PRE7	YBL041W	ILS1	P09436	1072 aa	Known RBP	4.91	□□□□□ -1.62
PRE7	YBL041W	RIM1	P32445	135 aa	Known RBP	4.91	□□□□□ -1.62
PRE7	YBL041W	EMC3	P36039	253 aa		4.91	□□□□□ -1.62
PRE7	YBL041W	RPC37	P36121	282 aa		4.91	□□□□□ -1.62
PRE7	YBL041W	OLA1	P38219	394 aa	Known RBP	4.91	□□□□□ -1.62
PRE7	YBL041W	UTP18	P40362	594 aa	Predicted RBP	4.91	□□□□□ -1.62
PRE7	YBL041W	SEC28	P40509	296 aa	Known RBP	4.91	□□□□□ -1.62
PRE7	YBL041W	GAT1	P43574	510 aa		4.91	□□□□□ -1.62
PRE7	YBL041W	ARE2	P53629	642 aa	Known RBP	4.91	□□□□□ -1.62
PRE7	YBL041W	CSL4	P53859	292 aa	Predicted RBP	4.91	□□□□□ -1.62
PRE7	YBL041W	RSM10	Q03201	203 aa		4.91	□□□□□ -1.62
PRE7	YBL041W	CTK1	Q03957	528 aa	Known RBP	4.91	□□□□□ -1.62
PRE7	YBL041W	TRM12	Q04235	462 aa		4.91	□□□□□ -1.62
PRE7	YBL041W	YLR030W	Q07967	263 aa		4.91	□□□□□ -1.62
PRE7	YBL041W	DIN7	Q12086	430 aa		4.91	□□□□□ -1.62
PRE7	YBL041W	ICT1	Q12385	394 aa		4.91	□□□□□ -1.62
PRE7	YBL041W	HBN1	Q96VH4	193 aa		4.91	□□□□□ -1.62
PRE7	YBL041W	FAS1	P07149	2051 aa	Known RBP	4.91	□□□□□ -1.62
PRE7	YBL041W	STE2	D6VTK4	431 aa		4.9	□□□□□ -1.63
PRE7	YBL041W	PHO5	P00635	467 aa		4.9	□□□□□ -1.63
PRE7	YBL041W	PET111	P08468	800 aa		4.9	□□□□□ -1.63
PRE7	YBL041W	TOP3	P13099	656 aa		4.9	□□□□□ -1.63
PRE7	YBL041W	MET8	P15807	274 aa		4.9	□□□□□ -1.63
PRE7	YBL041W	FUR1	P18562	216 aa	Known RBP	4.9	□□□□□ -1.63
PRE7	YBL041W	CLB1	P24868	471 aa		4.9	□□□□□ -1.63
PRE7	YBL041W	PTP1	P25044	335 aa		4.9	□□□□□ -1.63
PRE7	YBL041W	ATP11	P32453	318 aa		4.9	□□□□□ -1.63
PRE7	YBL041W	PET309	P32522	965 aa	Predicted RBP	4.9	□□□□□ -1.63
PRE7	YBL041W	MGM101	P32787	269 aa	Known RBP	4.9	□□□□□ -1.63
PRE7	YBL041W	YJL163C	P46996	555 aa		4.9	□□□□□ -1.63
PRE7	YBL041W	COS12	P53053	380 aa		4.9	□□□□□ -1.63
PRE7	YBL041W	SHR3	Q02774	210 aa		4.9	□□□□□ -1.63
PRE7	YBL041W	GPR1	Q12361	961 aa		4.9	□□□□□ -1.63
PRE7	YBL041W	LAG2	Q92325	660 aa		4.9	□□□□□ -1.63
PRE7	YBL041W	NOP14	Q99207	810 aa	Known RBP	4.9	□□□□□ -1.63
PRE7	YBL041W	HRP1	Q99383	534 aa	Known RBP	4.9	□□□□□ -1.63
PRE7	YBL041W	CDC8	P00572	216 aa		4.89	□□□□□ -1.63
PRE7	YBL041W	RSR1	P13856	272 aa		4.89	□□□□□ -1.63
PRE7	YBL041W	PRP16	P15938	1071 aa	Predicted RBP	4.89	□□□□□ -1.63
PRE7	YBL041W	TRX2	P22803	104 aa	Known RBP	4.89	□□□□□ -1.63
PRE7	YBL041W	YCR006C	P25350	157 aa		4.89	□□□□□ -1.63
PRE7	YBL041W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
PRE7	YBL041W	SKT5	P34226	696 aa		4.89	□□□□□ -1.63
PRE7	YBL041W	EFM1	P38732	585 aa		4.89	□□□□□ -1.63
PRE7	YBL041W	YHR127W	P38833	243 aa	Known RBP	4.89	□□□□□ -1.63
PRE7	YBL041W	SPG5	P42933	373 aa		4.89	□□□□□ -1.63
PRE7	YBL041W	YFR020W	P43600	232 aa		4.89	□□□□□ -1.63
PRE7	YBL041W	ALK1	P43633	760 aa	Known RBP	4.89	□□□□□ -1.63
PRE7	YBL041W	YJL049W	P47048	450 aa		4.89	□□□□□ -1.63
PRE7	YBL041W	BOL2	P53082	120 aa		4.89	□□□□□ -1.63
PRE7	YBL041W	MPS2	P53159	387 aa		4.89	□□□□□ -1.63
PRE7	YBL041W	BUD32	P53323	261 aa		4.89	□□□□□ -1.63
PRE7	YBL041W	KTR5	P53966	522 aa	Predicted RBP	4.89	□□□□□ -1.63
PRE7	YBL041W	MUS81	Q04149	632 aa	Predicted RBP	4.89	□□□□□ -1.63
PRE7	YBL041W	VID22	Q05934	901 aa		4.89	□□□□□ -1.63
PRE7	YBL041W	ATG23	Q06671	453 aa		4.89	□□□□□ -1.63
PRE7	YBL041W	NOP6	Q07623	225 aa	Known RBP	4.89	□□□□□ -1.63
PRE7	YBL041W	LEU9	Q12166	604 aa	Known RBP	4.89	□□□□□ -1.63
PRE7	YBL041W	CYR1	P08678	2026 aa	Known RBP	4.89	□□□□□ -1.63
PRE7	YBL041W	SEC53	P07283	254 aa	Known RBP	4.88	□□□□□ -1.63
PRE7	YBL041W	LAT1	P12695	482 aa	Known RBP	4.88	□□□□□ -1.63
PRE7	YBL041W	PRP2	P20095	876 aa	Predicted RBP	4.88	□□□□□ -1.63
PRE7	YBL041W	AMD2	P22580	549 aa		4.88	□□□□□ -1.63
PRE7	YBL041W	ARG1	P22768	420 aa		4.88	□□□□□ -1.63
PRE7	YBL041W	SFC1	P33303	322 aa		4.88	□□□□□ -1.63
PRE7	YBL041W	FMP46	P36141	133 aa	Known RBP	4.88	□□□□□ -1.63
PRE7	YBL041W	LAS1	P36146	502 aa	Predicted RBP	4.88	□□□□□ -1.63
PRE7	YBL041W	SOL2	P37262	315 aa		4.88	□□□□□ -1.63
PRE7	YBL041W	MUP3	P38734	546 aa		4.88	□□□□□ -1.63
PRE7	YBL041W	MTG2	P38860	518 aa		4.88	□□□□□ -1.63
PRE7	YBL041W	BEM4	P39011	633 aa		4.88	□□□□□ -1.63
PRE7	YBL041W	GCD14	P46959	383 aa	Predicted RBP	4.88	□□□□□ -1.63
PRE7	YBL041W	ESF2	P53743	316 aa	Known RBP	4.88	□□□□□ -1.63
PRE7	YBL041W	MTQ2	Q03920	221 aa	Predicted RBP	4.88	□□□□□ -1.63
PRE7	YBL041W	BCH1	Q05029	724 aa		4.88	□□□□□ -1.63
PRE7	YBL041W	RRP45	Q05636	305 aa	Known RBP	4.88	□□□□□ -1.63
PRE7	YBL041W	NUR1	Q12066	484 aa		4.88	□□□□□ -1.63
PRE7	YBL041W	ATG29	Q12092	213 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms