RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C RPT5P33297 434 aaKnown RBP12.9□□□□□ -0.34
SSA1YAL005C DOM34P33309 386 aa12.9□□□□□ -0.34
SSA1YAL005C ATG7P38862 630 aa12.9□□□□□ -0.34
SSA1YAL005C VRG4P40107 337 aa12.9□□□□□ -0.34
SSA1YAL005C APQ12P40532 138 aa12.9□□□□□ -0.34
SSA1YAL005C MTR3P48240 250 aaPredicted RBP12.9□□□□□ -0.34
SSA1YAL005C ARE2P53629 642 aaKnown RBP12.9□□□□□ -0.34
SSA1YAL005C YNL140CP53910 189 aa12.9□□□□□ -0.34
SSA1YAL005C MCH5Q08777 521 aa12.9□□□□□ -0.34
SSA1YAL005C ZIP1P31111 875 aa12.9□□□□□ -0.35
SSA1YAL005C SFC1P33303 322 aa12.9□□□□□ -0.35
SSA1YAL005C RRN10P38204 145 aa12.9□□□□□ -0.35
SSA1YAL005C LRO1P40345 661 aa12.9□□□□□ -0.35
SSA1YAL005C FMP32P43557 207 aa12.9□□□□□ -0.35
SSA1YAL005C IDP3P53982 420 aaKnown RBP12.9□□□□□ -0.35
SSA1YAL005C GLE1Q12315 538 aa12.9□□□□□ -0.35
SSA1YAL005C ATP6P00854 259 aa12.89□□□□□ -0.35
SSA1YAL005C ARG81P05085 880 aa12.89□□□□□ -0.35
SSA1YAL005C PHO87P25360 923 aa12.89□□□□□ -0.35
SSA1YAL005C AAR2P32357 355 aaPredicted RBP12.89□□□□□ -0.35
SSA1YAL005C IAH1P41734 238 aa12.89□□□□□ -0.35
SSA1YAL005C AIM22P47051 409 aa12.89□□□□□ -0.35
SSA1YAL005C MTQ2Q03920 221 aaPredicted RBP12.89□□□□□ -0.35
SSA1YAL005C ROY1Q04847 553 aa12.89□□□□□ -0.35
SSA1YAL005C DYN3Q04949 312 aa12.89□□□□□ -0.35
SSA1YAL005C BMT6Q12291 365 aa12.89□□□□□ -0.35
SSA1YAL005C RPL1AP0CX43 217 aaKnown RBP12.88□□□□□ -0.35
SSA1YAL005C RPL1BP0CX44 217 aaKnown RBP12.88□□□□□ -0.35
SSA1YAL005C FUR1P18562 216 aaKnown RBP12.88□□□□□ -0.35
SSA1YAL005C TYR1P20049 452 aa12.88□□□□□ -0.35
SSA1YAL005C CDC13P32797 924 aaKnown RBP12.88□□□□□ -0.35
SSA1YAL005C ERV46P39727 415 aa12.88□□□□□ -0.35
SSA1YAL005C AYR1P40471 297 aa12.88□□□□□ -0.35
SSA1YAL005C YHC1Q05900 231 aaKnown RBP12.88□□□□□ -0.35
SSA1YAL005C NMD4Q12129 218 aa12.88□□□□□ -0.35
SSA1YAL005C PRT1P06103 763 aaKnown RBP12.88□□□□□ -0.35
SSA1YAL005C LAT1P12695 482 aaKnown RBP12.88□□□□□ -0.35
SSA1YAL005C SKN1P33336 771 aa12.88□□□□□ -0.35
SSA1YAL005C FMP46P36141 133 aaKnown RBP12.88□□□□□ -0.35
SSA1YAL005C YJL049WP47048 450 aa12.88□□□□□ -0.35
SSA1YAL005C ACL4Q03771 387 aa12.88□□□□□ -0.35
SSA1YAL005C GRC3Q07845 632 aa12.88□□□□□ -0.35
SSA1YAL005C RAS2P01120 322 aaKnown RBP12.87□□□□□ -0.35
SSA1YAL005C MRPL17P36528 281 aa12.87□□□□□ -0.35
SSA1YAL005C COS111P38308 924 aa12.87□□□□□ -0.35
SSA1YAL005C ALG5P40350 334 aa12.87□□□□□ -0.35
SSA1YAL005C FHN1P53279 174 aa12.87□□□□□ -0.35
SSA1YAL005C IRC15Q02733 499 aa12.87□□□□□ -0.35
SSA1YAL005C YPR022CQ12139 1133 aa12.87□□□□□ -0.35
SSA1YAL005C SEN1Q00416 2231 aaKnown RBP12.87□□□□□ -0.35
SSA1YAL005C BIO3P50277 480 aa12.86□□□□□ -0.35
SSA1YAL005C EFR3Q03653 782 aaKnown RBP12.86□□□□□ -0.35
SSA1YAL005C BCP1Q06338 283 aa12.86□□□□□ -0.35
SSA1YAL005C YOR389WQ08912 624 aa12.86□□□□□ -0.35
SSA1YAL005C YIG1Q08956 461 aa12.86□□□□□ -0.35
SSA1YAL005C NSL1Q12143 216 aa12.86□□□□□ -0.35
SSA1YAL005C TPK2P06245 380 aa12.86□□□□□ -0.35
SSA1YAL005C MRP13P12686 339 aa12.86□□□□□ -0.35
SSA1YAL005C PRI2P20457 528 aa12.86□□□□□ -0.35
SSA1YAL005C AGP1P25376 633 aa12.86□□□□□ -0.35
SSA1YAL005C SPS22P25380 463 aa12.86□□□□□ -0.35
SSA1YAL005C MNT3P40549 630 aa12.86□□□□□ -0.35
SSA1YAL005C IMA5P40884 581 aa12.86□□□□□ -0.35
SSA1YAL005C YDR262WQ12331 272 aa12.86□□□□□ -0.35
SSA1YAL005C APC2Q12440 853 aa12.86□□□□□ -0.35
SSA1YAL005C ADE1P27616 306 aa12.85□□□□□ -0.35
SSA1YAL005C IDH2P28241 369 aaKnown RBP12.85□□□□□ -0.35
SSA1YAL005C IST2P38250 946 aa12.85□□□□□ -0.35
SSA1YAL005C MAM33P40513 266 aa12.85□□□□□ -0.35
SSA1YAL005C SEC26P41810 973 aaKnown RBP12.85□□□□□ -0.35
SSA1YAL005C GUS1P46655 708 aaKnown RBP RIP-Chip data12.85□□□□□ -0.35not detected
SSA1YAL005C HSP31Q04432 237 aa12.85□□□□□ -0.35
SSA1YAL005C OPT2Q06593 877 aa12.85□□□□□ -0.35
SSA1YAL005C ATP2P00830 511 aaKnown RBP12.84□□□□□ -0.35
SSA1YAL005C CSM1P25651 190 aa12.84□□□□□ -0.35
SSA1YAL005C VPS21P36017 210 aaKnown RBP12.84□□□□□ -0.35
SSA1YAL005C ROT2P38138 954 aa12.84□□□□□ -0.35
SSA1YAL005C MUS81Q04149 632 aaPredicted RBP12.84□□□□□ -0.35
SSA1YAL005C ASA1Q06822 443 aa12.84□□□□□ -0.35
SSA1YAL005C GYP1Q08484 637 aa12.84□□□□□ -0.35
SSA1YAL005C DIN7Q12086 430 aa12.84□□□□□ -0.35
SSA1YAL005C RPN5Q12250 445 aaKnown RBP12.84□□□□□ -0.35
SSA1YAL005C RRP12Q12754 1228 aaKnown RBP12.84□□□□□ -0.35
SSA1YAL005C BUB3P26449 341 aa12.84□□□□□ -0.35
SSA1YAL005C MUP1P50276 574 aa12.84□□□□□ -0.35
SSA1YAL005C DIA3P52290 468 aa12.84□□□□□ -0.35
SSA1YAL005C STP3Q05937 343 aa12.84□□□□□ -0.35
SSA1YAL005C BNA5Q05979 453 aa12.84□□□□□ -0.35
SSA1YAL005C YOL107WQ12239 342 aa12.84□□□□□ -0.35
SSA1YAL005C ARG3P05150 338 aa12.83□□□□□ -0.36
SSA1YAL005C GAL7P08431 366 aa12.83□□□□□ -0.36
SSA1YAL005C TY2A-LR1P0C2J4 438 aa12.83□□□□□ -0.36
SSA1YAL005C TY2A-FP0CX61 438 aa12.83□□□□□ -0.36
SSA1YAL005C TY2A-GR2P0CX62 438 aa12.83□□□□□ -0.36
SSA1YAL005C SLM5P25345 492 aaKnown RBP12.83□□□□□ -0.36
SSA1YAL005C TY2A-CP25383 438 aa12.83□□□□□ -0.36
SSA1YAL005C SPO23P33757 523 aa12.83□□□□□ -0.36
SSA1YAL005C APT2P36973 181 aa12.83□□□□□ -0.36
SSA1YAL005C TY2A-DR2Q03483 438 aa12.83□□□□□ -0.36
SSA1YAL005C YMR010WQ03687 405 aa12.83□□□□□ -0.36
Retrieved 100 of 5,963 RNA–protein pairs in 87.8 ms