RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 MORC3Q14149 939 aa18.46■□□□□ 0.54
CACNA1A-253ENST00000637927 USPL1Q5W0Q7 1092 aa18.46■□□□□ 0.54
CACNA1A-253ENST00000637927 PCDHA12Q9UN75 941 aa18.46■□□□□ 0.54
CACNA1A-253ENST00000637927 CLIC2O15247 247 aa18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 DDHD2O94830 711 aa18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 LMNB1P20700 586 aa18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 PDCD2Q16342 344 aaPredicted RBP18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 ME3Q16798 604 aa18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 KBTBD3Q8NAB2 608 aa18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 SPOPLQ6IQ16 392 aa18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 FRA10AC1Q70Z53 315 aa18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 RASGRP4Q8TDF6 673 aa18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 NEURL1BA8MQ27 555 aa18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 KCNJ18B7U540 433 aa18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 ARHGAP4P98171 946 aa18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 KCNJ12Q14500 433 aa18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 TMED2Q15363 201 aa18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 RNF219Q5W0B1 726 aaPredicted RBP18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 CAPN11Q9UMQ6 739 aa18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 CAPN7Q9Y6W3 813 aa18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 TFAMQ00059 246 aaKnown RBP18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 GNPTABQ3T906 1256 aa18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 ARHGAP24Q8N264 748 aa18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 PTH1RQ03431 593 aa18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 FBXO11Q86XK2 927 aa18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 PLA2G4DQ86XP0 818 aa18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 DEPDC1BQ8WUY9 529 aa18.45■□□□□ 0.54
CACNA1A-253ENST00000637927 IL13P35225 146 aa18.44■□□□□ 0.54
CACNA1A-253ENST00000637927 LAMC3Q9Y6N6 1575 aa18.44■□□□□ 0.54
CACNA1A-253ENST00000637927 PFDN6O15212 129 aa18.44■□□□□ 0.54
CACNA1A-253ENST00000637927 PHBP35232 272 aa18.44■□□□□ 0.54
CACNA1A-253ENST00000637927 NUP58Q9BVL2 599 aa18.44■□□□□ 0.54
CACNA1A-253ENST00000637927 ADORA1P30542 326 aa18.44■□□□□ 0.54
CACNA1A-253ENST00000637927 RPS8P62241 208 aaKnown RBP18.44■□□□□ 0.54
CACNA1A-253ENST00000637927 NFX1Q12986 1120 aaKnown RBP18.44■□□□□ 0.54
CACNA1A-253ENST00000637927 AFG1LQ8WV93 481 aa18.44■□□□□ 0.54
CACNA1A-253ENST00000637927 RIC8AQ9NPQ8 531 aa18.44■□□□□ 0.54
CACNA1A-253ENST00000637927 PRAG1Q86YV5 1406 aa18.44■□□□□ 0.54
CACNA1A-253ENST00000637927 CHRNDQ07001 517 aa18.44■□□□□ 0.54
CACNA1A-253ENST00000637927 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.44■□□□□ 0.54
CACNA1A-253ENST00000637927 KLF15Q9UIH9 416 aa18.44■□□□□ 0.54
CACNA1A-253ENST00000637927 MOCS3O95396 460 aa18.44■□□□□ 0.54
CACNA1A-253ENST00000637927 GCKP35557 465 aa18.44■□□□□ 0.54
CACNA1A-253ENST00000637927 SLCO1A2P46721 670 aa18.44■□□□□ 0.54
CACNA1A-253ENST00000637927 CYP4F22Q6NT55 531 aa18.44■□□□□ 0.54
CACNA1A-253ENST00000637927 GJA10Q969M2 543 aa18.44■□□□□ 0.54
CACNA1A-253ENST00000637927 C1orf112Q9NSG2 853 aa18.44■□□□□ 0.54
CACNA1A-253ENST00000637927 TEX14Q8IWB6 1497 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 PPEF1O14829 653 aaPredicted RBP18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 ATF2P15336 505 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 RNF135Q8IUD6 432 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 ANKRD13CQ8N6S4 541 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 IBTKQ9P2D0 1353 aaPredicted RBP18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 XRCC5P13010 732 aaKnown RBP18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 GARSP41250 739 aaKnown RBP18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 FAM133BQ5BKY9 247 aaKnown RBP18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 FAM117BQ6P1L5 589 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 SMC5Q8IY18 1101 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 RASSF4Q9H2L5 321 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 PPP1R9AQ9ULJ8 1098 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 CCDC195A0A1B0GUA6 201 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 PFDN1O60925 122 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 B4GALNT4Q76KP1 1039 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 CERS3Q8IU89 383 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 IFNL3Q8IZI9 196 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 A0A0D9SFI3 127 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 PIK3R2O00459 728 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 ANXA13P27216 316 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 ICA1Q05084 483 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 FASTKD5Q7L8L6 764 aaKnown RBP18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 DDX53Q86TM3 631 aaKnown RBP18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 GOLGA5Q8TBA6 731 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 EEF1DP29692 281 aaKnown RBP18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 OAS2P29728 719 aaKnown RBP18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 MECOMQ03112 1051 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 C11orf96Q7Z7L8 435 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 CHURC1Q8WUH1 139 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 STAG1Q8WVM7 1258 aa18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 POLR3CQ9BUI4 534 aaPredicted RBP18.43■□□□□ 0.54
CACNA1A-253ENST00000637927 DPYSL4O14531 572 aa18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 RAD17O75943 681 aa18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 DYNLL1P63167 89 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 RFX8Q6ZV50 586 aa18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 ARFGAP2Q8N6H7 521 aa18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 KCTD6Q8NC69 237 aa18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 ANP32DO95626 131 aa18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 FLOT2Q14254 428 aa18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 SCN4BQ8IWT1 228 aa18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 BLIDQ8IZY5 108 aa18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 CHAMP1Q96JM3 812 aa18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 NLRP4Q96MN2 994 aa18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 TEKT3Q9BXF9 490 aa18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 CLIC4Q9Y696 253 aa18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 PRR23AA6NEV1 266 aa18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 GIGYF1O75420 1035 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 CXCR5P32302 372 aa18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 BASP1P80723 227 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 GLYCTKQ8IVS8 523 aa18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 QTRT2Q9H974 415 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 ARPP21Q9UBL0 812 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms