RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 SLC12A7Q9Y666 1083 aa21.92■■□□□ 1.1
CLN6-221ENST00000637494 CASTP20810 708 aaKnown RBP21.91■■□□□ 1.1
CLN6-221ENST00000637494 CCND2P30279 289 aa21.91■■□□□ 1.1
CLN6-221ENST00000637494 CHMP4BP1P59074 171 aa21.91■■□□□ 1.1
CLN6-221ENST00000637494 PGM5Q15124 567 aa21.91■■□□□ 1.1
CLN6-221ENST00000637494 NBPF20Q3BBV1 942 aa21.91■■□□□ 1.1
CLN6-221ENST00000637494 NFRKBQ6P4R8 1299 aa21.91■■□□□ 1.1
CLN6-221ENST00000637494 RPUSD2Q8IZ73 545 aaKnown RBP21.91■■□□□ 1.1
CLN6-221ENST00000637494 AFG1LQ8WV93 481 aa21.91■■□□□ 1.1
CLN6-221ENST00000637494 NOD1Q9Y239 953 aa21.91■■□□□ 1.1
CLN6-221ENST00000637494 MMP3P08254 477 aa21.9■■□□□ 1.1
CLN6-221ENST00000637494 ARHGAP1Q07960 439 aa21.9■■□□□ 1.1
CLN6-221ENST00000637494 LAMC2Q13753 1193 aa21.9■■□□□ 1.1
CLN6-221ENST00000637494 DGKDQ16760 1214 aa21.9■■□□□ 1.1
CLN6-221ENST00000637494 SLC35G1Q2M3R5 365 aa21.9■■□□□ 1.1
CLN6-221ENST00000637494 TMEM240Q5SV17 173 aa21.9■■□□□ 1.1
CLN6-221ENST00000637494 SKAP1Q86WV1 359 aa21.9■■□□□ 1.1
CLN6-221ENST00000637494 DHX37Q8IY37 1157 aaKnown RBP21.9■■□□□ 1.1
CLN6-221ENST00000637494 FAM161BQ96MY7 647 aa21.9■■□□□ 1.1
CLN6-221ENST00000637494 NOC4LQ9BVI4 516 aaKnown RBP21.9■■□□□ 1.1
CLN6-221ENST00000637494 TRMT13Q9NUP7 481 aaKnown RBP21.9■■□□□ 1.1
CLN6-221ENST00000637494 DDX41Q9UJV9 622 aaKnown RBP21.9■■□□□ 1.1
CLN6-221ENST00000637494 FGBP02675 491 aa21.89■■□□□ 1.09
CLN6-221ENST00000637494 NEFLP07196 543 aa21.89■■□□□ 1.09
CLN6-221ENST00000637494 ACRP10323 421 aa21.89■■□□□ 1.09
CLN6-221ENST00000637494 CCL23P55773 120 aa21.89■■□□□ 1.09
CLN6-221ENST00000637494 KRT32Q14532 448 aa21.89■■□□□ 1.09
CLN6-221ENST00000637494 ZNF365Q70YC5 407 aa21.89■■□□□ 1.09
CLN6-221ENST00000637494 VSIG10LQ86VR7 867 aa21.89■■□□□ 1.09
CLN6-221ENST00000637494 SMARCC2Q8TAQ2 1214 aa21.89■■□□□ 1.09
CLN6-221ENST00000637494 NEK1Q96PY6 1258 aa21.89■■□□□ 1.09
CLN6-221ENST00000637494 KATNAL1Q9BW62 490 aa21.89■■□□□ 1.09
CLN6-221ENST00000637494 KIAA1217Q5T5P2 1943 aa21.88■■□□□ 1.09
CLN6-221ENST00000637494 SZT2Q5T011 3432 aa21.88■■□□□ 1.09
CLN6-221ENST00000637494 TMEM265A0A087WTH1 108 aa21.88■■□□□ 1.09
CLN6-221ENST00000637494 GNPTABQ3T906 1256 aa21.88■■□□□ 1.09
CLN6-221ENST00000637494 RETREG2Q8NC44 543 aa21.88■■□□□ 1.09
CLN6-221ENST00000637494 EMID1Q96A84 441 aaPredicted RBP21.88■■□□□ 1.09
CLN6-221ENST00000637494 STAM2O75886 525 aa21.87■■□□□ 1.09
CLN6-221ENST00000637494 TGFB3P10600 412 aa21.87■■□□□ 1.09
CLN6-221ENST00000637494 CCDC155Q8N6L0 562 aa21.87■■□□□ 1.09
CLN6-221ENST00000637494 LRRC2Q9BYS8 371 aa21.87■■□□□ 1.09
CLN6-221ENST00000637494 LAMA3Q16787 3333 aa21.87■■□□□ 1.09
CLN6-221ENST00000637494 UMODL1Q5DID0 1318 aa21.86■■□□□ 1.09
CLN6-221ENST00000637494 PLEKHA8P1O95397 391 aa21.86■■□□□ 1.09
CLN6-221ENST00000637494 CYP2C9P11712 490 aa21.86■■□□□ 1.09
CLN6-221ENST00000637494 RXRAP19793 462 aa21.86■■□□□ 1.09
CLN6-221ENST00000637494 BFSP2Q13515 415 aa21.86■■□□□ 1.09
CLN6-221ENST00000637494 C16orf59Q7L2K0 433 aa21.86■■□□□ 1.09
CLN6-221ENST00000637494 SGMS1Q86VZ5 419 aa21.86■■□□□ 1.09
CLN6-221ENST00000637494 FANCBQ8NB91 859 aa21.86■■□□□ 1.09
CLN6-221ENST00000637494 SLC17A8Q8NDX2 589 aa21.86■■□□□ 1.09
CLN6-221ENST00000637494 PPTC7Q8NI37 304 aa21.86■■□□□ 1.09
CLN6-221ENST00000637494 SEMA6BQ9H3T3 888 aa21.86■■□□□ 1.09
CLN6-221ENST00000637494 PFKMP08237 780 aa21.85■■□□□ 1.09
CLN6-221ENST00000637494 HMGB1P09429 215 aaKnown RBP21.85■■□□□ 1.09
CLN6-221ENST00000637494 FGD1P98174 961 aa21.85■■□□□ 1.09
CLN6-221ENST00000637494 MICU3Q86XE3 530 aa21.85■■□□□ 1.09
CLN6-221ENST00000637494 SRBD1Q8N5C6 995 aaKnown RBP21.85■■□□□ 1.09
CLN6-221ENST00000637494 C7orf31Q8N865 590 aa21.85■■□□□ 1.09
CLN6-221ENST00000637494 HERVK_113Q902F9 699 aa21.85■■□□□ 1.09
CLN6-221ENST00000637494 SPATA33Q96N06 139 aa21.85■■□□□ 1.09
CLN6-221ENST00000637494 MLXIPQ9HAP2 919 aa21.85■■□□□ 1.09
CLN6-221ENST00000637494 RBM28Q9NW13 759 aaKnown RBP21.85■■□□□ 1.09
CLN6-221ENST00000637494 GGPS1O95749 300 aa21.84■■□□□ 1.09
CLN6-221ENST00000637494 DNAJB2P25686 324 aa21.84■■□□□ 1.09
CLN6-221ENST00000637494 PTGISQ16647 500 aa21.84■■□□□ 1.09
CLN6-221ENST00000637494 CELF3Q5SZQ8 465 aaKnown RBP21.84■■□□□ 1.09
CLN6-221ENST00000637494 DHX32Q7L7V1 743 aaKnown RBP21.84■■□□□ 1.09
CLN6-221ENST00000637494 IL31RAQ8NI17 732 aa21.84■■□□□ 1.09
CLN6-221ENST00000637494 SCLYQ96I15 445 aa21.84■■□□□ 1.09
CLN6-221ENST00000637494 GUCD1Q96NT3 240 aa21.84■■□□□ 1.09
CLN6-221ENST00000637494 WNT8AQ9H1J5 351 aa21.84■■□□□ 1.09
CLN6-221ENST00000637494 SCN10AQ9Y5Y9 1956 aa21.84■■□□□ 1.09
CLN6-221ENST00000637494 BAZ2BQ9UIF8 2168 aaKnown RBP21.83■■□□□ 1.09
CLN6-221ENST00000637494 PITPNM1O00562 1244 aa21.83■■□□□ 1.09
CLN6-221ENST00000637494 PPFIA4O75335 1185 aa21.83■■□□□ 1.09
CLN6-221ENST00000637494 RGS20O76081 388 aa21.83■■□□□ 1.09
CLN6-221ENST00000637494 ACTN1P12814 892 aa21.83■■□□□ 1.09
CLN6-221ENST00000637494 RFC2P35250 354 aa21.83■■□□□ 1.09
CLN6-221ENST00000637494 PSEN2P49810 448 aa21.83■■□□□ 1.09
CLN6-221ENST00000637494 TSGA10IPQ3SY00 556 aa21.83■■□□□ 1.09
CLN6-221ENST00000637494 MYSM1Q5VVJ2 828 aa21.83■■□□□ 1.09
CLN6-221ENST00000637494 XRRA1Q6P2D8 792 aa21.83■■□□□ 1.09
CLN6-221ENST00000637494 OTOP2Q7RTS6 562 aa21.83■■□□□ 1.09
CLN6-221ENST00000637494 SESTD1Q86VW0 696 aa21.83■■□□□ 1.09
CLN6-221ENST00000637494 RAB11FIP4Q86YS3 637 aa21.83■■□□□ 1.09
CLN6-221ENST00000637494 CMTR1Q8N1G2 835 aaKnown RBP21.83■■□□□ 1.09
CLN6-221ENST00000637494 CCDC82Q8N4S0 544 aa21.83■■□□□ 1.09
CLN6-221ENST00000637494 ALG1Q9BT22 464 aa21.83■■□□□ 1.09
CLN6-221ENST00000637494 PSTPIP2Q9H939 334 aa21.83■■□□□ 1.09
CLN6-221ENST00000637494 PIK3CDO00329 1044 aa21.82■■□□□ 1.08
CLN6-221ENST00000637494 UBA1P22314 1058 aaKnown RBP21.82■■□□□ 1.08
CLN6-221ENST00000637494 MFSD10Q14728 455 aa21.82■■□□□ 1.08
CLN6-221ENST00000637494 RASIP1Q5U651 963 aa21.82■■□□□ 1.08
CLN6-221ENST00000637494 USP17L6PQ6QN14 398 aa21.82■■□□□ 1.08
CLN6-221ENST00000637494 TMTC3Q6ZXV5 915 aa21.82■■□□□ 1.08
CLN6-221ENST00000637494 PPP1R13LQ8WUF5 828 aa21.82■■□□□ 1.08
CLN6-221ENST00000637494 MSRAQ9UJ68 235 aa21.82■■□□□ 1.08
CLN6-221ENST00000637494 FRMPD4Q14CM0 1322 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms