RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 KCNJ6P48051 423 aa20.85■□□□□ 0.93
CIITA-215ENST00000637439 DGKDQ16760 1214 aa20.85■□□□□ 0.93
CIITA-215ENST00000637439 QRICH1Q2TAL8 776 aa20.85■□□□□ 0.93
CIITA-215ENST00000637439 ARHGEF16Q5VV41 709 aa20.85■□□□□ 0.93
CIITA-215ENST00000637439 B4GALNT3Q6L9W6 998 aa20.85■□□□□ 0.93
CIITA-215ENST00000637439 CHD1LQ86WJ1 897 aa20.85■□□□□ 0.93
CIITA-215ENST00000637439 PLEKHM2Q8IWE5 1019 aa20.85■□□□□ 0.93
CIITA-215ENST00000637439 ENAHQ8N8S7 591 aaPredicted RBP20.85■□□□□ 0.93
CIITA-215ENST00000637439 EMID1Q96A84 441 aaPredicted RBP20.85■□□□□ 0.93
CIITA-215ENST00000637439 DSCC1Q9BVC3 393 aa20.85■□□□□ 0.93
CIITA-215ENST00000637439 KRT23Q9C075 422 aa20.85■□□□□ 0.93
CIITA-215ENST00000637439 CNNM2Q9H8M5 875 aa20.85■□□□□ 0.93
CIITA-215ENST00000637439 ZSWIM5Q9P217 1185 aa20.85■□□□□ 0.93
CIITA-215ENST00000637439 MTCH2Q9Y6C9 303 aa20.85■□□□□ 0.93
CIITA-215ENST00000637439 MYH6P13533 1939 aa20.84■□□□□ 0.93
CIITA-215ENST00000637439 SKIV2LQ15477 1246 aaKnown RBP20.84■□□□□ 0.93
CIITA-215ENST00000637439 GDF6Q6KF10 455 aaPredicted RBP20.84■□□□□ 0.93
CIITA-215ENST00000637439 CHST3Q7LGC8 479 aa20.84■□□□□ 0.93
CIITA-215ENST00000637439 KATNAL1Q9BW62 490 aa20.84■□□□□ 0.93
CIITA-215ENST00000637439 COL20A1Q9P218 1284 aa20.84■□□□□ 0.93
CIITA-215ENST00000637439 SELPP16109 830 aa20.83■□□□□ 0.93
CIITA-215ENST00000637439 TAP1Q03518 808 aa20.83■□□□□ 0.93
CIITA-215ENST00000637439 RBL2Q08999 1139 aa20.83■□□□□ 0.93
CIITA-215ENST00000637439 LAMC2Q13753 1193 aa20.83■□□□□ 0.93
CIITA-215ENST00000637439 KAT2BQ92831 832 aa20.83■□□□□ 0.93
CIITA-215ENST00000637439 UBAC1Q9BSL1 405 aa20.83■□□□□ 0.93
CIITA-215ENST00000637439 JMJD4Q9H9V9 463 aa20.83■□□□□ 0.93
CIITA-215ENST00000637439 CERS4Q9HA82 394 aa20.83■□□□□ 0.93
CIITA-215ENST00000637439 VAT1LQ9HCJ6 419 aa20.83■□□□□ 0.93
CIITA-215ENST00000637439 MAP3K20Q9NYL2 800 aaKnown RBP20.83■□□□□ 0.93
CIITA-215ENST00000637439 DDX41Q9UJV9 622 aaKnown RBP20.83■□□□□ 0.93
CIITA-215ENST00000637439 REV3LO60673 3130 aa20.83■□□□□ 0.92
CIITA-215ENST00000637439 BDP1A6H8Y1 2624 aa20.83■□□□□ 0.92
CIITA-215ENST00000637439 TRIP12Q14669 1992 aaPredicted RBP20.83■□□□□ 0.92
CIITA-215ENST00000637439 NCOR1O75376 2440 aa20.83■□□□□ 0.92
CIITA-215ENST00000637439 RFXAPO00287 272 aa20.82■□□□□ 0.92
CIITA-215ENST00000637439 TLL1O43897 1013 aa20.82■□□□□ 0.92
CIITA-215ENST00000637439 NR3C2P08235 984 aa20.82■□□□□ 0.92
CIITA-215ENST00000637439 BMP1P13497 986 aa20.82■□□□□ 0.92
CIITA-215ENST00000637439 EIF2AK2P19525 551 aaKnown RBP20.82■□□□□ 0.92
CIITA-215ENST00000637439 COL9A1P20849 921 aa20.82■□□□□ 0.92
CIITA-215ENST00000637439 NUCB1Q02818 461 aa20.82■□□□□ 0.92
CIITA-215ENST00000637439 LRRC8DQ7L1W4 858 aa20.82■□□□□ 0.92
CIITA-215ENST00000637439 C7orf31Q8N865 590 aa20.82■□□□□ 0.92
CIITA-215ENST00000637439 ARNTL2Q8WYA1 636 aa20.82■□□□□ 0.92
CIITA-215ENST00000637439 CTAGE1Q96RT6 745 aa20.82■□□□□ 0.92
CIITA-215ENST00000637439 AMNQ9BXJ7 453 aa20.82■□□□□ 0.92
CIITA-215ENST00000637439 PXMP2Q9NR77 195 aa20.82■□□□□ 0.92
CIITA-215ENST00000637439 GTF2IRD1Q9UHL9 959 aa20.82■□□□□ 0.92
CIITA-215ENST00000637439 COG5Q9UP83 839 aa20.82■□□□□ 0.92
CIITA-215ENST00000637439 MRVI1Q9Y6F6 885 aa20.82■□□□□ 0.92
CIITA-215ENST00000637439 CFBP00751 764 aa20.81■□□□□ 0.92
CIITA-215ENST00000637439 IFIT1BQ5T764 474 aaKnown RBP20.81■□□□□ 0.92
CIITA-215ENST00000637439 CNKSR3Q6P9H4 555 aa20.81■□□□□ 0.92
CIITA-215ENST00000637439 KCNV1Q6PIU1 500 aa20.81■□□□□ 0.92
CIITA-215ENST00000637439 DHX37Q8IY37 1157 aaKnown RBP20.81■□□□□ 0.92
CIITA-215ENST00000637439 SAMD3Q8N6K7 520 aa20.81■□□□□ 0.92
CIITA-215ENST00000637439 PPTC7Q8NI37 304 aa20.81■□□□□ 0.92
CIITA-215ENST00000637439 TET1Q8NFU7 2136 aa20.81■□□□□ 0.92
CIITA-215ENST00000637439 XIRP2A4UGR9 3374 aa20.8■□□□□ 0.92
CIITA-215ENST00000637439 EFCAB14O75071 495 aa20.8■□□□□ 0.92
CIITA-215ENST00000637439 PSEN2P49810 448 aa20.8■□□□□ 0.92
CIITA-215ENST00000637439 HSD17B4P51659 736 aa20.8■□□□□ 0.92
CIITA-215ENST00000637439 WDR5P61964 334 aaKnown RBP20.8■□□□□ 0.92
CIITA-215ENST00000637439 GHRHRQ02643 423 aa20.8■□□□□ 0.92
CIITA-215ENST00000637439 TRAF1Q13077 416 aa20.8■□□□□ 0.92
CIITA-215ENST00000637439 ZBED2Q9BTP6 218 aa20.8■□□□□ 0.92
CIITA-215ENST00000637439 HDAC6Q9UBN7 1215 aa20.8■□□□□ 0.92
CIITA-215ENST00000637439 PRRC2BQ5JSZ5 2229 aaKnown RBP20.8■□□□□ 0.92
CIITA-215ENST00000637439 ABHD14A-ACY1A0A1B0GW23 586 aa20.79■□□□□ 0.92
CIITA-215ENST00000637439 EPOPA6NHQ4 379 aa20.79■□□□□ 0.92
CIITA-215ENST00000637439 F2P00734 622 aa20.79■□□□□ 0.92
CIITA-215ENST00000637439 CXCL10P02778 98 aa20.79■□□□□ 0.92
CIITA-215ENST00000637439 CKBP12277 381 aa20.79■□□□□ 0.92
CIITA-215ENST00000637439 TFF2Q03403 129 aa20.79■□□□□ 0.92
CIITA-215ENST00000637439 PTK7Q13308 1070 aa20.79■□□□□ 0.92
CIITA-215ENST00000637439 MFSD10Q14728 455 aa20.79■□□□□ 0.92
CIITA-215ENST00000637439 DHX38Q92620 1227 aaKnown RBP20.79■□□□□ 0.92
CIITA-215ENST00000637439 KLRF2D3W0D1 207 aa20.78■□□□□ 0.92
CIITA-215ENST00000637439 HAS3O00219 553 aa20.78■□□□□ 0.92
CIITA-215ENST00000637439 GPNMBQ14956 572 aa20.78■□□□□ 0.92
CIITA-215ENST00000637439 KIAA0753Q2KHM9 967 aa20.78■□□□□ 0.92
CIITA-215ENST00000637439 ALG1Q9BT22 464 aa20.78■□□□□ 0.92
CIITA-215ENST00000637439 ZBTB5O15062 677 aa20.77■□□□□ 0.92
CIITA-215ENST00000637439 PPFIA4O75335 1185 aa20.77■□□□□ 0.92
CIITA-215ENST00000637439 ARHGEF15O94989 841 aa20.77■□□□□ 0.92
CIITA-215ENST00000637439 GRB10Q13322 594 aa20.77■□□□□ 0.92
CIITA-215ENST00000637439 IKBKEQ14164 716 aa20.77■□□□□ 0.92
CIITA-215ENST00000637439 STOX1Q6ZVD7 989 aa20.77■□□□□ 0.92
CIITA-215ENST00000637439 STAG2Q8N3U4 1231 aa20.77■□□□□ 0.92
CIITA-215ENST00000637439 MTMR8Q96EF0 704 aa20.77■□□□□ 0.92
CIITA-215ENST00000637439 RAD9AQ99638 391 aa20.77■□□□□ 0.92
CIITA-215ENST00000637439 PDCD2LQ9BRP1 358 aa20.77■□□□□ 0.92
CIITA-215ENST00000637439 LMCD1Q9NZU5 365 aa20.77■□□□□ 0.92
CIITA-215ENST00000637439 PCDHA1Q9Y5I3 950 aa20.77■□□□□ 0.92
CIITA-215ENST00000637439 MYH7BA7E2Y1 1941 aa20.76■□□□□ 0.91
CIITA-215ENST00000637439 PTPRSQ13332 1948 aa20.76■□□□□ 0.91
CIITA-215ENST00000637439 TCF20Q9UGU0 1960 aaKnown RBP20.76■□□□□ 0.91
CIITA-215ENST00000637439 OPLAHO14841 1288 aa20.76■□□□□ 0.91
CIITA-215ENST00000637439 NBNO60934 754 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms