RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 TEX2Q8IWB9 1127 aa19.68■□□□□ 0.74
CLN6-218ENST00000637223 HSCBQ8IWL3 235 aa19.68■□□□□ 0.74
CLN6-218ENST00000637223 LENG1Q96BZ8 264 aaPredicted RBP19.68■□□□□ 0.74
CLN6-218ENST00000637223 HTATIP2Q9BUP3 242 aa19.68■□□□□ 0.74
CLN6-218ENST00000637223 PHF20Q9BVI0 1012 aa19.68■□□□□ 0.74
CLN6-218ENST00000637223 DDX20Q9UHI6 824 aaKnown RBP19.68■□□□□ 0.74
CLN6-218ENST00000637223 FOSP01100 380 aaPredicted RBP19.67■□□□□ 0.74
CLN6-218ENST00000637223 AKR1A1P14550 325 aa19.67■□□□□ 0.74
CLN6-218ENST00000637223 ADCYAP1R1P41586 468 aa19.67■□□□□ 0.74
CLN6-218ENST00000637223 GUCY1B3Q02153 619 aa19.67■□□□□ 0.74
CLN6-218ENST00000637223 CUL4AQ13619 759 aa19.67■□□□□ 0.74
CLN6-218ENST00000637223 TRIM29Q14134 588 aa19.67■□□□□ 0.74
CLN6-218ENST00000637223 NPY5RQ15761 445 aa19.67■□□□□ 0.74
CLN6-218ENST00000637223 CCDC144BQ3MJ40 725 aa19.67■□□□□ 0.74
CLN6-218ENST00000637223 TAPT1Q6NXT6 567 aa19.67■□□□□ 0.74
CLN6-218ENST00000637223 VSIG10LQ86VR7 867 aa19.67■□□□□ 0.74
CLN6-218ENST00000637223 BLIDQ8IZY5 108 aa19.67■□□□□ 0.74
CLN6-218ENST00000637223 FAM177A1Q8N128 213 aaPredicted RBP19.67■□□□□ 0.74
CLN6-218ENST00000637223 DAGLBQ8NCG7 672 aa19.67■□□□□ 0.74
CLN6-218ENST00000637223 EHMT1Q9H9B1 1298 aa19.67■□□□□ 0.74
CLN6-218ENST00000637223 FAM184BQ9ULE4 1060 aa19.67■□□□□ 0.74
CLN6-218ENST00000637223 SMC3Q9UQE7 1217 aa19.67■□□□□ 0.74
CLN6-218ENST00000637223 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.67■□□□□ 0.74
CLN6-218ENST00000637223 NR2E3Q9Y5X4 410 aa19.67■□□□□ 0.74
CLN6-218ENST00000637223 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.66■□□□□ 0.74
CLN6-218ENST00000637223 EIF3JO75822 258 aaKnown RBP19.66■□□□□ 0.74
CLN6-218ENST00000637223 GJB1P08034 283 aa19.66■□□□□ 0.74
CLN6-218ENST00000637223 GJB2P29033 226 aa19.66■□□□□ 0.74
CLN6-218ENST00000637223 KRT40Q6A162 431 aa19.66■□□□□ 0.74
CLN6-218ENST00000637223 GALNT17Q6IS24 598 aa19.66■□□□□ 0.74
CLN6-218ENST00000637223 SEPT14Q6ZU15 432 aa19.66■□□□□ 0.74
CLN6-218ENST00000637223 U2AF1L4Q8WU68 220 aaKnown RBP19.66■□□□□ 0.74
CLN6-218ENST00000637223 C8orf76Q96K31 380 aa19.66■□□□□ 0.74
CLN6-218ENST00000637223 RTEL1Q9NZ71 1219 aa19.66■□□□□ 0.74
CLN6-218ENST00000637223 ADCY6O43306 1168 aa19.65■□□□□ 0.74
CLN6-218ENST00000637223 MRPS9P82933 396 aaKnown RBP19.65■□□□□ 0.74
CLN6-218ENST00000637223 TMEM63BQ5T3F8 832 aa19.65■□□□□ 0.74
CLN6-218ENST00000637223 PCNX4Q63HM2 1172 aa19.65■□□□□ 0.74
CLN6-218ENST00000637223 LHX8Q68G74 356 aa19.65■□□□□ 0.74
CLN6-218ENST00000637223 MCTP2Q6DN12 878 aa19.65■□□□□ 0.74
CLN6-218ENST00000637223 OXER1Q8TDS5 423 aa19.65■□□□□ 0.74
CLN6-218ENST00000637223 FOXD4L1Q9NU39 408 aa19.65■□□□□ 0.74
CLN6-218ENST00000637223 SOX1O00570 391 aaPredicted RBP19.64■□□□□ 0.73
CLN6-218ENST00000637223 MSCO60682 206 aa19.64■□□□□ 0.73
CLN6-218ENST00000637223 SGPL1O95470 568 aa19.64■□□□□ 0.73
CLN6-218ENST00000637223 MMP1P03956 469 aa19.64■□□□□ 0.73
CLN6-218ENST00000637223 RARBP10826 455 aa19.64■□□□□ 0.73
CLN6-218ENST00000637223 PTGS1P23219 599 aa19.64■□□□□ 0.73
CLN6-218ENST00000637223 SREBF1P36956 1147 aa19.64■□□□□ 0.73
CLN6-218ENST00000637223 GJA8P48165 433 aa19.64■□□□□ 0.73
CLN6-218ENST00000637223 TNFAIP2Q03169 654 aa19.64■□□□□ 0.73
CLN6-218ENST00000637223 UBE2Q1Q7Z7E8 422 aa19.64■□□□□ 0.73
CLN6-218ENST00000637223 LRCH3Q96II8 777 aa19.64■□□□□ 0.73
CLN6-218ENST00000637223 WDR11Q9BZH6 1224 aa19.64■□□□□ 0.73
CLN6-218ENST00000637223 LRRC37A2A6NM11 1700 aa19.64■□□□□ 0.73
CLN6-218ENST00000637223 RBM47A0AV96 593 aaKnown RBP19.63■□□□□ 0.73
CLN6-218ENST00000637223 M0R2N6 131 aa19.63■□□□□ 0.73
CLN6-218ENST00000637223 RGS20O76081 388 aa19.63■□□□□ 0.73
CLN6-218ENST00000637223 TFRCP02786 760 aaKnown RBP19.63■□□□□ 0.73
CLN6-218ENST00000637223 SMPD1P17405 629 aa19.63■□□□□ 0.73
CLN6-218ENST00000637223 KRT2P35908 639 aa19.63■□□□□ 0.73
CLN6-218ENST00000637223 ARHGAP4P98171 946 aa19.63■□□□□ 0.73
CLN6-218ENST00000637223 GJC2Q5T442 439 aaPredicted RBP19.63■□□□□ 0.73
CLN6-218ENST00000637223 IQSEC1Q6DN90 963 aa19.63■□□□□ 0.73
CLN6-218ENST00000637223 XRRA1Q6P2D8 792 aa19.63■□□□□ 0.73
CLN6-218ENST00000637223 SCFD2Q8WU76 684 aa19.63■□□□□ 0.73
CLN6-218ENST00000637223 BRMS1Q9HCU9 246 aa19.63■□□□□ 0.73
CLN6-218ENST00000637223 KIF3AQ9Y496 699 aa19.63■□□□□ 0.73
CLN6-218ENST00000637223 RANBP2P49792 3224 aaKnown RBP19.63■□□□□ 0.73
CLN6-218ENST00000637223 ARIH2O95376 493 aa19.62■□□□□ 0.73
CLN6-218ENST00000637223 MYCNP04198 464 aaPredicted RBP19.62■□□□□ 0.73
CLN6-218ENST00000637223 NR5A1Q13285 461 aa19.62■□□□□ 0.73
CLN6-218ENST00000637223 TTLL4Q14679 1199 aa19.62■□□□□ 0.73
CLN6-218ENST00000637223 DIS3L2Q8IYB7 885 aaKnown RBP19.62■□□□□ 0.73
CLN6-218ENST00000637223 XPNPEP3Q9NQH7 507 aa19.62■□□□□ 0.73
CLN6-218ENST00000637223 MRVI1Q9Y6F6 885 aa19.62■□□□□ 0.73
CLN6-218ENST00000637223 BTBD18B2RXH4 712 aa19.61■□□□□ 0.73
CLN6-218ENST00000637223 STAM2O75886 525 aa19.61■□□□□ 0.73
CLN6-218ENST00000637223 PGK1P00558 417 aa19.61■□□□□ 0.73
CLN6-218ENST00000637223 TXNP10599 105 aaKnown RBP19.61■□□□□ 0.73
CLN6-218ENST00000637223 MNX1P50219 401 aaPredicted RBP19.61■□□□□ 0.73
CLN6-218ENST00000637223 LY6KQ17RY6 165 aa19.61■□□□□ 0.73
CLN6-218ENST00000637223 GNPTABQ3T906 1256 aa19.61■□□□□ 0.73
CLN6-218ENST00000637223 KRT25Q7Z3Z0 450 aa19.61■□□□□ 0.73
CLN6-218ENST00000637223 FBXO18Q8NFZ0 1043 aa19.61■□□□□ 0.73
CLN6-218ENST00000637223 TBCKQ8TEA7 893 aa19.61■□□□□ 0.73
CLN6-218ENST00000637223 COPS5Q92905 334 aa19.61■□□□□ 0.73
CLN6-218ENST00000637223 INPP4AQ96PE3 977 aaPredicted RBP19.61■□□□□ 0.73
CLN6-218ENST00000637223 CRISPLD2Q9H0B8 497 aa19.61■□□□□ 0.73
CLN6-218ENST00000637223 OGDHLQ9ULD0 1010 aa19.61■□□□□ 0.73
CLN6-218ENST00000637223 MCM3APO60318 1980 aa19.61■□□□□ 0.73
CLN6-218ENST00000637223 SYNRGQ9UMZ2 1314 aa19.6■□□□□ 0.73
CLN6-218ENST00000637223 CCDC194A0A1B0GVG4 234 aa19.6■□□□□ 0.73
CLN6-218ENST00000637223 A0A1W2PPC1 479 aa19.6■□□□□ 0.73
CLN6-218ENST00000637223 DUSP11O75319 330 aaKnown RBP19.6■□□□□ 0.73
CLN6-218ENST00000637223 ITGB5P18084 799 aa19.6■□□□□ 0.73
CLN6-218ENST00000637223 ZNF76P36508 570 aa19.6■□□□□ 0.73
CLN6-218ENST00000637223 NONOQ15233 471 aaKnown RBP eCLIP19.6■□□□□ 0.738e-7■■■□□ 15.9
CLN6-218ENST00000637223 SAFBQ15424 915 aaKnown RBP eCLIP19.6■□□□□ 0.73
CLN6-218ENST00000637223 DUSP28Q4G0W2 176 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms