RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	LDHC	P07864	332 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	ALAD	P13716	330 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	ATP1A2	P50993	1020 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	PLCD1	P51178	756 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	CCNG1	P51959	295 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	GUCY1A3	Q02108	690 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	MORC3	Q14149	939 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	NFIX	Q14938	502 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	CCDC178	Q5BJE1	867 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	CFAP58	Q5T655	872 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	PTF1A	Q7RTS3	328 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	APTX	Q7Z2E3	356 aa	Known RBP	11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	METTL16	Q86W50	562 aa	Known RBP	11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	GSPT2	Q8IYD1	628 aa	Known RBP	11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	IQCK	Q8N0W5	287 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	NSUN4	Q96CB9	384 aa	Known RBP	11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	HVCN1	Q96D96	273 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	TBC1D31	Q96DN5	1066 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	ATP6V1G3	Q96LB4	118 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	GDAP1L1	Q96MZ0	367 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	ZIM3	Q96PE6	472 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	YIPF3	Q9GZM5	350 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	SLC5A4	Q9NY91	659 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	LMCD1	Q9NZU5	365 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	ANKIB1	Q9P2G1	1089 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	BRWD3	Q6RI45	1802 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	MROH7-TTC4	A0A0A0MT08	1334 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	RASSF10	A6NK89	507 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306		B4DLN1	442 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	STXBP3	O00186	592 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	ORC4	O43929	436 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	DDAH1	O94760	285 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	NPTXR	O95502	500 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	VIM	P08670	466 aa	Known RBP	11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	FAM163B	P0C2L3	166 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	ATP2B4	P23634	1241 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	CCND1	P24385	295 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	SARS	P49591	514 aa	Known RBP	11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	MDM2	Q00987	491 aa	Predicted RBP	11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	DYNC1I2	Q13409	638 aa	Known RBP	11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	SBK1	Q52WX2	424 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	KRT40	Q6A162	431 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	CATIP	Q7Z7H3	387 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	ZNF654	Q8IZM8	581 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	TSEN2	Q8NCE0	465 aa	Known RBP	11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	MIPOL1	Q8TD10	442 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	JAKMIP2	Q96AA8	810 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	SEC16B	Q96JE7	1060 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	ADD3	Q9UEY8	706 aa	Known RBP	11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	BAIAP2L1	Q9UHR4	511 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	PCDHGA4	Q9Y5G9	962 aa		11.87	□□□□□ -0.51
CHD2-223	ENST00000636306	TNKS	O95271	1327 aa		11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	MAFG	O15525	162 aa		11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	BAG3	O95817	575 aa		11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	ATP1A1	P05023	1023 aa	Known RBP	11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	LDHB	P07195	334 aa	Known RBP	11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	PAEP	P09466	180 aa		11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	PRLR	P16471	622 aa		11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	CNGA1	P29973	690 aa		11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	ABCD1	P33897	745 aa		11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	HSPA1L	P34931	641 aa		11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	ERVK-24	P63145	666 aa		11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	MECOM	Q03112	1051 aa		11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	CMPK2	Q5EBM0	449 aa		11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	SPATA1	Q5VX52	437 aa		11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	LRIG3	Q6UXM1	1119 aa		11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	SLF2	Q8IX21	1173 aa		11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	CCDC63	Q8NA47	563 aa		11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	SDR42E1	Q8WUS8	393 aa		11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	CCT6B	Q92526	530 aa		11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	RRP36	Q96EU6	259 aa	Known RBP	11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	ZNF570	Q96NI8	536 aa		11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	PLEKHG4B	Q96PX9	1271 aa		11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	GORASP1	Q9BQQ3	440 aa		11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	SLC26A6	Q9BXS9	759 aa		11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	RNF26	Q9BY78	433 aa	Predicted RBP	11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.86	□□□□□ -0.51
CHD2-223	ENST00000636306	TRAPPC3	O43617	180 aa		11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	ZMYND10	O75800	440 aa		11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	RNF8	O76064	485 aa		11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	FGR	P09769	529 aa		11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	GNAT1	P11488	350 aa		11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	ATP4A	P20648	1035 aa		11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	BMP6	P22004	513 aa		11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	CDC27	P30260	824 aa		11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	TM4SF1	P30408	202 aa		11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	CASP14	P31944	242 aa		11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	CD151	P48509	253 aa		11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	SEC24C	P53992	1094 aa		11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	KRT83	P78385	493 aa		11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	FMR1	Q06787	632 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	ITGB3BP	Q13352	177 aa	Predicted RBP	11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	CUL3	Q13618	768 aa		11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	SEPT2	Q15019	361 aa		11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	NTRK3	Q16288	839 aa		11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	IFI16	Q16666	785 aa	Known RBP	11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	LRRC23	Q53EV4	343 aa	Predicted RBP	11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	IFIT1B	Q5T764	474 aa	Known RBP	11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	KANK3	Q6NY19	840 aa		11.85	□□□□□ -0.51

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