RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 GNAQP50148 359 aa20.74■□□□□ 0.91
PNKP-225ENST00000636214 ANTXR2P58335 489 aa20.74■□□□□ 0.91
PNKP-225ENST00000636214 GHRHRQ02643 423 aa20.74■□□□□ 0.91
PNKP-225ENST00000636214 DGKDQ16760 1214 aa20.74■□□□□ 0.91
PNKP-225ENST00000636214 C16orf59Q7L2K0 433 aa20.74■□□□□ 0.91
PNKP-225ENST00000636214 FCHSD1Q86WN1 690 aa20.74■□□□□ 0.91
PNKP-225ENST00000636214 ZNF654Q8IZM8 581 aa20.74■□□□□ 0.91
PNKP-225ENST00000636214 CCDC155Q8N6L0 562 aa20.74■□□□□ 0.91
PNKP-225ENST00000636214 IGDCC4Q8TDY8 1250 aa20.74■□□□□ 0.91
PNKP-225ENST00000636214 PIBF1Q8WXW3 757 aa20.74■□□□□ 0.91
PNKP-225ENST00000636214 HERVK_113Q902F9 699 aa20.74■□□□□ 0.91
PNKP-225ENST00000636214 TIFAQ96CG3 184 aa20.74■□□□□ 0.91
PNKP-225ENST00000636214 RRP36Q96EU6 259 aaKnown RBP20.74■□□□□ 0.91
PNKP-225ENST00000636214 TMEM87BQ96K49 555 aa20.74■□□□□ 0.91
PNKP-225ENST00000636214 PDCD2LQ9BRP1 358 aa20.74■□□□□ 0.91
PNKP-225ENST00000636214 MSRAQ9UJ68 235 aa20.74■□□□□ 0.91
PNKP-225ENST00000636214 ZBBXA8MT70 800 aa20.73■□□□□ 0.91
PNKP-225ENST00000636214 PFKMP08237 780 aa20.73■□□□□ 0.91
PNKP-225ENST00000636214 FOSL2P15408 326 aa20.73■□□□□ 0.91
PNKP-225ENST00000636214 CCND2P30279 289 aa20.73■□□□□ 0.91
PNKP-225ENST00000636214 ARHGAP1Q07960 439 aa20.73■□□□□ 0.91
PNKP-225ENST00000636214 BFSP2Q13515 415 aa20.73■□□□□ 0.91
PNKP-225ENST00000636214 LAMC2Q13753 1193 aa20.73■□□□□ 0.91
PNKP-225ENST00000636214 RNF20Q5VTR2 975 aa20.73■□□□□ 0.91
PNKP-225ENST00000636214 DHX37Q8IY37 1157 aaKnown RBP20.73■□□□□ 0.91
PNKP-225ENST00000636214 CUL5Q93034 780 aa20.73■□□□□ 0.91
PNKP-225ENST00000636214 SCLYQ96I15 445 aa20.73■□□□□ 0.91
PNKP-225ENST00000636214 MAP3K14Q99558 947 aa20.73■□□□□ 0.91
PNKP-225ENST00000636214 LZTS2Q9BRK4 669 aa20.73■□□□□ 0.91
PNKP-225ENST00000636214 KATNAL1Q9BW62 490 aa20.73■□□□□ 0.91
PNKP-225ENST00000636214 LSG1Q9H089 658 aaKnown RBP20.73■□□□□ 0.91
PNKP-225ENST00000636214 WNT8AQ9H1J5 351 aa20.73■□□□□ 0.91
PNKP-225ENST00000636214 TTYH1Q9H313 450 aaPredicted RBP20.73■□□□□ 0.91
PNKP-225ENST00000636214 LY9Q9HBG7 655 aa20.73■□□□□ 0.91
PNKP-225ENST00000636214 MYH7BA7E2Y1 1941 aa20.72■□□□□ 0.91
PNKP-225ENST00000636214 OPLAHO14841 1288 aa20.72■□□□□ 0.91
PNKP-225ENST00000636214 SLC27A2O14975 620 aa20.72■□□□□ 0.91
PNKP-225ENST00000636214 CALM1P0DP23 149 aa20.72■□□□□ 0.91
PNKP-225ENST00000636214 CALM2P0DP24 149 aa20.72■□□□□ 0.91
PNKP-225ENST00000636214 CALM3P0DP25 149 aa20.72■□□□□ 0.91
PNKP-225ENST00000636214 PGM5Q15124 567 aa20.72■□□□□ 0.91
PNKP-225ENST00000636214 RAB30Q15771 203 aa20.72■□□□□ 0.91
PNKP-225ENST00000636214 BMP2KLQ5H9B9 411 aa20.72■□□□□ 0.91
PNKP-225ENST00000636214 OTOP2Q7RTS6 562 aa20.72■□□□□ 0.91
PNKP-225ENST00000636214 MYLIPQ8WY64 445 aa20.72■□□□□ 0.91
PNKP-225ENST00000636214 DDX41Q9UJV9 622 aaKnown RBP20.72■□□□□ 0.91
PNKP-225ENST00000636214 A0A0C4DFX4 3053 aa20.71■□□□□ 0.91
PNKP-225ENST00000636214 CYTH3O43739 400 aa20.71■□□□□ 0.91
PNKP-225ENST00000636214 ACTN1P12814 892 aa20.71■□□□□ 0.91
PNKP-225ENST00000636214 CREB3L3Q68CJ9 461 aa20.71■□□□□ 0.91
PNKP-225ENST00000636214 MYL10Q9BUA6 226 aa20.71■□□□□ 0.91
PNKP-225ENST00000636214 SPZ1Q9BXG8 430 aa20.71■□□□□ 0.91
PNKP-225ENST00000636214 SLC4A7Q9Y6M7 1214 aa20.71■□□□□ 0.91
PNKP-225ENST00000636214 SH2B2O14492 632 aaPredicted RBP20.7■□□□□ 0.9
PNKP-225ENST00000636214 RFC2P35250 354 aa20.7■□□□□ 0.9
PNKP-225ENST00000636214 PTGISQ16647 500 aa20.7■□□□□ 0.9
PNKP-225ENST00000636214 GNPTABQ3T906 1256 aa20.7■□□□□ 0.9
PNKP-225ENST00000636214 RASIP1Q5U651 963 aa20.7■□□□□ 0.9
PNKP-225ENST00000636214 SYNE3Q6ZMZ3 975 aa20.7■□□□□ 0.9
PNKP-225ENST00000636214 DEFB128Q7Z7B8 93 aa20.7■□□□□ 0.9
PNKP-225ENST00000636214 VSIG10LQ86VR7 867 aa20.7■□□□□ 0.9
PNKP-225ENST00000636214 C7orf31Q8N865 590 aa20.7■□□□□ 0.9
PNKP-225ENST00000636214 MAFAQ8NHW3 353 aaPredicted RBP20.7■□□□□ 0.9
PNKP-225ENST00000636214 PPTC7Q8NI37 304 aa20.7■□□□□ 0.9
PNKP-225ENST00000636214 SMARCC2Q8TAQ2 1214 aa20.7■□□□□ 0.9
PNKP-225ENST00000636214 PPP1R13LQ8WUF5 828 aa20.7■□□□□ 0.9
PNKP-225ENST00000636214 EMID1Q96A84 441 aaPredicted RBP20.7■□□□□ 0.9
PNKP-225ENST00000636214 PBX4Q9BYU1 374 aa20.7■□□□□ 0.9
PNKP-225ENST00000636214 ZNF576Q9H609 170 aa20.7■□□□□ 0.9
PNKP-225ENST00000636214 SLC12A7Q9Y666 1083 aa20.7■□□□□ 0.9
PNKP-225ENST00000636214 CUL9Q8IWT3 2517 aa20.69■□□□□ 0.9
PNKP-225ENST00000636214 GRXCR1A8MXD5 290 aa20.69■□□□□ 0.9
PNKP-225ENST00000636214 PITPNM1O00562 1244 aa20.69■□□□□ 0.9
PNKP-225ENST00000636214 SLC35G1Q2M3R5 365 aa20.69■□□□□ 0.9
PNKP-225ENST00000636214 SPATA33Q96N06 139 aa20.69■□□□□ 0.9
PNKP-225ENST00000636214 ALG1Q9BT22 464 aa20.69■□□□□ 0.9
PNKP-225ENST00000636214 MLXIPQ9HAP2 919 aa20.69■□□□□ 0.9
PNKP-225ENST00000636214 CXXC1Q9P0U4 656 aaPredicted RBP20.69■□□□□ 0.9
PNKP-225ENST00000636214 GGPS1O95749 300 aa20.68■□□□□ 0.9
PNKP-225ENST00000636214 TGFB3P10600 412 aa20.68■□□□□ 0.9
PNKP-225ENST00000636214 SMARCA1P28370 1054 aa20.68■□□□□ 0.9
PNKP-225ENST00000636214 CAGE1Q8TC20 777 aa20.68■□□□□ 0.9
PNKP-225ENST00000636214 GAS2L1Q99501 681 aaPredicted RBP20.68■□□□□ 0.9
PNKP-225ENST00000636214 FTOQ9C0B1 505 aaKnown RBP eCLIP20.68■□□□□ 0.9
PNKP-225ENST00000636214 TRIP12Q14669 1992 aaPredicted RBP20.67■□□□□ 0.9
PNKP-225ENST00000636214 DLL1O00548 723 aa20.67■□□□□ 0.9
PNKP-225ENST00000636214 SORBS3O60504 671 aa20.67■□□□□ 0.9
PNKP-225ENST00000636214 STAM2O75886 525 aa20.67■□□□□ 0.9
PNKP-225ENST00000636214 LIFRP42702 1097 aa20.67■□□□□ 0.9
PNKP-225ENST00000636214 PSEN2P49810 448 aa20.67■□□□□ 0.9
PNKP-225ENST00000636214 MFSD10Q14728 455 aa20.67■□□□□ 0.9
PNKP-225ENST00000636214 CELF3Q5SZQ8 465 aaKnown RBP20.67■□□□□ 0.9
PNKP-225ENST00000636214 SESTD1Q86VW0 696 aa20.67■□□□□ 0.9
PNKP-225ENST00000636214 IL31RAQ8NI17 732 aa20.67■□□□□ 0.9
PNKP-225ENST00000636214 SLC28A3Q9HAS3 691 aa20.67■□□□□ 0.9
PNKP-225ENST00000636214 NOP56O00567 594 aaKnown RBP20.66■□□□□ 0.9
PNKP-225ENST00000636214 CDC45O75419 566 aa20.66■□□□□ 0.9
PNKP-225ENST00000636214 ZNF286BP0CG31 522 aa20.66■□□□□ 0.9
PNKP-225ENST00000636214 UBA1P22314 1058 aaKnown RBP20.66■□□□□ 0.9
PNKP-225ENST00000636214 PBX2P40425 430 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms