RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 SHISA4Q96DD7 197 aa11.46□□□□□ -0.57
FOXCUT-201ENST00000628509 MS4A4AQ96JQ5 239 aa11.46□□□□□ -0.57
FOXCUT-201ENST00000628509 RMDN3Q96TC7 470 aa11.46□□□□□ -0.57
FOXCUT-201ENST00000628509 WDR11Q9BZH6 1224 aa11.46□□□□□ -0.57
FOXCUT-201ENST00000628509 NT5C3AQ9H0P0 336 aa11.46□□□□□ -0.57
FOXCUT-201ENST00000628509 FBXO2Q9UK22 296 aaPredicted RBP11.46□□□□□ -0.57
FOXCUT-201ENST00000628509 KCNH3Q9ULD8 1083 aa11.46□□□□□ -0.57
FOXCUT-201ENST00000628509 PCDHA12Q9UN75 941 aa11.46□□□□□ -0.57
FOXCUT-201ENST00000628509 BTBD19C9JJ37 291 aa11.45□□□□□ -0.58
FOXCUT-201ENST00000628509 POTEB2H3BUK9 544 aa11.45□□□□□ -0.58
FOXCUT-201ENST00000628509 MYL1P05976 194 aa11.45□□□□□ -0.58
FOXCUT-201ENST00000628509 MAPK4P31152 587 aa11.45□□□□□ -0.58
FOXCUT-201ENST00000628509 RPS6P62753 249 aaKnown RBP11.45□□□□□ -0.58
FOXCUT-201ENST00000628509 ERVK-9P63128 1117 aa11.45□□□□□ -0.58
FOXCUT-201ENST00000628509 ERVK-24P63145 666 aa11.45□□□□□ -0.58
FOXCUT-201ENST00000628509 AMPD3Q01432 767 aa11.45□□□□□ -0.58
FOXCUT-201ENST00000628509 SEMA3FQ13275 785 aa11.45□□□□□ -0.58
FOXCUT-201ENST00000628509 FAM110CQ1W6H9 321 aa11.45□□□□□ -0.58
FOXCUT-201ENST00000628509 CEP55Q53EZ4 464 aa11.45□□□□□ -0.58
FOXCUT-201ENST00000628509 GPAT2Q6NUI2 795 aa11.45□□□□□ -0.58
FOXCUT-201ENST00000628509 KCNV1Q6PIU1 500 aa11.45□□□□□ -0.58
FOXCUT-201ENST00000628509 PAXIP1Q6ZW49 1069 aaPredicted RBP11.45□□□□□ -0.58
FOXCUT-201ENST00000628509 RASAL3Q86YV0 1011 aa11.45□□□□□ -0.58
FOXCUT-201ENST00000628509 CLEC4DQ8WXI8 215 aa11.45□□□□□ -0.58
FOXCUT-201ENST00000628509 FTOQ9C0B1 505 aaKnown RBP eCLIP11.45□□□□□ -0.58
FOXCUT-201ENST00000628509 ZFYVE28Q9HCC9 887 aa11.45□□□□□ -0.58
FOXCUT-201ENST00000628509 DACT1Q9NYF0 836 aa11.45□□□□□ -0.58
FOXCUT-201ENST00000628509 A0A0G2JMZ2 1700 aa11.45□□□□□ -0.58
FOXCUT-201ENST00000628509 COL11A1P12107 1806 aaPredicted RBP11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 FAM237AA0A1B0GTK4 181 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 NFIBO00712 420 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 DKC1O60832 514 aaKnown RBP eCLIP11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 TXKP42681 527 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 DGKZQ13574 1117 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 BAATQ14032 418 aaPredicted RBP11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 STXBP2Q15833 593 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 PRR16Q569H4 304 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 EARS2Q5JPH6 523 aaKnown RBP11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 AXDND1Q5T1B0 1012 aaPredicted RBP11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 WDR78Q5VTH9 848 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 SASS6Q6UVJ0 657 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 PLA2G4DQ86XP0 818 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 GIMAP8Q8ND71 665 aaPredicted RBP11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 CNNM3Q8NE01 707 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 NEK9Q8TD19 979 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 GPT2Q8TD30 523 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 SYTL5Q8TDW5 730 aaPredicted RBP11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 BRI3BPQ8WY22 251 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 GPRASP2Q96D09 838 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 PGBD1Q96JS3 809 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 MBOAT7Q96N66 472 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 MMP19Q99542 508 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 RIT2Q99578 217 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 CCSER1Q9C0I3 900 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 CSRNP2Q9H175 543 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 TTC12Q9H892 705 aaPredicted RBP11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 TBC1D22BQ9NU19 505 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 CYP39A1Q9NYL5 469 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 MORF4L1Q9UBU8 362 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 LRWD1Q9UFC0 647 aa11.44□□□□□ -0.58
FOXCUT-201ENST00000628509 MYH7BA7E2Y1 1941 aa11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 RLFQ13129 1914 aa11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 FRMPD4Q14CM0 1322 aa11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 RPTORQ8N122 1335 aa11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 FAM205CA6NFA0 338 aa11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 ASB14A6NK59 587 aa11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 OPLAHO14841 1288 aa11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 GADD45BO75293 160 aaPredicted RBP11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 ZNF202O95125 648 aa11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 SMC2O95347 1197 aa11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 CCDC192P0DO97 292 aa11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 PFKFB1P16118 471 aa11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 ERCC3P19447 782 aa11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 MUTP22033 750 aa11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 GJA5P36382 358 aa11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 TAF1CQ15572 869 aaPredicted RBP11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 TPRNQ4KMQ1 711 aa11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 MUM1L1Q5H9M0 696 aa11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 MXRA8Q9BRK3 442 aa11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 TEKT3Q9BXF9 490 aa11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 MOV10L1Q9BXT6 1211 aaKnown RBP11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 NAT10Q9H0A0 1025 aaKnown RBP11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 CLSTN2Q9H4D0 955 aa11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 A1CFQ9NQ94 594 aaKnown RBP11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 PXMP2Q9NR77 195 aa11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 STK17AQ9UEE5 414 aa11.43□□□□□ -0.58
FOXCUT-201ENST00000628509 A0A1B0GVL5 298 aa11.42□□□□□ -0.58
FOXCUT-201ENST00000628509 GAS7O60861 476 aa11.42□□□□□ -0.58
FOXCUT-201ENST00000628509 EIF3JO75822 258 aaKnown RBP11.42□□□□□ -0.58
FOXCUT-201ENST00000628509 TDP2O95551 362 aa11.42□□□□□ -0.58
FOXCUT-201ENST00000628509 STAT6P42226 847 aa11.42□□□□□ -0.58
FOXCUT-201ENST00000628509 TECP42680 631 aa11.42□□□□□ -0.58
FOXCUT-201ENST00000628509 PDE4DQ08499 809 aa11.42□□□□□ -0.58
FOXCUT-201ENST00000628509 MKRN3Q13064 507 aaKnown RBP11.42□□□□□ -0.58
FOXCUT-201ENST00000628509 MTMR1Q13613 665 aa11.42□□□□□ -0.58
FOXCUT-201ENST00000628509 MOGSQ13724 837 aa11.42□□□□□ -0.58
FOXCUT-201ENST00000628509 ARHGEF6Q15052 776 aa11.42□□□□□ -0.58
FOXCUT-201ENST00000628509 PGM5Q15124 567 aa11.42□□□□□ -0.58
FOXCUT-201ENST00000628509 DEFB115Q30KQ5 88 aa11.42□□□□□ -0.58
FOXCUT-201ENST00000628509 RRAGBQ5VZM2 374 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms