RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 GSTA1P08263 222 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 GSTA2P09210 222 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 USP17L8P0C7I0 530 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 GOLGA8FQ08AF8 430 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 GOLGA8DPQ0D2H9 430 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 PPP1R13BQ96KQ4 1090 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 EFCAB6Q5THR3 1501 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 MEIS1O00470 390 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 ENC1O14682 589 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 YWHAGP61981 247 aaKnown RBP eCLIP13.95□□□□□ -0.18
SCN8A-209ENST00000627620 SH2D4BQ5SQS7 431 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 RETREG2Q8NC44 543 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 FAM71BQ8TC56 605 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 DYNLL2Q96FJ2 89 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 NBPF3Q9H094 633 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 ADD3Q9UEY8 706 aaKnown RBP13.95□□□□□ -0.18
SCN8A-209ENST00000627620 ATP7BP35670 1465 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 KDM5DQ9BY66 1539 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 PFDN6O15212 129 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 CLIC2O15247 247 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 STAT2P52630 851 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 PTPN12Q05209 780 aaKnown RBP13.94□□□□□ -0.18
SCN8A-209ENST00000627620 MUM1L1Q5H9M0 696 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 USP17L2Q6R6M4 530 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 C4orf50Q6ZRC1 276 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 CEP170P1Q96L14 293 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 PCIF1Q9H4Z3 704 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 ERVV-1B6SEH8 477 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 IKBKBO14920 756 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 SLFN14P0C7P3 912 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 OSBPP22059 807 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 CDC25BP30305 580 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 MAN2A1Q16706 1144 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 KSR1Q8IVT5 923 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 SLC35F6Q8N357 371 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 LINC00301Q8NCQ3 95 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 RAB3IPQ96QF0 476 aaPredicted RBP13.94□□□□□ -0.18
SCN8A-209ENST00000627620 CAPS2Q9BXY5 557 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 FTOQ9C0B1 505 aaKnown RBP eCLIP13.94□□□□□ -0.18
SCN8A-209ENST00000627620 DHX36Q9H2U1 1008 aaKnown RBP13.94□□□□□ -0.18
SCN8A-209ENST00000627620 NRBP1Q9UHY1 535 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 NLRP1Q9C000 1473 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 SYDE2Q5VT97 1194 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 EFCC1Q9HA90 598 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 ZSWIM5Q9P217 1185 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 STK17AQ9UEE5 414 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 SUPT20HL1Q3ZLR7 823 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 SAMD9Q5K651 1589 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 C11orf57Q6ZUT1 292 aaPredicted RBP13.94□□□□□ -0.18
SCN8A-209ENST00000627620 CEP120Q8N960 986 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 CDKL2Q92772 493 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 ZNF653Q96CK0 615 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 MAN1B1Q9UKM7 699 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 PYCARDQ9ULZ3 195 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 USP6P35125 1406 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 ZSCAN26Q16670 478 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 EP400NLQ6ZTU2 488 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 MAGOHBQ96A72 148 aaKnown RBP13.94□□□□□ -0.18
SCN8A-209ENST00000627620 TRIM11Q96F44 468 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 RUNDC3BQ96NL0 473 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 CDC23Q9UJX2 597 aa13.94□□□□□ -0.18
SCN8A-209ENST00000627620 ERVK-7P63135 1459 aa13.93□□□□□ -0.18
SCN8A-209ENST00000627620 PRPF3O43395 683 aaKnown RBP13.93□□□□□ -0.18
SCN8A-209ENST00000627620 CDC25AP30304 524 aa13.93□□□□□ -0.18
SCN8A-209ENST00000627620 GARSP41250 739 aaKnown RBP13.93□□□□□ -0.18
SCN8A-209ENST00000627620 FKBP3Q00688 224 aaKnown RBP13.93□□□□□ -0.18
SCN8A-209ENST00000627620 RBBP5Q15291 538 aaKnown RBP13.93□□□□□ -0.18
SCN8A-209ENST00000627620 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.93□□□□□ -0.18
SCN8A-209ENST00000627620 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.93□□□□□ -0.18
SCN8A-209ENST00000627620 SGK1O00141 431 aa13.93□□□□□ -0.18
SCN8A-209ENST00000627620 IFNAR1P17181 557 aa13.93□□□□□ -0.18
SCN8A-209ENST00000627620 CCND2P30279 289 aa13.93□□□□□ -0.18
SCN8A-209ENST00000627620 MAPK4P31152 587 aa13.93□□□□□ -0.18
SCN8A-209ENST00000627620 PTPN21Q16825 1174 aa13.93□□□□□ -0.18
SCN8A-209ENST00000627620 HEG1Q9ULI3 1381 aa13.93□□□□□ -0.18
SCN8A-209ENST00000627620 CYP2D7A0A087X1C5 515 aa13.93□□□□□ -0.18
SCN8A-209ENST00000627620 LRRN2O75325 713 aa13.93□□□□□ -0.18
SCN8A-209ENST00000627620 RAD17O75943 681 aa13.93□□□□□ -0.18
SCN8A-209ENST00000627620 LMNB2Q03252 620 aa13.93□□□□□ -0.18
SCN8A-209ENST00000627620 PRPSAP1Q14558 356 aa13.93□□□□□ -0.18
SCN8A-209ENST00000627620 DIXDC1Q155Q3 683 aa13.93□□□□□ -0.18
SCN8A-209ENST00000627620 TMEM206Q9H813 350 aa13.93□□□□□ -0.18
SCN8A-209ENST00000627620 ERBB3P21860 1342 aa13.93□□□□□ -0.18
SCN8A-209ENST00000627620 ARHGAP4P98171 946 aa13.93□□□□□ -0.18
SCN8A-209ENST00000627620 RSPH3Q86UC2 560 aa13.93□□□□□ -0.18
SCN8A-209ENST00000627620 PI4KBQ9UBF8 816 aa13.93□□□□□ -0.18
SCN8A-209ENST00000627620 PBRM1Q86U86 1689 aa13.93□□□□□ -0.18
SCN8A-209ENST00000627620 MAP3K21Q5TCX8 1036 aa13.92□□□□□ -0.18
SCN8A-209ENST00000627620 AP5M1Q9H0R1 490 aa13.92□□□□□ -0.18
SCN8A-209ENST00000627620 PTPREP23469 700 aa13.92□□□□□ -0.18
SCN8A-209ENST00000627620 ABI1Q8IZP0 508 aa13.92□□□□□ -0.18
SCN8A-209ENST00000627620 NPHP4O75161 1426 aaPredicted RBP13.92□□□□□ -0.18
SCN8A-209ENST00000627620 GCC2Q8IWJ2 1684 aa13.92□□□□□ -0.18
SCN8A-209ENST00000627620 POC1B-GALNT4F8VUJ3 575 aa13.92□□□□□ -0.18
SCN8A-209ENST00000627620 MYL1P05976 194 aa13.92□□□□□ -0.18
SCN8A-209ENST00000627620 MECOMQ03112 1051 aa13.92□□□□□ -0.18
SCN8A-209ENST00000627620 GAS2L3Q86XJ1 694 aa13.92□□□□□ -0.18
SCN8A-209ENST00000627620 FAM149B1Q96BN6 582 aa13.92□□□□□ -0.18
SCN8A-209ENST00000627620 CDHR1Q96JP9 859 aa13.92□□□□□ -0.18
SCN8A-209ENST00000627620 IPO11Q9UI26 975 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms