RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 CHD1LQ86WJ1 897 aa19.26■□□□□ 0.67
TRIM29-221ENST00000627238 RMDN3Q96TC7 470 aa19.26■□□□□ 0.67
TRIM29-221ENST00000627238 MAP3K20Q9NYL2 800 aaKnown RBP19.26■□□□□ 0.67
TRIM29-221ENST00000627238 ZSWIM5Q9P217 1185 aa19.26■□□□□ 0.67
TRIM29-221ENST00000627238 DDX41Q9UJV9 622 aaKnown RBP19.26■□□□□ 0.67
TRIM29-221ENST00000627238 NOD1Q9Y239 953 aa19.26■□□□□ 0.67
TRIM29-221ENST00000627238 MRPL11Q9Y3B7 192 aaKnown RBP19.26■□□□□ 0.67
TRIM29-221ENST00000627238 KIF28PB7ZC32 967 aa19.25■□□□□ 0.67
TRIM29-221ENST00000627238 EIF3JO75822 258 aaKnown RBP19.25■□□□□ 0.67
TRIM29-221ENST00000627238 CXCL10P02778 98 aa19.25■□□□□ 0.67
TRIM29-221ENST00000627238 HOXD8P13378 290 aaPredicted RBP19.25■□□□□ 0.67
TRIM29-221ENST00000627238 NUCB1Q02818 461 aa19.25■□□□□ 0.67
TRIM29-221ENST00000627238 TAP1Q03518 808 aa19.25■□□□□ 0.67
TRIM29-221ENST00000627238 AAK1Q2M2I8 961 aa19.25■□□□□ 0.67
TRIM29-221ENST00000627238 GDF6Q6KF10 455 aaPredicted RBP19.25■□□□□ 0.67
TRIM29-221ENST00000627238 FBXO11Q86XK2 927 aa19.25■□□□□ 0.67
TRIM29-221ENST00000627238 MTMR8Q96EF0 704 aa19.25■□□□□ 0.67
TRIM29-221ENST00000627238 RWDD1Q9H446 243 aaPredicted RBP19.25■□□□□ 0.67
TRIM29-221ENST00000627238 JMJD4Q9H9V9 463 aa19.25■□□□□ 0.67
TRIM29-221ENST00000627238 GTF2IRD1Q9UHL9 959 aa19.25■□□□□ 0.67
TRIM29-221ENST00000627238 B4E1Z4 1266 aa19.24■□□□□ 0.67
TRIM29-221ENST00000627238 HAS3O00219 553 aa19.24■□□□□ 0.67
TRIM29-221ENST00000627238 GTPBP6O43824 516 aaPredicted RBP19.24■□□□□ 0.67
TRIM29-221ENST00000627238 F2P00734 622 aa19.24■□□□□ 0.67
TRIM29-221ENST00000627238 SELPP16109 830 aa19.24■□□□□ 0.67
TRIM29-221ENST00000627238 HSD17B4P51659 736 aa19.24■□□□□ 0.67
TRIM29-221ENST00000627238 DGKDQ16760 1214 aa19.24■□□□□ 0.67
TRIM29-221ENST00000627238 SAMD3Q8N6K7 520 aa19.24■□□□□ 0.67
TRIM29-221ENST00000627238 PPTC7Q8NI37 304 aa19.24■□□□□ 0.67
TRIM29-221ENST00000627238 PPP1R13LQ8WUF5 828 aa19.24■□□□□ 0.67
TRIM29-221ENST00000627238 DHX38Q92620 1227 aaKnown RBP19.24■□□□□ 0.67
TRIM29-221ENST00000627238 KATNAL1Q9BW62 490 aa19.24■□□□□ 0.67
TRIM29-221ENST00000627238 FTOQ9C0B1 505 aaKnown RBP eCLIP19.24■□□□□ 0.67
TRIM29-221ENST00000627238 CNNM2Q9H8M5 875 aa19.24■□□□□ 0.67
TRIM29-221ENST00000627238 PXMP2Q9NR77 195 aa19.24■□□□□ 0.67
TRIM29-221ENST00000627238 EPOPA6NHQ4 379 aa19.23■□□□□ 0.67
TRIM29-221ENST00000627238 OPLAHO14841 1288 aa19.23■□□□□ 0.67
TRIM29-221ENST00000627238 ARHGEF15O94989 841 aa19.23■□□□□ 0.67
TRIM29-221ENST00000627238 PARP1P09874 1014 aaKnown RBP19.23■□□□□ 0.67
TRIM29-221ENST00000627238 IMMTQ16891 758 aaKnown RBP19.23■□□□□ 0.67
TRIM29-221ENST00000627238 CWC27Q6UX04 472 aaKnown RBP19.23■□□□□ 0.67
TRIM29-221ENST00000627238 SEPT14Q6ZU15 432 aa19.23■□□□□ 0.67
TRIM29-221ENST00000627238 LRRC8DQ7L1W4 858 aa19.23■□□□□ 0.67
TRIM29-221ENST00000627238 IL27Q8NEV9 243 aa19.23■□□□□ 0.67
TRIM29-221ENST00000627238 KRT23Q9C075 422 aa19.23■□□□□ 0.67
TRIM29-221ENST00000627238 DIAPH3Q9NSV4 1193 aa19.23■□□□□ 0.67
TRIM29-221ENST00000627238 CTNNA3Q9UI47 895 aa19.23■□□□□ 0.67
TRIM29-221ENST00000627238 COG5Q9UP83 839 aa19.23■□□□□ 0.67
TRIM29-221ENST00000627238 NR3C2P08235 984 aa19.22■□□□□ 0.67
TRIM29-221ENST00000627238 WDR5P61964 334 aaKnown RBP19.22■□□□□ 0.67
TRIM29-221ENST00000627238 LAMC2Q13753 1193 aa19.22■□□□□ 0.67
TRIM29-221ENST00000627238 ARHGEF16Q5VV41 709 aa19.22■□□□□ 0.67
TRIM29-221ENST00000627238 CNKSR3Q6P9H4 555 aa19.22■□□□□ 0.67
TRIM29-221ENST00000627238 STOX1Q6ZVD7 989 aa19.22■□□□□ 0.67
TRIM29-221ENST00000627238 AMNQ9BXJ7 453 aa19.22■□□□□ 0.67
TRIM29-221ENST00000627238 LMCD1Q9NZU5 365 aa19.22■□□□□ 0.67
TRIM29-221ENST00000627238 COL4A4P53420 1690 aaPredicted RBP19.21■□□□□ 0.67
TRIM29-221ENST00000627238 RFXAPO00287 272 aa19.21■□□□□ 0.67
TRIM29-221ENST00000627238 EFCAB14O75071 495 aa19.21■□□□□ 0.67
TRIM29-221ENST00000627238 CKBP12277 381 aa19.21■□□□□ 0.67
TRIM29-221ENST00000627238 KCNJ6P48051 423 aa19.21■□□□□ 0.67
TRIM29-221ENST00000627238 PTK7Q13308 1070 aa19.21■□□□□ 0.67
TRIM29-221ENST00000627238 SEC23AQ15436 765 aa19.21■□□□□ 0.67
TRIM29-221ENST00000627238 TRIM71Q2Q1W2 868 aaKnown RBP19.21■□□□□ 0.67
TRIM29-221ENST00000627238 KCNV1Q6PIU1 500 aa19.21■□□□□ 0.67
TRIM29-221ENST00000627238 TLL1O43897 1013 aa19.2■□□□□ 0.66
TRIM29-221ENST00000627238 LPXNO60711 386 aa19.2■□□□□ 0.66
TRIM29-221ENST00000627238 NBNO60934 754 aa19.2■□□□□ 0.66
TRIM29-221ENST00000627238 RGS20O76081 388 aa19.2■□□□□ 0.66
TRIM29-221ENST00000627238 EIF2AK2P19525 551 aaKnown RBP19.2■□□□□ 0.66
TRIM29-221ENST00000627238 COL9A1P20849 921 aa19.2■□□□□ 0.66
TRIM29-221ENST00000627238 PSEN2P49810 448 aa19.2■□□□□ 0.66
TRIM29-221ENST00000627238 TRAF7Q6Q0C0 670 aa19.2■□□□□ 0.66
TRIM29-221ENST00000627238 ARNTL2Q8WYA1 636 aa19.2■□□□□ 0.66
TRIM29-221ENST00000627238 PDCD2LQ9BRP1 358 aa19.2■□□□□ 0.66
TRIM29-221ENST00000627238 UBAC1Q9BSL1 405 aa19.2■□□□□ 0.66
TRIM29-221ENST00000627238 HDAC6Q9UBN7 1215 aa19.2■□□□□ 0.66
TRIM29-221ENST00000627238 MRVI1Q9Y6F6 885 aa19.2■□□□□ 0.66
TRIM29-221ENST00000627238 MYH7BA7E2Y1 1941 aa19.19■□□□□ 0.66
TRIM29-221ENST00000627238 ABHD14A-ACY1A0A1B0GW23 586 aa19.19■□□□□ 0.66
TRIM29-221ENST00000627238 PALM3A6NDB9 673 aaPredicted RBP19.19■□□□□ 0.66
TRIM29-221ENST00000627238 PPFIA4O75335 1185 aa19.19■□□□□ 0.66
TRIM29-221ENST00000627238 CFBP00751 764 aa19.19■□□□□ 0.66
TRIM29-221ENST00000627238 IGHDP01880 384 aa19.19■□□□□ 0.66
TRIM29-221ENST00000627238 TGFB3P10600 412 aa19.19■□□□□ 0.66
TRIM29-221ENST00000627238 TFF2Q03403 129 aa19.19■□□□□ 0.66
TRIM29-221ENST00000627238 GRB10Q13322 594 aa19.19■□□□□ 0.66
TRIM29-221ENST00000627238 IFIT1BQ5T764 474 aaKnown RBP19.19■□□□□ 0.66
TRIM29-221ENST00000627238 B4GALNT3Q6L9W6 998 aa19.19■□□□□ 0.66
TRIM29-221ENST00000627238 VSIG10LQ86VR7 867 aa19.19■□□□□ 0.66
TRIM29-221ENST00000627238 MICALL1Q8N3F8 863 aa19.19■□□□□ 0.66
TRIM29-221ENST00000627238 STAG2Q8N3U4 1231 aa19.19■□□□□ 0.66
TRIM29-221ENST00000627238 C7orf31Q8N865 590 aa19.19■□□□□ 0.66
TRIM29-221ENST00000627238 CERS4Q9HA82 394 aa19.19■□□□□ 0.66
TRIM29-221ENST00000627238 MAD2L2Q9UI95 211 aa19.19■□□□□ 0.66
TRIM29-221ENST00000627238 TCF20Q9UGU0 1960 aaKnown RBP19.19■□□□□ 0.66
TRIM29-221ENST00000627238 KLRF2D3W0D1 207 aa19.18■□□□□ 0.66
TRIM29-221ENST00000627238 ZBTB5O15062 677 aa19.18■□□□□ 0.66
TRIM29-221ENST00000627238 PPP1R11O60927 126 aaPredicted RBP19.18■□□□□ 0.66
TRIM29-221ENST00000627238 GJB5O95377 273 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms