RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 CCDC84Q86UT8 332 aaPredicted RBP10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 SP8Q8IXZ3 490 aa10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 MMGT1Q8N4V1 131 aa10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 FAM71BQ8TC56 605 aa10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 DNAJC19Q96DA6 116 aa10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 PCMTD1Q96MG8 357 aaPredicted RBP10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 COA1Q9GZY4 146 aa10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 GLT8D2Q9H1C3 349 aa10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 PDE11AQ9HCR9 933 aa10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 HDAC6Q9UBN7 1215 aa10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 ADAM21Q9UKJ8 722 aa10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 ATF5Q9Y2D1 282 aaPredicted RBP10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 MYH7BA7E2Y1 1941 aa10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 MYH4Q9Y623 1939 aa10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 FRMPD2Q68DX3 1309 aaPredicted RBP10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 TTLL1O95922 423 aa10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 AARSP49588 968 aaKnown RBP eCLIP10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 MRPL12P52815 198 aaKnown RBP10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 ZCWPW2Q504Y3 356 aa10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 GPATCH4Q5T3I0 446 aaKnown RBP10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 DPP8Q6V1X1 898 aaPredicted RBP10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 ADGRF4Q8IZF3 695 aa10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 TRIM58Q8NG06 486 aa10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 SNX29Q8TEQ0 813 aa10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 BAP1Q92560 729 aa10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 SYN2Q92777 582 aaPredicted RBP10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 HAS1Q92839 578 aa10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 SECISBP2LQ93073 1101 aaKnown RBP10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 HPS3Q969F9 1004 aa10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 CCDC42Q96M95 316 aa10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 CEP63Q96MT8 703 aa10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 MBOAT7Q96N66 472 aa10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 NUDT12Q9BQG2 462 aa10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 SH2D4AQ9H788 454 aa10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 GPCPD1Q9NPB8 672 aa10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 MED4Q9NPJ6 270 aa10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 ARHGAP20Q9P2F6 1191 aa10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 JRKLQ9Y4A0 524 aa10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 PCDHA13Q9Y5I0 950 aa10.68□□□□□ -0.7
IGHV3-54-201ENST00000622166 KDM3AQ9Y4C1 1321 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 SSU72P8A0A1W2PR75 194 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 ERICH4A6NGS2 130 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 RBAK-RBAKDNI3L0D1 243 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 ENC1O14682 589 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 NKRFO15226 690 aaKnown RBP eCLIP10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 ONECUT3O60422 494 aaPredicted RBP10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 PPP1R11O60927 126 aaPredicted RBP10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 RPS6KA5O75582 802 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 SHMT1P34896 483 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 EIF4A3P38919 411 aaKnown RBP10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 KIF11P52732 1056 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 HNRNPH2P55795 449 aaKnown RBP10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 MARSP56192 900 aaKnown RBP10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 GTF2IP78347 998 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 COASYQ13057 564 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 ASTE1Q2TB18 679 aaPredicted RBP10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 IQCEQ6IPM2 695 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 HHIPL2Q6UWX4 724 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 KCNK18Q7Z418 384 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 ZC3H3Q8IXZ2 948 aaKnown RBP10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 MYOCDQ8IZQ8 938 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 LRRC47Q8N1G4 583 aaKnown RBP10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 DDX12PQ92771 950 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 CUL5Q93034 780 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 CCDC17Q96LX7 622 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 NT5C3AQ9H0P0 336 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 NUCKS1Q9H1E3 243 aaKnown RBP10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 EHD4Q9H223 541 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 DDX4Q9NQI0 724 aaKnown RBP10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 LRRC4BQ9NT99 713 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 USP21Q9UK80 565 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 SNX12Q9UMY4 172 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 TFR2Q9UP52 801 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 ANKRD31Q8N7Z5 1873 aa10.67□□□□□ -0.7
IGHV3-54-201ENST00000622166 CYP3A7-CYP3A51PA0A087WV96 503 aa10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 POTEMA6NI47 508 aa10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 LRRIQ3A6PVS8 624 aaPredicted RBP10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 C6orf229H3BNL8 230 aa10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 PDE2AO00408 941 aaPredicted RBP10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 ZBTB5O15062 677 aa10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 EPHB6O15197 1021 aa10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 SRGAP2O75044 1071 aa10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 GNA14O95837 355 aa10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 IDEP14735 1019 aa10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 CYP3A7P24462 503 aa10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 TNNI2P48788 182 aa10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 CYP27A1Q02318 531 aa10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 KCNMA1Q12791 1236 aa10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 MCTP2Q6DN12 878 aa10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 MOXD1Q6UVY6 613 aa10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 CCNI2Q6ZMN8 369 aaPredicted RBP10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 DYMQ7RTS9 669 aa10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 CCDC155Q8N6L0 562 aa10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 NEK11Q8NG66 645 aa10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 IFIH1Q9BYX4 1025 aaKnown RBP10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 SUGCTQ9HAC7 445 aa10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 DDX25Q9UHL0 483 aaKnown RBP10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 SERPINB13Q9UIV8 391 aa10.66□□□□□ -0.7
IGHV3-54-201ENST00000622166 ATP6V0A2Q9Y487 856 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms