RNA–Protein interactions for RNA: ENST00000620364.4

COL19A1-205, Transcript of collagen type XIX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL19A1, Length 6,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL19A1-205ENST00000620364 ATG3Q9NT62 314 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 B4GALNT4Q76KP1 1039 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 GANCQ8TET4 914 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 FOXP1Q9H334 677 aaPredicted RBP13.48□□□□□ -0.25
COL19A1-205ENST00000620364 LMCD1Q9NZU5 365 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 SLC4A1P02730 911 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 ERBB3P21860 1342 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 DSTYKQ6XUX3 929 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 BRINP3Q76B58 766 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 CACNA2D3Q8IZS8 1091 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 MYO3BQ8WXR4 1341 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 FAM149B1Q96BN6 582 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 CNOT6LQ96LI5 555 aaKnown RBP13.48□□□□□ -0.25
COL19A1-205ENST00000620364 RNF26Q9BY78 433 aaPredicted RBP13.48□□□□□ -0.25
COL19A1-205ENST00000620364 MAD1L1Q9Y6D9 718 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 ATXN8OSP0DMR3 200 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 CDK8P49336 464 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 ZNF827Q17R98 1081 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 USP17L2Q6R6M4 530 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 VSIG1Q86XK7 387 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 ELMOD1Q8N336 334 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 AK8Q96MA6 479 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 UBN1Q9NPG3 1134 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 HYOU1Q9Y4L1 999 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 MAGI2Q86UL8 1455 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 VPS41P49754 854 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 FOXP4Q8IVH2 680 aaPredicted RBP13.47□□□□□ -0.25
COL19A1-205ENST00000620364 ARHGAP24Q8N264 748 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 RPF1Q9H9Y2 349 aaKnown RBP13.47□□□□□ -0.25
COL19A1-205ENST00000620364 SRGAP2CP0DJJ0 459 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 PDXDC2PQ6P474 469 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 ADAT2Q7Z6V5 191 aaKnown RBP13.47□□□□□ -0.25
COL19A1-205ENST00000620364 C7orf31Q8N865 590 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 SAR1BQ9Y6B6 198 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 AFPP02771 609 aaKnown RBP13.47□□□□□ -0.25
COL19A1-205ENST00000620364 GNAT1P11488 350 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 HOXA13P31271 388 aaPredicted RBP13.47□□□□□ -0.25
COL19A1-205ENST00000620364 TRAPPC10P48553 1259 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 GUCY2FP51841 1108 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 SIX6OS1Q8N1H7 587 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 TRIM11Q96F44 468 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 VCXQ9H320 206 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 VCX3BQ9H321 246 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 ANTXR1Q9H6X2 564 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 TYW1Q9NV66 732 aaKnown RBP13.47□□□□□ -0.25
COL19A1-205ENST00000620364 ANGPTL3Q9Y5C1 460 aa13.47□□□□□ -0.25
COL19A1-205ENST00000620364 NR2F2P24468 414 aa13.46□□□□□ -0.25
COL19A1-205ENST00000620364 CLCN1P35523 988 aa13.46□□□□□ -0.25
COL19A1-205ENST00000620364 RC3H1Q5TC82 1133 aaKnown RBP13.46□□□□□ -0.25
COL19A1-205ENST00000620364 ERVK-7P63135 1459 aa13.46□□□□□ -0.25
COL19A1-205ENST00000620364 ABCC12Q96J65 1359 aa13.46□□□□□ -0.25
COL19A1-205ENST00000620364 EIF2AK2P19525 551 aaKnown RBP13.46□□□□□ -0.25
COL19A1-205ENST00000620364 HOXD10P28358 340 aa13.46□□□□□ -0.25
COL19A1-205ENST00000620364 SYNE4Q8N205 404 aa13.46□□□□□ -0.25
COL19A1-205ENST00000620364 CHMP6Q96FZ7 201 aa13.46□□□□□ -0.25
COL19A1-205ENST00000620364 PLEKHF1Q96S99 279 aa13.46□□□□□ -0.25
COL19A1-205ENST00000620364 PNMA6FA0A0J9YX94 578 aa13.46□□□□□ -0.25
COL19A1-205ENST00000620364 COBLO75128 1261 aa13.46□□□□□ -0.25
COL19A1-205ENST00000620364 KRT3P12035 628 aa13.46□□□□□ -0.25
COL19A1-205ENST00000620364 FAM186BQ8IYM0 893 aa13.46□□□□□ -0.25
COL19A1-205ENST00000620364 HDAC11Q96DB2 347 aa13.46□□□□□ -0.25
COL19A1-205ENST00000620364 FAM49AQ9H0Q0 323 aaPredicted RBP13.46□□□□□ -0.25
COL19A1-205ENST00000620364 PCDHA7Q9UN72 937 aa13.46□□□□□ -0.25
COL19A1-205ENST00000620364 ZNF148Q9UQR1 794 aa13.46□□□□□ -0.25
COL19A1-205ENST00000620364 SGK1O00141 431 aa13.46□□□□□ -0.25
COL19A1-205ENST00000620364 CLIC2O15247 247 aa13.46□□□□□ -0.25
COL19A1-205ENST00000620364 RGS16O15492 202 aaPredicted RBP13.46□□□□□ -0.25
COL19A1-205ENST00000620364 CDKL2Q92772 493 aa13.46□□□□□ -0.25
COL19A1-205ENST00000620364 TTC36A6NLP5 189 aa13.46□□□□□ -0.26
COL19A1-205ENST00000620364 EIF3CLB5ME19 914 aaKnown RBP13.46□□□□□ -0.26
COL19A1-205ENST00000620364 U2AF2P26368 475 aaKnown RBP eCLIP13.46□□□□□ -0.26
COL19A1-205ENST00000620364 NDUFA8P51970 172 aa13.46□□□□□ -0.26
COL19A1-205ENST00000620364 DCAF4Q8WV16 495 aa13.46□□□□□ -0.26
COL19A1-205ENST00000620364 EIF3CQ99613 913 aaKnown RBP13.46□□□□□ -0.26
COL19A1-205ENST00000620364 LSG1Q9H089 658 aaKnown RBP13.46□□□□□ -0.26
COL19A1-205ENST00000620364 LRRC4Q9HBW1 653 aa13.46□□□□□ -0.26
COL19A1-205ENST00000620364 NXF1Q9UBU9 619 aaKnown RBP13.46□□□□□ -0.26
COL19A1-205ENST00000620364 POLIQ9UNA4 740 aa13.46□□□□□ -0.26
COL19A1-205ENST00000620364 TROVE2P10155 538 aaKnown RBP eCLIP13.45□□□□□ -0.26
COL19A1-205ENST00000620364 STX2P32856 288 aa13.45□□□□□ -0.26
COL19A1-205ENST00000620364 SH3RF3Q8TEJ3 882 aaPredicted RBP13.45□□□□□ -0.26
COL19A1-205ENST00000620364 FAM81BQ96LP2 452 aa13.45□□□□□ -0.26
COL19A1-205ENST00000620364 ZCCHC11Q5TAX3 1644 aaKnown RBP13.45□□□□□ -0.26
COL19A1-205ENST00000620364 CASQ2O14958 399 aaPredicted RBP13.45□□□□□ -0.26
COL19A1-205ENST00000620364 LRRC41Q15345 812 aa13.45□□□□□ -0.26
COL19A1-205ENST00000620364 SH2D4BQ5SQS7 431 aa13.45□□□□□ -0.26
COL19A1-205ENST00000620364 TMEM179Q6ZVK1 233 aa13.45□□□□□ -0.26
COL19A1-205ENST00000620364 RNF139Q8WU17 664 aa13.45□□□□□ -0.26
COL19A1-205ENST00000620364 HEXIM2Q96MH2 286 aaKnown RBP13.45□□□□□ -0.26
COL19A1-205ENST00000620364 STK17AQ9UEE5 414 aa13.45□□□□□ -0.26
COL19A1-205ENST00000620364 CTNNA1P35221 906 aaKnown RBP13.45□□□□□ -0.26
COL19A1-205ENST00000620364 SPATA1Q5VX52 437 aa13.45□□□□□ -0.26
COL19A1-205ENST00000620364 APOBEC3FQ8IUX4 373 aaKnown RBP13.45□□□□□ -0.26
COL19A1-205ENST00000620364 BBOF1Q8ND07 529 aa13.45□□□□□ -0.26
COL19A1-205ENST00000620364 PKNOX2Q96KN3 472 aa13.45□□□□□ -0.26
COL19A1-205ENST00000620364 NLRP4Q96MN2 994 aa13.45□□□□□ -0.26
COL19A1-205ENST00000620364 PUS7LQ9H0K6 701 aaKnown RBP13.45□□□□□ -0.26
COL19A1-205ENST00000620364 DDX41Q9UJV9 622 aaKnown RBP13.45□□□□□ -0.26
COL19A1-205ENST00000620364 SYNMO15061 1565 aa13.45□□□□□ -0.26
COL19A1-205ENST00000620364 RBBP5Q15291 538 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms