RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 A0A087X0B3 334 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 PSMD14O00487 310 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 CHMP2AO43633 222 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 H2AFZP0C0S5 128 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 GFPT1Q06210 699 aaPredicted RBP13.53□□□□□ -0.24
SPCS1-206ENST00000619898 IFT88Q13099 833 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 H2AFVQ71UI9 128 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 CELF1Q92879 486 aaKnown RBP13.53□□□□□ -0.24
SPCS1-206ENST00000619898 NAP1L3Q99457 506 aaPredicted RBP13.53□□□□□ -0.24
SPCS1-206ENST00000619898 PSTPIP2Q9H939 334 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 PIK3C2AO00443 1686 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 CNTNAP5Q8WYK1 1306 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 XRN1Q8IZH2 1706 aaKnown RBP13.53□□□□□ -0.24
SPCS1-206ENST00000619898 TARSL2A2RTX5 802 aaKnown RBP13.53□□□□□ -0.24
SPCS1-206ENST00000619898 SRGNP10124 158 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 TMEM47Q9BQJ4 181 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 VIPAS39Q9H9C1 493 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 GGA1Q9UJY5 639 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 TCRBV5S4A2TA0A5A2 114 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 LRRIQ3A6PVS8 624 aaPredicted RBP13.53□□□□□ -0.24
SPCS1-206ENST00000619898 ORC4O43929 436 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 SLC1A4P43007 532 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 SYCE1Q8N0S2 351 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 FAM84BQ96KN1 310 aaPredicted RBP13.53□□□□□ -0.24
SPCS1-206ENST00000619898 PLVAPQ9BX97 442 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 TRIM9Q9C026 710 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 RNF14Q9UBS8 474 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 HPCAL4Q9UM19 191 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 SNX12Q9UMY4 172 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 FRMD4BQ9Y2L6 1034 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 POTEMA6NI47 508 aa13.52□□□□□ -0.24
SPCS1-206ENST00000619898 KLK7P49862 253 aa13.52□□□□□ -0.24
SPCS1-206ENST00000619898 LRRC63Q05C16 580 aa13.52□□□□□ -0.24
SPCS1-206ENST00000619898 STK4Q13043 487 aa13.52□□□□□ -0.24
SPCS1-206ENST00000619898 RBM26Q5T8P6 1007 aaKnown RBP13.52□□□□□ -0.24
SPCS1-206ENST00000619898 CCNI2Q6ZMN8 369 aaPredicted RBP13.52□□□□□ -0.24
SPCS1-206ENST00000619898 STMN4Q9H169 189 aaPredicted RBP13.52□□□□□ -0.24
SPCS1-206ENST00000619898 TMEM60Q9H2L4 133 aa13.52□□□□□ -0.24
SPCS1-206ENST00000619898 AMFRQ9UKV5 643 aa13.52□□□□□ -0.24
SPCS1-206ENST00000619898 NR1D1P20393 614 aa13.52□□□□□ -0.25
SPCS1-206ENST00000619898 NR2F2P24468 414 aa13.52□□□□□ -0.25
SPCS1-206ENST00000619898 STAT1P42224 750 aa13.52□□□□□ -0.25
SPCS1-206ENST00000619898 DPP8Q6V1X1 898 aaPredicted RBP13.52□□□□□ -0.25
SPCS1-206ENST00000619898 LRP10Q7Z4F1 713 aa13.52□□□□□ -0.25
SPCS1-206ENST00000619898 ZNF34Q8IZ26 560 aa13.52□□□□□ -0.25
SPCS1-206ENST00000619898 UNC13DQ70J99 1090 aa13.52□□□□□ -0.25
SPCS1-206ENST00000619898 DDX12PQ92771 950 aa13.52□□□□□ -0.25
SPCS1-206ENST00000619898 PAIP2Q9BPZ3 127 aaKnown RBP13.52□□□□□ -0.25
SPCS1-206ENST00000619898 CCSER1Q9C0I3 900 aa13.52□□□□□ -0.25
SPCS1-206ENST00000619898 PALMO75781 387 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 SERPING1P05155 500 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 CALCOCO2Q13137 446 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 ARHGAP44Q17R89 818 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 EXOC3L4Q17RC7 722 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 HOOK3Q86VS8 718 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 SPATS2Q86XZ4 545 aaKnown RBP13.51□□□□□ -0.25
SPCS1-206ENST00000619898 EHMT1Q9H9B1 1298 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 KCNK9Q9NPC2 374 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.51□□□□□ -0.25
SPCS1-206ENST00000619898 CTTNBP2NLQ9P2B4 639 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 SWAP70Q9UH65 585 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 NRXN3Q9Y4C0 1643 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 RHOBTB3O94955 611 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 PPP1R7Q15435 360 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 SMARCAL1Q9NZC9 954 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 POTEJP0CG39 1038 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 SEC23AQ15436 765 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 PKN1Q16512 942 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 USH1GQ495M9 461 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 ICE2Q659A1 982 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 TMEM139Q8IV31 216 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 CACNA2D3Q8IZS8 1091 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 SH3RF3Q8TEJ3 882 aaPredicted RBP13.51□□□□□ -0.25
SPCS1-206ENST00000619898 VEZTQ9HBM0 779 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 BARHL2Q9NY43 387 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 MTUS1Q9ULD2 1270 aa13.51□□□□□ -0.25
SPCS1-206ENST00000619898 SPOPO43791 374 aa13.5□□□□□ -0.25
SPCS1-206ENST00000619898 PRR16Q569H4 304 aa13.5□□□□□ -0.25
SPCS1-206ENST00000619898 SEL1L2Q5TEA6 688 aa13.5□□□□□ -0.25
SPCS1-206ENST00000619898 MYCT1Q8N699 235 aa13.5□□□□□ -0.25
SPCS1-206ENST00000619898 PAF1Q8N7H5 531 aa13.5□□□□□ -0.25
SPCS1-206ENST00000619898 POLD4Q9HCU8 107 aa13.5□□□□□ -0.25
SPCS1-206ENST00000619898 PCDHA6Q9UN73 950 aa13.5□□□□□ -0.25
SPCS1-206ENST00000619898 PCDHA8Q9Y5H6 950 aa13.5□□□□□ -0.25
SPCS1-206ENST00000619898 DUSP10Q9Y6W6 482 aa13.5□□□□□ -0.25
SPCS1-206ENST00000619898 GRM4Q14833 912 aa13.5□□□□□ -0.25
SPCS1-206ENST00000619898 TRAPPC11Q7Z392 1133 aa13.5□□□□□ -0.25
SPCS1-206ENST00000619898 RDH13Q8NBN7 331 aa13.5□□□□□ -0.25
SPCS1-206ENST00000619898 GIMAP8Q8ND71 665 aaPredicted RBP13.5□□□□□ -0.25
SPCS1-206ENST00000619898 LACRTQ9GZZ8 138 aa13.5□□□□□ -0.25
SPCS1-206ENST00000619898 GLT8D2Q9H1C3 349 aa13.5□□□□□ -0.25
SPCS1-206ENST00000619898 RAB21Q9UL25 225 aa13.5□□□□□ -0.25
SPCS1-206ENST00000619898 FOXP2O15409 715 aa13.5□□□□□ -0.25
SPCS1-206ENST00000619898 FGFR2P21802 821 aa13.5□□□□□ -0.25
SPCS1-206ENST00000619898 MAP2K2P36507 400 aa13.5□□□□□ -0.25
SPCS1-206ENST00000619898 CYP4A11Q02928 519 aa13.5□□□□□ -0.25
SPCS1-206ENST00000619898 NKX1-1Q15270 411 aaPredicted RBP13.5□□□□□ -0.25
SPCS1-206ENST00000619898 UBE2SQ16763 222 aa13.5□□□□□ -0.25
SPCS1-206ENST00000619898 WDR93Q6P2C0 686 aa13.5□□□□□ -0.25
SPCS1-206ENST00000619898 PNMA8AQ86V59 439 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms