RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 DOK7Q18PE1 504 aa21.42■■□□□ 1.02
PCDHGB3-202ENST00000618934 TMEM119Q4V9L6 283 aa21.42■■□□□ 1.02
PCDHGB3-202ENST00000618934 FIGNQ5HY92 759 aa21.42■■□□□ 1.02
PCDHGB3-202ENST00000618934 ZFPM1Q8IX07 1006 aa21.42■■□□□ 1.02
PCDHGB3-202ENST00000618934 MMRN2Q9H8L6 949 aa21.42■■□□□ 1.02
PCDHGB3-202ENST00000618934 USP40Q9NVE5 1235 aa21.42■■□□□ 1.02
PCDHGB3-202ENST00000618934 ADRA2BP18089 450 aa21.41■■□□□ 1.02
PCDHGB3-202ENST00000618934 USP14P54578 494 aa21.41■■□□□ 1.02
PCDHGB3-202ENST00000618934 GUF1Q8N442 669 aaKnown RBP21.41■■□□□ 1.02
PCDHGB3-202ENST00000618934 MLXIPQ9HAP2 919 aa21.41■■□□□ 1.02
PCDHGB3-202ENST00000618934 SERPINB13Q9UIV8 391 aa21.41■■□□□ 1.02
PCDHGB3-202ENST00000618934 PLAGL2Q9UPG8 496 aa21.41■■□□□ 1.02
PCDHGB3-202ENST00000618934 UBAP1LF5GYI3 381 aa21.41■■□□□ 1.02
PCDHGB3-202ENST00000618934 POLRMTO00411 1230 aaKnown RBP21.41■■□□□ 1.02
PCDHGB3-202ENST00000618934 ERLIN1O75477 346 aa21.41■■□□□ 1.02
PCDHGB3-202ENST00000618934 KRT79Q5XKE5 535 aa21.41■■□□□ 1.02
PCDHGB3-202ENST00000618934 DNAJC19Q96DA6 116 aa21.41■■□□□ 1.02
PCDHGB3-202ENST00000618934 GJD4Q96KN9 370 aaPredicted RBP21.41■■□□□ 1.02
PCDHGB3-202ENST00000618934 CCDC42Q96M95 316 aa21.41■■□□□ 1.02
PCDHGB3-202ENST00000618934 HINFPQ9BQA5 517 aa21.41■■□□□ 1.02
PCDHGB3-202ENST00000618934 TBC1D7Q9P0N9 293 aa21.41■■□□□ 1.02
PCDHGB3-202ENST00000618934 DDX25Q9UHL0 483 aaKnown RBP21.41■■□□□ 1.02
PCDHGB3-202ENST00000618934 LTBP1Q14766 1721 aa21.41■■□□□ 1.02
PCDHGB3-202ENST00000618934 hCG_1984214I3L0E3 225 aa21.4■■□□□ 1.02
PCDHGB3-202ENST00000618934 EIF4A3P38919 411 aaKnown RBP21.4■■□□□ 1.02
PCDHGB3-202ENST00000618934 PPP1R2P41236 205 aa21.4■■□□□ 1.02
PCDHGB3-202ENST00000618934 VAV2P52735 878 aa21.4■■□□□ 1.02
PCDHGB3-202ENST00000618934 TUBB4BP68371 445 aa21.4■■□□□ 1.02
PCDHGB3-202ENST00000618934 CDK17Q00537 523 aa21.4■■□□□ 1.02
PCDHGB3-202ENST00000618934 NFIAQ12857 509 aa21.4■■□□□ 1.02
PCDHGB3-202ENST00000618934 ZNF713Q8N859 430 aaPredicted RBP21.4■■□□□ 1.02
PCDHGB3-202ENST00000618934 CAPN6Q9Y6Q1 641 aa21.4■■□□□ 1.02
PCDHGB3-202ENST00000618934 MPHOSPH10O00566 681 aaKnown RBP21.4■■□□□ 1.02
PCDHGB3-202ENST00000618934 HNRNPH2P55795 449 aaKnown RBP21.4■■□□□ 1.02
PCDHGB3-202ENST00000618934 MAN2A1Q16706 1144 aa21.4■■□□□ 1.02
PCDHGB3-202ENST00000618934 WDR93Q6P2C0 686 aa21.4■■□□□ 1.02
PCDHGB3-202ENST00000618934 CRAMP1Q96RY5 1269 aa21.4■■□□□ 1.02
PCDHGB3-202ENST00000618934 PCDHAC2Q9Y5I4 1007 aa21.4■■□□□ 1.02
PCDHGB3-202ENST00000618934 LRRC53A6NM62 1247 aa21.39■■□□□ 1.02
PCDHGB3-202ENST00000618934 FAM196BA6NMK8 535 aa21.39■■□□□ 1.02
PCDHGB3-202ENST00000618934 USP17L15C9J2P7 530 aa21.39■■□□□ 1.02
PCDHGB3-202ENST00000618934 USP17L13C9JLJ4 530 aa21.39■■□□□ 1.02
PCDHGB3-202ENST00000618934 USP17L11C9JVI0 530 aa21.39■■□□□ 1.02
PCDHGB3-202ENST00000618934 USP17L18D6R9N7 530 aa21.39■■□□□ 1.02
PCDHGB3-202ENST00000618934 USP17L22D6RA61 530 aa21.39■■□□□ 1.02
PCDHGB3-202ENST00000618934 USP17L17D6RBQ6 530 aa21.39■■□□□ 1.02
PCDHGB3-202ENST00000618934 USP17L19D6RCP7 530 aa21.39■■□□□ 1.02
PCDHGB3-202ENST00000618934 USP17L20D6RJB6 530 aa21.39■■□□□ 1.02
PCDHGB3-202ENST00000618934 HNRNPH3P31942 346 aaKnown RBP21.39■■□□□ 1.02
PCDHGB3-202ENST00000618934 USP17L24Q0WX57 530 aa21.39■■□□□ 1.02
PCDHGB3-202ENST00000618934 CCDC96Q2M329 555 aa21.39■■□□□ 1.02
PCDHGB3-202ENST00000618934 CDC42EP5Q6NZY7 148 aa21.39■■□□□ 1.02
PCDHGB3-202ENST00000618934 USP17L6PQ6QN14 398 aa21.39■■□□□ 1.02
PCDHGB3-202ENST00000618934 NPHP3-ACAD11A0A0J9YXS1 232 aa21.39■■□□□ 1.01
PCDHGB3-202ENST00000618934 PPEF1O14829 653 aaPredicted RBP21.39■■□□□ 1.01
PCDHGB3-202ENST00000618934 CACNB1Q02641 598 aaPredicted RBP21.39■■□□□ 1.01
PCDHGB3-202ENST00000618934 PPP4R3AQ6IN85 833 aa21.39■■□□□ 1.01
PCDHGB3-202ENST00000618934 RRAGAQ7L523 313 aa21.39■■□□□ 1.01
PCDHGB3-202ENST00000618934 BAP1Q92560 729 aa21.39■■□□□ 1.01
PCDHGB3-202ENST00000618934 DRC1Q96MC2 740 aa21.39■■□□□ 1.01
PCDHGB3-202ENST00000618934 KANSL2Q9H9L4 492 aa21.39■■□□□ 1.01
PCDHGB3-202ENST00000618934 VPS18Q9P253 973 aa21.39■■□□□ 1.01
PCDHGB3-202ENST00000618934 PCDHA13Q9Y5I0 950 aa21.39■■□□□ 1.01
PCDHGB3-202ENST00000618934 ARFGEF1Q9Y6D6 1849 aa21.39■■□□□ 1.01
PCDHGB3-202ENST00000618934 MYH4Q9Y623 1939 aa21.39■■□□□ 1.01
PCDHGB3-202ENST00000618934 KCNMA1Q12791 1236 aa21.38■■□□□ 1.01
PCDHGB3-202ENST00000618934 KIF5AQ12840 1032 aa21.38■■□□□ 1.01
PCDHGB3-202ENST00000618934 COASYQ13057 564 aa21.38■■□□□ 1.01
PCDHGB3-202ENST00000618934 KCNQ5Q9NR82 932 aa21.38■■□□□ 1.01
PCDHGB3-202ENST00000618934 SALL4Q9UJQ4 1053 aa21.38■■□□□ 1.01
PCDHGB3-202ENST00000618934 E9PMD0 336 aa21.38■■□□□ 1.01
PCDHGB3-202ENST00000618934 IPO7O95373 1038 aaKnown RBP21.38■■□□□ 1.01
PCDHGB3-202ENST00000618934 MOCS3O95396 460 aa21.38■■□□□ 1.01
PCDHGB3-202ENST00000618934 SSBP05455 408 aaKnown RBP eCLIP21.38■■□□□ 1.01
PCDHGB3-202ENST00000618934 KIF11P52732 1056 aa21.38■■□□□ 1.01
PCDHGB3-202ENST00000618934 APBA1Q02410 837 aa21.38■■□□□ 1.01
PCDHGB3-202ENST00000618934 GSPT2Q8IYD1 628 aaKnown RBP21.38■■□□□ 1.01
PCDHGB3-202ENST00000618934 SECISBP2LQ93073 1101 aaKnown RBP21.38■■□□□ 1.01
PCDHGB3-202ENST00000618934 GDAP1L1Q96MZ0 367 aa21.38■■□□□ 1.01
PCDHGB3-202ENST00000618934 JADE2Q9NQC1 790 aa21.38■■□□□ 1.01
PCDHGB3-202ENST00000618934 RAD21O60216 631 aa21.37■■□□□ 1.01
PCDHGB3-202ENST00000618934 CACNB3P54284 484 aa21.37■■□□□ 1.01
PCDHGB3-202ENST00000618934 RAD51AP2Q09MP3 1159 aa21.37■■□□□ 1.01
PCDHGB3-202ENST00000618934 SP8Q8IXZ3 490 aa21.37■■□□□ 1.01
PCDHGB3-202ENST00000618934 CUL5Q93034 780 aa21.37■■□□□ 1.01
PCDHGB3-202ENST00000618934 IFIH1Q9BYX4 1025 aaKnown RBP21.37■■□□□ 1.01
PCDHGB3-202ENST00000618934 RAB34Q9BZG1 259 aa21.37■■□□□ 1.01
PCDHGB3-202ENST00000618934 PSTPIP2Q9H939 334 aa21.37■■□□□ 1.01
PCDHGB3-202ENST00000618934 FAN1Q9Y2M0 1017 aa21.37■■□□□ 1.01
PCDHGB3-202ENST00000618934 KLRG2A4D1S0 409 aaPredicted RBP21.37■■□□□ 1.01
PCDHGB3-202ENST00000618934 PHACTR2O75167 634 aa21.37■■□□□ 1.01
PCDHGB3-202ENST00000618934 MYBL2P10244 700 aa21.37■■□□□ 1.01
PCDHGB3-202ENST00000618934 C2orf54Q08AI8 447 aa21.37■■□□□ 1.01
PCDHGB3-202ENST00000618934 SPA17Q15506 151 aa21.37■■□□□ 1.01
PCDHGB3-202ENST00000618934 APOBEC3HQ6NTF7 200 aaKnown RBP21.37■■□□□ 1.01
PCDHGB3-202ENST00000618934 SEPT12Q8IYM1 358 aa21.37■■□□□ 1.01
PCDHGB3-202ENST00000618934 ANKRD13CQ8N6S4 541 aa21.37■■□□□ 1.01
PCDHGB3-202ENST00000618934 EHBP1Q8NDI1 1231 aa21.37■■□□□ 1.01
PCDHGB3-202ENST00000618934 COG1Q8WTW3 980 aa21.37■■□□□ 1.01
PCDHGB3-202ENST00000618934 DNAJC18Q9H819 358 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms