RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 H3BM21 787 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 ATP2A1O14983 1001 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 SPDYE6P0CI01 402 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 ATP8B2P98198 1209 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 CEP85Q6P2H3 762 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 RIN2Q8WYP3 895 aaPredicted RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 CAPNS2Q96L46 248 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 CGNQ9P2M7 1197 aaKnown RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 ZNF189O75820 626 aaPredicted RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 MPOP05164 745 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 GPSM2P81274 684 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 FPGSQ05932 587 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 RC3H1Q5TC82 1133 aaKnown RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 CEP128Q6ZU80 1094 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 SLC7A3Q8WY07 619 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 LPIN2Q92539 896 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 C1QTNF1Q9BXJ1 281 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 HMGCRP04035 888 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 TEKT4Q8WW24 435 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 C2orf40Q9H1Z8 148 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 DENND4AQ7Z401 1863 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 ERLIN1O75477 346 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 PDE8BO95263 885 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 ITGA6P23229 1130 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 BTDP43251 543 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 ELAVL2Q12926 359 aaKnown RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 MYO1EQ12965 1108 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 SLFN12Q8IYM2 578 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 RNF139Q8WU17 664 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 UPF1Q92900 1129 aaKnown RBP eCLIP3.7□□□□□ -1.82
LPP-220ENST00000617246 GPN3Q9UHW5 284 aaPredicted RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 IKBKBO14920 756 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 DAB2P98082 770 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 TTC31Q49AM3 519 aaPredicted RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 ACBD5Q5T8D3 534 aaPredicted RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 L3MBTL2Q969R5 705 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 TMEM87BQ96K49 555 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 FOPNLQ96NB1 174 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 IPO5O00410 1097 aaKnown RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 USO1O60763 962 aaKnown RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 NEDD9Q14511 834 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 MIER3Q7Z3K6 550 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 ZSCAN31Q96LW9 406 aaPredicted RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 BRIP1Q9BX63 1249 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 UXTQ9UBK9 157 aaPredicted RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 SAP30BPQ9UHR5 308 aaKnown RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 POLR2MP0CAP2 368 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 DOK7Q18PE1 504 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 TAF1BQ53T94 588 aaPredicted RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 TRMT1LQ7Z2T5 733 aaKnown RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 PLEKHH3Q7Z736 793 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 BAP1Q92560 729 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 HAUS1Q96CS2 278 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 ZNF212Q9UDV6 495 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 HPCAL4Q9UM19 191 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 METAP2P50579 478 aaKnown RBP eCLIP3.69□□□□□ -1.82
LPP-220ENST00000617246 ADCY7P51828 1080 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 DHX32Q7L7V1 743 aaKnown RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 CCDC65Q8IXS2 484 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 SP8Q8IXZ3 490 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 APBB2Q92870 758 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 PALMDQ9NP74 551 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 PALD1Q9ULE6 856 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 TLL1O43897 1013 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 LETM1O95202 739 aaPredicted RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 ANGEL2Q5VTE6 544 aaKnown RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 TDRD7Q8NHU6 1098 aaKnown RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 CCT6BQ92526 530 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 ARHGEF1Q92888 912 aaKnown RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 FRMD4BQ9Y2L6 1034 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 HEATR3Q7Z4Q2 680 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 TDRD5Q8NAT2 981 aaKnown RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 ARL8AQ96BM9 186 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 PRR12Q9ULL5 1215 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 SLX4Q8IY92 1834 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 H3BUI4 141 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 KRT19P08727 400 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 TWF2Q6IBS0 349 aaKnown RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 HHIPL2Q6UWX4 724 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 TAOK1Q7L7X3 1001 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 SIN3AQ96ST3 1273 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 C11orf49Q9H6J7 331 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 ACAD9Q9H845 621 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 CALUO43852 315 aaPredicted RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 CTNNB1P35222 781 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 HDLBPQ00341 1268 aaKnown RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 CCDC157Q569K6 752 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 C16orf59Q7L2K0 433 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 EVI5LQ96CN4 794 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 SRRTQ9BXP5 876 aaKnown RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 GMNNO75496 209 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 ALADP13716 330 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 ALDH7A1P49419 539 aaKnown RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 ZNF467Q7Z7K2 595 aaPredicted RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 WDR33Q9C0J8 1336 aaKnown RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 PSMD14O00487 310 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 ALDH1L2Q3SY69 923 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 CCDC144CPQ8IYA2 1237 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 ALG6Q9Y672 507 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 ARHGEF35A5YM69 484 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms