RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 PDIA4P13667 645 aaKnown RBP17.8■□□□□ 0.44
PCDHGC3-204ENST00000617222 ZNF76P36508 570 aa17.8■□□□□ 0.44
PCDHGC3-204ENST00000617222 PKP1Q13835 747 aa17.8■□□□□ 0.44
PCDHGC3-204ENST00000617222 XRRA1Q6P2D8 792 aa17.8■□□□□ 0.44
PCDHGC3-204ENST00000617222 FBXO46Q6PJ61 603 aaPredicted RBP17.8■□□□□ 0.44
PCDHGC3-204ENST00000617222 CRYGNQ8WXF5 182 aa17.8■□□□□ 0.44
PCDHGC3-204ENST00000617222 EIF3JO75822 258 aaKnown RBP17.79■□□□□ 0.44
PCDHGC3-204ENST00000617222 CYP3A4P08684 503 aa17.79■□□□□ 0.44
PCDHGC3-204ENST00000617222 ATP2B1P20020 1258 aa17.79■□□□□ 0.44
PCDHGC3-204ENST00000617222 USP11P51784 963 aa17.79■□□□□ 0.44
PCDHGC3-204ENST00000617222 CACNB2Q08289 660 aaPredicted RBP17.79■□□□□ 0.44
PCDHGC3-204ENST00000617222 ACVR2BQ13705 512 aa17.79■□□□□ 0.44
PCDHGC3-204ENST00000617222 SEPT14Q6ZU15 432 aa17.79■□□□□ 0.44
PCDHGC3-204ENST00000617222 FBXO16Q8IX29 292 aaPredicted RBP17.79■□□□□ 0.44
PCDHGC3-204ENST00000617222 SH3TC2Q8TF17 1288 aa17.79■□□□□ 0.44
PCDHGC3-204ENST00000617222 ABHD16BQ9H3Z7 469 aa17.79■□□□□ 0.44
PCDHGC3-204ENST00000617222 ZHX1Q9UKY1 873 aaPredicted RBP17.79■□□□□ 0.44
PCDHGC3-204ENST00000617222 CNPY2Q9Y2B0 182 aa17.79■□□□□ 0.44
PCDHGC3-204ENST00000617222 INHAP05111 366 aa17.78■□□□□ 0.44
PCDHGC3-204ENST00000617222 ZSCAN22P10073 491 aaPredicted RBP17.78■□□□□ 0.44
PCDHGC3-204ENST00000617222 LETM2Q2VYF4 491 aa17.78■□□□□ 0.44
PCDHGC3-204ENST00000617222 SLC9C1Q4G0N8 1177 aa17.78■□□□□ 0.44
PCDHGC3-204ENST00000617222 NEK8Q86SG6 692 aa17.78■□□□□ 0.44
PCDHGC3-204ENST00000617222 CYP2W1Q8TAV3 490 aa17.78■□□□□ 0.44
PCDHGC3-204ENST00000617222 MXRA8Q9BRK3 442 aa17.78■□□□□ 0.44
PCDHGC3-204ENST00000617222 KATNBL1Q9H079 304 aa17.78■□□□□ 0.44
PCDHGC3-204ENST00000617222 VTA1Q9NP79 307 aa17.78■□□□□ 0.44
PCDHGC3-204ENST00000617222 PDGFCQ9NRA1 345 aa17.78■□□□□ 0.44
PCDHGC3-204ENST00000617222 UBIAD1Q9Y5Z9 338 aa17.78■□□□□ 0.44
PCDHGC3-204ENST00000617222 LCTP09848 1927 aa17.77■□□□□ 0.44
PCDHGC3-204ENST00000617222 STAM2O75886 525 aa17.77■□□□□ 0.44
PCDHGC3-204ENST00000617222 RGS20O76081 388 aa17.77■□□□□ 0.44
PCDHGC3-204ENST00000617222 ZNF865P0CJ78 1059 aaPredicted RBP17.77■□□□□ 0.44
PCDHGC3-204ENST00000617222 PRKAR2AP13861 404 aaKnown RBP17.77■□□□□ 0.44
PCDHGC3-204ENST00000617222 CIITAP33076 1130 aa17.77■□□□□ 0.44
PCDHGC3-204ENST00000617222 RESTQ13127 1097 aa17.77■□□□□ 0.44
PCDHGC3-204ENST00000617222 TAPT1Q6NXT6 567 aa17.77■□□□□ 0.44
PCDHGC3-204ENST00000617222 TRPV1Q8NER1 839 aa17.77■□□□□ 0.44
PCDHGC3-204ENST00000617222 JADE2Q9NQC1 790 aa17.77■□□□□ 0.44
PCDHGC3-204ENST00000617222 NOL7Q9UMY1 257 aaKnown RBP17.77■□□□□ 0.44
PCDHGC3-204ENST00000617222 RBBP6Q7Z6E9 1792 aaKnown RBP17.76■□□□□ 0.43
PCDHGC3-204ENST00000617222 FAM86B1E9PN63 330 aa17.76■□□□□ 0.43
PCDHGC3-204ENST00000617222 BRD1O95696 1058 aa17.76■□□□□ 0.43
PCDHGC3-204ENST00000617222 FAM86B2P0C5J1 330 aa17.76■□□□□ 0.43
PCDHGC3-204ENST00000617222 ITGB5P18084 799 aa17.76■□□□□ 0.43
PCDHGC3-204ENST00000617222 DDIT3P35638 169 aa17.76■□□□□ 0.43
PCDHGC3-204ENST00000617222 CEP55Q53EZ4 464 aa17.76■□□□□ 0.43
PCDHGC3-204ENST00000617222 BRAPQ7Z569 592 aa17.76■□□□□ 0.43
PCDHGC3-204ENST00000617222 NLRX1Q86UT6 975 aa17.76■□□□□ 0.43
PCDHGC3-204ENST00000617222 INPP4AQ96PE3 977 aaPredicted RBP17.76■□□□□ 0.43
PCDHGC3-204ENST00000617222 WDR11Q9BZH6 1224 aa17.76■□□□□ 0.43
PCDHGC3-204ENST00000617222 MCOLN1Q9GZU1 580 aa17.76■□□□□ 0.43
PCDHGC3-204ENST00000617222 ZSCAN16Q9H4T2 348 aaPredicted RBP17.76■□□□□ 0.43
PCDHGC3-204ENST00000617222 NRBP1Q9UHY1 535 aa17.76■□□□□ 0.43
PCDHGC3-204ENST00000617222 ZDHHC9Q9Y397 364 aa17.76■□□□□ 0.43
PCDHGC3-204ENST00000617222 CYP3A7-CYP3A51PA0A087WV96 503 aa17.75■□□□□ 0.43
PCDHGC3-204ENST00000617222 MEIS1O00470 390 aa17.75■□□□□ 0.43
PCDHGC3-204ENST00000617222 WNT7AO00755 349 aa17.75■□□□□ 0.43
PCDHGC3-204ENST00000617222 CCNT1O60563 726 aaKnown RBP17.75■□□□□ 0.43
PCDHGC3-204ENST00000617222 TDP2O95551 362 aa17.75■□□□□ 0.43
PCDHGC3-204ENST00000617222 F13A1P00488 732 aa17.75■□□□□ 0.43
PCDHGC3-204ENST00000617222 CYBAP13498 195 aa17.75■□□□□ 0.43
PCDHGC3-204ENST00000617222 CYP3A7P24462 503 aa17.75■□□□□ 0.43
PCDHGC3-204ENST00000617222 CNGA1P29973 690 aa17.75■□□□□ 0.43
PCDHGC3-204ENST00000617222 CCND3P30281 292 aaPredicted RBP17.75■□□□□ 0.43
PCDHGC3-204ENST00000617222 TOB1P50616 345 aaPredicted RBP17.75■□□□□ 0.43
PCDHGC3-204ENST00000617222 ZNF174Q15697 407 aa17.75■□□□□ 0.43
PCDHGC3-204ENST00000617222 GNPTABQ3T906 1256 aa17.75■□□□□ 0.43
PCDHGC3-204ENST00000617222 PRR16Q569H4 304 aa17.75■□□□□ 0.43
PCDHGC3-204ENST00000617222 MAP3K21Q5TCX8 1036 aa17.75■□□□□ 0.43
PCDHGC3-204ENST00000617222 PLA2G4DQ86XP0 818 aa17.75■□□□□ 0.43
PCDHGC3-204ENST00000617222 PLXNA1Q9UIW2 1896 aa17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 RBM47A0AV96 593 aaKnown RBP17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 SPATA31C2B4DYI2 1134 aa17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 MYCP01106 439 aaPredicted RBP17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 ARP10275 920 aa17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 ADCYAP1R1P41586 468 aa17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 TRAPPC10P48553 1259 aa17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 NUCB2P80303 420 aa17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 NBR1Q14596 966 aa17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 CCDC144BQ3MJ40 725 aa17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 TTC38Q5R3I4 469 aa17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 MYSM1Q5VVJ2 828 aa17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 PPP4R3AQ6IN85 833 aa17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 FAM173BQ6P4H8 233 aa17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 MOXD1Q6UVY6 613 aa17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 NIPA1Q7RTP0 329 aa17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 SCFD2Q8WU76 684 aa17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 GPRASP2Q96D09 838 aa17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 UIMC1Q96RL1 719 aa17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 NAP1L4Q99733 375 aaKnown RBP17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 DDX25Q9UHL0 483 aaKnown RBP17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 FAM184BQ9ULE4 1060 aa17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 MRVI1Q9Y6F6 885 aa17.74■□□□□ 0.43
PCDHGC3-204ENST00000617222 IGLV3-22A0A075B6J6 115 aa17.73■□□□□ 0.43
PCDHGC3-204ENST00000617222 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.73■□□□□ 0.43
PCDHGC3-204ENST00000617222 FIBPO43427 364 aa17.73■□□□□ 0.43
PCDHGC3-204ENST00000617222 ARIH2O95376 493 aa17.73■□□□□ 0.43
PCDHGC3-204ENST00000617222 GCFC2P16383 781 aaKnown RBP17.73■□□□□ 0.43
PCDHGC3-204ENST00000617222 ICAM3P32942 547 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms