RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 CHMP4BP1P59074 171 aa17.2■□□□□ 0.34
PRKN-211ENST00000615065 GRIN2CQ14957 1233 aa17.2■□□□□ 0.34
PRKN-211ENST00000615065 IGDCC4Q8TDY8 1250 aa17.2■□□□□ 0.34
PRKN-211ENST00000615065 PDCD2LQ9BRP1 358 aa17.2■□□□□ 0.34
PRKN-211ENST00000615065 ZNF576Q9H609 170 aa17.2■□□□□ 0.34
PRKN-211ENST00000615065 DDX41Q9UJV9 622 aaKnown RBP17.2■□□□□ 0.34
PRKN-211ENST00000615065 TRIP12Q14669 1992 aaPredicted RBP17.2■□□□□ 0.34
PRKN-211ENST00000615065 MYCLP12524 364 aaPredicted RBP17.19■□□□□ 0.34
PRKN-211ENST00000615065 CATIPQ7Z7H3 387 aa17.19■□□□□ 0.34
PRKN-211ENST00000615065 IL31RAQ8NI17 732 aa17.19■□□□□ 0.34
PRKN-211ENST00000615065 MYL10Q9BUA6 226 aa17.19■□□□□ 0.34
PRKN-211ENST00000615065 LSG1Q9H089 658 aaKnown RBP17.19■□□□□ 0.34
PRKN-211ENST00000615065 MTIF3Q9H2K0 278 aaKnown RBP17.19■□□□□ 0.34
PRKN-211ENST00000615065 MRVI1Q9Y6F6 885 aa17.19■□□□□ 0.34
PRKN-211ENST00000615065 PNMA6FA0A0J9YX94 578 aa17.18■□□□□ 0.34
PRKN-211ENST00000615065 RGS20O76081 388 aa17.18■□□□□ 0.34
PRKN-211ENST00000615065 PTPN11Q06124 597 aaPredicted RBP17.18■□□□□ 0.34
PRKN-211ENST00000615065 COL9A3Q14050 684 aaPredicted RBP17.18■□□□□ 0.34
PRKN-211ENST00000615065 PGM5Q15124 567 aa17.18■□□□□ 0.34
PRKN-211ENST00000615065 SKAP1Q86WV1 359 aa17.18■□□□□ 0.34
PRKN-211ENST00000615065 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.18■□□□□ 0.34
PRKN-211ENST00000615065 RPUSD2Q8IZ73 545 aaKnown RBP17.18■□□□□ 0.34
PRKN-211ENST00000615065 PIBF1Q8WXW3 757 aa17.18■□□□□ 0.34
PRKN-211ENST00000615065 KAT2BQ92831 832 aa17.18■□□□□ 0.34
PRKN-211ENST00000615065 LY9Q9HBG7 655 aa17.18■□□□□ 0.34
PRKN-211ENST00000615065 MAP3K20Q9NYL2 800 aaKnown RBP17.18■□□□□ 0.34
PRKN-211ENST00000615065 CHD9Q3L8U1 2897 aa17.17■□□□□ 0.34
PRKN-211ENST00000615065 GCOM1H8Y6P7 765 aaPredicted RBP17.17■□□□□ 0.34
PRKN-211ENST00000615065 POLR2MP0CAP2 368 aa17.17■□□□□ 0.34
PRKN-211ENST00000615065 DEFB128Q7Z7B8 93 aa17.17■□□□□ 0.34
PRKN-211ENST00000615065 FCHSD1Q86WN1 690 aa17.17■□□□□ 0.34
PRKN-211ENST00000615065 ZNF654Q8IZM8 581 aa17.17■□□□□ 0.34
PRKN-211ENST00000615065 SAMD3Q8N6K7 520 aa17.17■□□□□ 0.34
PRKN-211ENST00000615065 PRUNE2Q8WUY3 3088 aa17.17■□□□□ 0.34
PRKN-211ENST00000615065 EMID1Q96A84 441 aaPredicted RBP17.17■□□□□ 0.34
PRKN-211ENST00000615065 ESYT1Q9BSJ8 1104 aa17.17■□□□□ 0.34
PRKN-211ENST00000615065 DOCK5Q9H7D0 1870 aa17.17■□□□□ 0.34
PRKN-211ENST00000615065 TET1Q8NFU7 2136 aa17.17■□□□□ 0.34
PRKN-211ENST00000615065 MYO9BQ13459 2157 aa17.16■□□□□ 0.34
PRKN-211ENST00000615065 SLC27A2O14975 620 aa17.16■□□□□ 0.34
PRKN-211ENST00000615065 PRC1O43663 620 aa17.16■□□□□ 0.34
PRKN-211ENST00000615065 SORBS3O60504 671 aa17.16■□□□□ 0.34
PRKN-211ENST00000615065 ZNF286BP0CG31 522 aa17.16■□□□□ 0.34
PRKN-211ENST00000615065 CASTP20810 708 aaKnown RBP17.16■□□□□ 0.34
PRKN-211ENST00000615065 TRAF1Q13077 416 aa17.16■□□□□ 0.34
PRKN-211ENST00000615065 PTGISQ16647 500 aa17.16■□□□□ 0.34
PRKN-211ENST00000615065 DGKDQ16760 1214 aa17.16■□□□□ 0.34
PRKN-211ENST00000615065 GDF6Q6KF10 455 aaPredicted RBP17.16■□□□□ 0.34
PRKN-211ENST00000615065 CASC1Q6TDU7 716 aa17.16■□□□□ 0.34
PRKN-211ENST00000615065 VSIG10LQ86VR7 867 aa17.16■□□□□ 0.34
PRKN-211ENST00000615065 ZFP91Q96JP5 570 aaPredicted RBP17.16■□□□□ 0.34
PRKN-211ENST00000615065 CTAGE1Q96RT6 745 aa17.16■□□□□ 0.34
PRKN-211ENST00000615065 MSRAQ9UJ68 235 aa17.16■□□□□ 0.34
PRKN-211ENST00000615065 NOD1Q9Y239 953 aa17.16■□□□□ 0.34
PRKN-211ENST00000615065 YBX2Q9Y2T7 364 aaKnown RBP17.16■□□□□ 0.34
PRKN-211ENST00000615065 ZBBXA8MT70 800 aa17.15■□□□□ 0.34
PRKN-211ENST00000615065 PITPNM1O00562 1244 aa17.15■□□□□ 0.34
PRKN-211ENST00000615065 DDAH1O94760 285 aa17.15■□□□□ 0.34
PRKN-211ENST00000615065 PFKMP08237 780 aa17.15■□□□□ 0.34
PRKN-211ENST00000615065 CCND2P30279 289 aa17.15■□□□□ 0.34
PRKN-211ENST00000615065 RABGGTBP53611 331 aa17.15■□□□□ 0.34
PRKN-211ENST00000615065 SP2Q02086 613 aa17.15■□□□□ 0.34
PRKN-211ENST00000615065 LAMC2Q13753 1193 aa17.15■□□□□ 0.34
PRKN-211ENST00000615065 RAB30Q15771 203 aa17.15■□□□□ 0.34
PRKN-211ENST00000615065 SESTD1Q86VW0 696 aa17.15■□□□□ 0.34
PRKN-211ENST00000615065 DHX37Q8IY37 1157 aaKnown RBP17.15■□□□□ 0.34
PRKN-211ENST00000615065 PPTC7Q8NI37 304 aa17.15■□□□□ 0.34
PRKN-211ENST00000615065 GPKOWQ92917 476 aaPredicted RBP eCLIP17.15■□□□□ 0.34
PRKN-211ENST00000615065 MAP3K14Q99558 947 aa17.15■□□□□ 0.34
PRKN-211ENST00000615065 NKX2-4Q9H2Z4 354 aa17.15■□□□□ 0.34
PRKN-211ENST00000615065 SLC4A7Q9Y6M7 1214 aa17.15■□□□□ 0.34
PRKN-211ENST00000615065 SH2B2O14492 632 aaPredicted RBP17.14■□□□□ 0.33
PRKN-211ENST00000615065 IQCF3P0C7M6 154 aa17.14■□□□□ 0.33
PRKN-211ENST00000615065 MCM5P33992 734 aa17.14■□□□□ 0.33
PRKN-211ENST00000615065 PSEN2P49810 448 aa17.14■□□□□ 0.33
PRKN-211ENST00000615065 CELF3Q5SZQ8 465 aaKnown RBP17.14■□□□□ 0.33
PRKN-211ENST00000615065 CREB3L3Q68CJ9 461 aa17.14■□□□□ 0.33
PRKN-211ENST00000615065 RETREG2Q8NC44 543 aa17.14■□□□□ 0.33
PRKN-211ENST00000615065 CTCFLQ8NI51 663 aaPredicted RBP17.14■□□□□ 0.33
PRKN-211ENST00000615065 MTA3Q9BTC8 594 aa17.14■□□□□ 0.33
PRKN-211ENST00000615065 SPZ1Q9BXG8 430 aa17.14■□□□□ 0.33
PRKN-211ENST00000615065 ANO2Q9NQ90 1003 aa17.14■□□□□ 0.33
PRKN-211ENST00000615065 PTPRSQ13332 1948 aa17.13■□□□□ 0.33
PRKN-211ENST00000615065 PLEKHA8P1O95397 391 aa17.13■□□□□ 0.33
PRKN-211ENST00000615065 GGPS1O95749 300 aa17.13■□□□□ 0.33
PRKN-211ENST00000615065 F2P00734 622 aa17.13■□□□□ 0.33
PRKN-211ENST00000615065 HOXD8P13378 290 aaPredicted RBP17.13■□□□□ 0.33
PRKN-211ENST00000615065 MYOGP15173 224 aa17.13■□□□□ 0.33
PRKN-211ENST00000615065 RXRAP19793 462 aa17.13■□□□□ 0.33
PRKN-211ENST00000615065 UBA1P22314 1058 aaKnown RBP17.13■□□□□ 0.33
PRKN-211ENST00000615065 KIF5BP33176 963 aa17.13■□□□□ 0.33
PRKN-211ENST00000615065 RFC2P35250 354 aa17.13■□□□□ 0.33
PRKN-211ENST00000615065 BFSP2Q13515 415 aa17.13■□□□□ 0.33
PRKN-211ENST00000615065 MFSD10Q14728 455 aa17.13■□□□□ 0.33
PRKN-211ENST00000615065 NECTIN1Q15223 517 aa17.13■□□□□ 0.33
PRKN-211ENST00000615065 MYSM1Q5VVJ2 828 aa17.13■□□□□ 0.33
PRKN-211ENST00000615065 KCNV1Q6PIU1 500 aa17.13■□□□□ 0.33
PRKN-211ENST00000615065 NFXL1Q6ZNB6 911 aa17.13■□□□□ 0.33
PRKN-211ENST00000615065 DHX38Q92620 1227 aaKnown RBP17.13■□□□□ 0.33
PRKN-211ENST00000615065 TMEM87BQ96K49 555 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms