RNA–Protein interactions for RNA: ENST00000614035.4

TNFAIP3-207, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-207ENST00000614035 DLL1O00548 723 aa20.47■□□□□ 0.87
TNFAIP3-207ENST00000614035 PFKMP08237 780 aa20.47■□□□□ 0.87
TNFAIP3-207ENST00000614035 MAFAQ8NHW3 353 aaPredicted RBP20.47■□□□□ 0.87
TNFAIP3-207ENST00000614035 SCLYQ96I15 445 aa20.47■□□□□ 0.87
TNFAIP3-207ENST00000614035 MAP3K14Q99558 947 aa20.47■□□□□ 0.87
TNFAIP3-207ENST00000614035 MTA3Q9BTC8 594 aa20.47■□□□□ 0.87
TNFAIP3-207ENST00000614035 ZNF576Q9H609 170 aa20.47■□□□□ 0.87
TNFAIP3-207ENST00000614035 PITPNM1O00562 1244 aa20.46■□□□□ 0.87
TNFAIP3-207ENST00000614035 HOXA13P31271 388 aaPredicted RBP20.46■□□□□ 0.87
TNFAIP3-207ENST00000614035 PBX2P40425 430 aa20.46■□□□□ 0.87
TNFAIP3-207ENST00000614035 GRIN2CQ14957 1233 aa20.46■□□□□ 0.87
TNFAIP3-207ENST00000614035 OTOP2Q7RTS6 562 aa20.46■□□□□ 0.87
TNFAIP3-207ENST00000614035 VSIG10LQ86VR7 867 aa20.46■□□□□ 0.87
TNFAIP3-207ENST00000614035 SESTD1Q86VW0 696 aa20.46■□□□□ 0.87
TNFAIP3-207ENST00000614035 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.46■□□□□ 0.87
TNFAIP3-207ENST00000614035 LSG1Q9H089 658 aaKnown RBP20.46■□□□□ 0.87
TNFAIP3-207ENST00000614035 MRVI1Q9Y6F6 885 aa20.46■□□□□ 0.87
TNFAIP3-207ENST00000614035 CUL9Q8IWT3 2517 aa20.46■□□□□ 0.87
TNFAIP3-207ENST00000614035 CHD9Q3L8U1 2897 aa20.46■□□□□ 0.87
TNFAIP3-207ENST00000614035 GCOM1H8Y6P7 765 aaPredicted RBP20.45■□□□□ 0.86
TNFAIP3-207ENST00000614035 RGS20O76081 388 aa20.45■□□□□ 0.86
TNFAIP3-207ENST00000614035 POLR2MP0CAP2 368 aa20.45■□□□□ 0.86
TNFAIP3-207ENST00000614035 FOSL2P15408 326 aa20.45■□□□□ 0.86
TNFAIP3-207ENST00000614035 CASTP20810 708 aaKnown RBP20.45■□□□□ 0.86
TNFAIP3-207ENST00000614035 LAMC2Q13753 1193 aa20.45■□□□□ 0.86
TNFAIP3-207ENST00000614035 PPP1R13LQ8WUF5 828 aa20.45■□□□□ 0.86
TNFAIP3-207ENST00000614035 KAT2BQ92831 832 aa20.45■□□□□ 0.86
TNFAIP3-207ENST00000614035 LY9Q9HBG7 655 aa20.45■□□□□ 0.86
TNFAIP3-207ENST00000614035 TANC1Q9C0D5 1861 aa20.45■□□□□ 0.86
TNFAIP3-207ENST00000614035 PRUNE2Q8WUY3 3088 aa20.45■□□□□ 0.86
TNFAIP3-207ENST00000614035 DDAH1O94760 285 aa20.44■□□□□ 0.86
TNFAIP3-207ENST00000614035 PGM5Q15124 567 aa20.44■□□□□ 0.86
TNFAIP3-207ENST00000614035 RAB30Q15771 203 aa20.44■□□□□ 0.86
TNFAIP3-207ENST00000614035 DGKDQ16760 1214 aa20.44■□□□□ 0.86
TNFAIP3-207ENST00000614035 KCNV1Q6PIU1 500 aa20.44■□□□□ 0.86
TNFAIP3-207ENST00000614035 PPTC7Q8NI37 304 aa20.44■□□□□ 0.86
TNFAIP3-207ENST00000614035 ESYT1Q9BSJ8 1104 aa20.44■□□□□ 0.86
TNFAIP3-207ENST00000614035 HOXD8P13378 290 aaPredicted RBP20.44■□□□□ 0.86
TNFAIP3-207ENST00000614035 RFC2P35250 354 aa20.44■□□□□ 0.86
TNFAIP3-207ENST00000614035 ZNF654Q8IZM8 581 aa20.44■□□□□ 0.86
TNFAIP3-207ENST00000614035 IL31RAQ8NI17 732 aa20.44■□□□□ 0.86
TNFAIP3-207ENST00000614035 SPZ1Q9BXG8 430 aa20.44■□□□□ 0.86
TNFAIP3-207ENST00000614035 SCN5AQ14524 2016 aa20.43■□□□□ 0.86
TNFAIP3-207ENST00000614035 PRC1O43663 620 aa20.43■□□□□ 0.86
TNFAIP3-207ENST00000614035 IQCF3P0C7M6 154 aa20.43■□□□□ 0.86
TNFAIP3-207ENST00000614035 TGFB3P10600 412 aa20.43■□□□□ 0.86
TNFAIP3-207ENST00000614035 MYCLP12524 364 aaPredicted RBP20.43■□□□□ 0.86
TNFAIP3-207ENST00000614035 SMARCA1P28370 1054 aa20.43■□□□□ 0.86
TNFAIP3-207ENST00000614035 KIF5BP33176 963 aa20.43■□□□□ 0.86
TNFAIP3-207ENST00000614035 MCM5P33992 734 aa20.43■□□□□ 0.86
TNFAIP3-207ENST00000614035 BFSP2Q13515 415 aa20.43■□□□□ 0.86
TNFAIP3-207ENST00000614035 PTGISQ16647 500 aa20.43■□□□□ 0.86
TNFAIP3-207ENST00000614035 CASC1Q6TDU7 716 aa20.43■□□□□ 0.86
TNFAIP3-207ENST00000614035 DHX37Q8IY37 1157 aaKnown RBP20.43■□□□□ 0.86
TNFAIP3-207ENST00000614035 CTCFLQ8NI51 663 aaPredicted RBP20.43■□□□□ 0.86
TNFAIP3-207ENST00000614035 TMEM87BQ96K49 555 aa20.43■□□□□ 0.86
TNFAIP3-207ENST00000614035 MSRAQ9UJ68 235 aa20.43■□□□□ 0.86
TNFAIP3-207ENST00000614035 NOD1Q9Y239 953 aa20.43■□□□□ 0.86
TNFAIP3-207ENST00000614035 SLC4A7Q9Y6M7 1214 aa20.43■□□□□ 0.86
TNFAIP3-207ENST00000614035 FRMPD4Q14CM0 1322 aa20.42■□□□□ 0.86
TNFAIP3-207ENST00000614035 GBF1Q92538 1859 aa20.42■□□□□ 0.86
TNFAIP3-207ENST00000614035 SLC27A2O14975 620 aa20.42■□□□□ 0.86
TNFAIP3-207ENST00000614035 F2P00734 622 aa20.42■□□□□ 0.86
TNFAIP3-207ENST00000614035 CCND2P30279 289 aa20.42■□□□□ 0.86
TNFAIP3-207ENST00000614035 NECTIN1Q15223 517 aa20.42■□□□□ 0.86
TNFAIP3-207ENST00000614035 BMP2KLQ5H9B9 411 aa20.42■□□□□ 0.86
TNFAIP3-207ENST00000614035 FCHSD1Q86WN1 690 aa20.42■□□□□ 0.86
TNFAIP3-207ENST00000614035 TMTC2Q8N394 836 aa20.42■□□□□ 0.86
TNFAIP3-207ENST00000614035 RETREG2Q8NC44 543 aa20.42■□□□□ 0.86
TNFAIP3-207ENST00000614035 CTAGE1Q96RT6 745 aa20.42■□□□□ 0.86
TNFAIP3-207ENST00000614035 KATNAL1Q9BW62 490 aa20.42■□□□□ 0.86
TNFAIP3-207ENST00000614035 MYH7BA7E2Y1 1941 aa20.41■□□□□ 0.86
TNFAIP3-207ENST00000614035 SH2B2O14492 632 aaPredicted RBP20.41■□□□□ 0.86
TNFAIP3-207ENST00000614035 CHMP4BP1P59074 171 aa20.41■□□□□ 0.86
TNFAIP3-207ENST00000614035 CELF3Q5SZQ8 465 aaKnown RBP20.41■□□□□ 0.86
TNFAIP3-207ENST00000614035 MYSM1Q5VVJ2 828 aa20.41■□□□□ 0.86
TNFAIP3-207ENST00000614035 GDF6Q6KF10 455 aaPredicted RBP20.41■□□□□ 0.86
TNFAIP3-207ENST00000614035 DEFB128Q7Z7B8 93 aa20.41■□□□□ 0.86
TNFAIP3-207ENST00000614035 CAGE1Q8TC20 777 aa20.41■□□□□ 0.86
TNFAIP3-207ENST00000614035 LZTS2Q9BRK4 669 aa20.41■□□□□ 0.86
TNFAIP3-207ENST00000614035 MYL10Q9BUA6 226 aa20.41■□□□□ 0.86
TNFAIP3-207ENST00000614035 HAS3O00219 553 aa20.4■□□□□ 0.86
TNFAIP3-207ENST00000614035 PPFIA4O75335 1185 aa20.4■□□□□ 0.86
TNFAIP3-207ENST00000614035 LIFRP42702 1097 aa20.4■□□□□ 0.86
TNFAIP3-207ENST00000614035 GNAQP50148 359 aa20.4■□□□□ 0.86
TNFAIP3-207ENST00000614035 RBL2Q08999 1139 aa20.4■□□□□ 0.86
TNFAIP3-207ENST00000614035 COL9A3Q14050 684 aaPredicted RBP20.4■□□□□ 0.86
TNFAIP3-207ENST00000614035 CREB3L3Q68CJ9 461 aa20.4■□□□□ 0.86
TNFAIP3-207ENST00000614035 CENPQQ7L2Z9 268 aaPredicted RBP20.4■□□□□ 0.86
TNFAIP3-207ENST00000614035 CCDC155Q8N6L0 562 aa20.4■□□□□ 0.86
TNFAIP3-207ENST00000614035 RRP36Q96EU6 259 aaKnown RBP20.4■□□□□ 0.86
TNFAIP3-207ENST00000614035 GTF2IRD1Q9UHL9 959 aa20.4■□□□□ 0.86
TNFAIP3-207ENST00000614035 YBX2Q9Y2T7 364 aaKnown RBP20.4■□□□□ 0.86
TNFAIP3-207ENST00000614035 CHD7Q9P2D1 2997 aa20.39■□□□□ 0.86
TNFAIP3-207ENST00000614035 STAM2O75886 525 aa20.39■□□□□ 0.85
TNFAIP3-207ENST00000614035 GGPS1O95749 300 aa20.39■□□□□ 0.85
TNFAIP3-207ENST00000614035 ZNF286BP0CG31 522 aa20.39■□□□□ 0.85
TNFAIP3-207ENST00000614035 ACTN1P12814 892 aa20.39■□□□□ 0.85
TNFAIP3-207ENST00000614035 UBA1P22314 1058 aaKnown RBP20.39■□□□□ 0.85
TNFAIP3-207ENST00000614035 PSEN2P49810 448 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms